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GUK1
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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:442.0 nTPM
FANTOM5:313.0 Scaled Tags Per Million
Pig:87.4 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA048587
Glial cells Low
Neuronal cells Medium



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 442.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 442.0
Samples: 246

Max nTPM: 1270.2
Min nTPM: 175.0
Std nTPM: 143.0
Median nTPM: 423.3
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 1270.2
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 1184.5
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 995.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 896.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 881.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 796.1
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 759.6
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 741.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 735.6
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 723.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 723.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 685.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 673.4
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 671.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 668.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 649.0
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 640.0
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 639.8
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 630.5
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 618.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 614.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 611.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 606.5
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 595.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 594.9
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 586.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 585.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 581.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 580.5
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 580.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 578.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 575.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 573.7
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 573.3
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 570.5
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 569.6
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 569.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 563.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 554.9
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 541.7
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 537.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 535.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 531.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 523.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 520.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 518.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 518.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 518.2
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 518.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 517.5
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 515.0
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 513.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 510.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 510.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 508.6
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 507.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 506.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 505.7
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 502.3
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 502.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 497.7
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 497.0
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 492.5
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 491.6
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 489.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 489.7
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 489.2
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 486.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 486.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 484.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 482.9
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 482.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 482.7
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 477.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 476.7
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 475.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 474.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 474.1
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 473.7
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 473.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 472.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 468.7
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 468.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 466.3
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 463.5
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 462.4
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 462.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 460.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 458.4
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 456.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 456.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 454.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 454.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 453.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 453.3
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 452.2
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 451.8
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 450.0
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 447.9
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 447.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 443.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 443.5
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 442.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 438.1
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 438.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 437.1
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 436.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 435.8
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 435.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 434.9
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 434.4
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 434.2
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 433.1
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 433.1
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 429.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 428.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 427.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 427.1
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 427.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 427.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 426.1
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 425.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 423.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 423.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 421.1
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 419.7
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 419.4
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 418.7
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 417.6
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 416.4
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 414.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 413.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 412.5
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 411.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 411.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 410.7
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 408.9
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 408.8
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 407.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 405.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 404.5
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 404.3
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 404.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 404.2
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 403.1
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 402.6
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 401.0
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 399.2
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 396.5
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 396.2
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 395.5
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 394.1
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 393.6
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 393.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 393.0
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 392.8
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 392.6
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 391.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 389.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 388.8
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 387.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 383.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 382.8
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 382.8
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 382.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 381.3
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 380.4
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 380.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 378.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 377.5
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 375.5
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 375.2
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 374.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 371.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 370.1
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 367.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 367.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 366.1
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 365.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 365.7
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 362.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 361.2
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 361.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 359.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 357.5
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 357.4
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 357.1
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 352.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 352.0
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 351.9
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 351.0
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 349.0
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 347.0
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 345.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 340.7
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 335.7
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 334.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 334.0
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 332.6
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 332.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 332.3
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 331.4
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 330.0
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 329.0
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 328.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 325.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 324.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 322.5
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 321.1
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 320.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 317.7
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 314.7
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 313.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 309.7
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 308.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 307.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 303.5
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 301.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 301.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 300.9
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 300.6
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 297.5
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 296.0
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 295.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 285.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 283.2
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 279.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 279.0
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 277.4
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 277.0
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 276.1
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 266.5
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 264.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 260.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 256.4
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 249.1
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 243.3
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 242.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 233.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 228.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 224.5
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 213.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 201.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 201.4
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 199.0
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 175.0
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 313.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 313.0
FF:10164-103B2 76 years, female 313.0

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 87.4
Pig sample Sample description nTPM
Caudate
nTPM: 87.4
Samples: 4

Max nTPM: 111.2
Min nTPM: 72.6
Sample A Female 73.1
Sample B Female 92.7
Sample C Male 111.2
Sample D Male 72.6

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