COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Not detected
Glandular cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:61.4 nTPM
HPA:43.4 nTPM
GTEx:61.4 nTPM
FANTOM5:98.1 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA049840Antibody HPA062236
Endothelial cells Not detectedNot detected
Glandular cells MediumHigh




COLON - HPA RNA-seqi
Average nTPM 43.4
overview
Male, age 54 		Colon sample 67
nTPM: 42.1
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 32.7
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 44.7
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 31.1
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 18.9
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 43.4
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 49.7
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 51.5
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 57
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 63.2
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 47.5
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 42.6
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 39.4
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 61.4
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 61.4
Samples: 373

Max nTPM: 166.7
Min nTPM: 14.1
Std nTPM: 18.7
Median nTPM: 60.9
GTEX-12WSM-1426-SM-5GCPA 60-69 years, male 166.7
GTEX-Y9LG-1326-SM-4VBQB 30-39 years, male 125.7
GTEX-1J8Q3-2426-SM-CL53S 60-69 years, male 116.3
GTEX-11P7K-1826-SM-5HL5A 30-39 years, male 112.0
GTEX-13RTJ-1926-SM-5YYA2 60-69 years, male 107.8
GTEX-139UW-2326-SM-5KM1Y 60-69 years, male 101.6
GTEX-ZXES-1726-SM-5E43G 30-39 years, female 101.6
GTEX-1K2DA-1626-SM-CGQGB 50-59 years, male 101.0
GTEX-111YS-1826-SM-5GIEP 60-69 years, male 100.3
GTEX-1I1CD-2826-SM-A9SL4 60-69 years, female 99.9
GTEX-11ZU8-1126-SM-5EQ5K 60-69 years, male 99.8
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Colon - Transverse
Average nTPM: 43.7
Samples: 406

Max nTPM: 148.3
Min nTPM: 15.4
Std nTPM: 17.3
Median nTPM: 39.3
GTEX-WEY5-1426-SM-4LMJ3 40-49 years, female 148.3
GTEX-14PJ5-0926-SM-6LLIK 60-69 years, female 109.3
GTEX-13O61-1626-SM-5KM3T 60-69 years, male 98.8
GTEX-WY7C-1626-SM-4ONC8 50-59 years, male 95.1
GTEX-13CF3-1426-SM-5K7YY 60-69 years, female 93.6
GTEX-13FH7-1526-SM-5J2N6 50-59 years, female 93.6
GTEX-111YS-1626-SM-5GZZ9 60-69 years, male 93.5
GTEX-16NGA-1026-SM-7KFS3 40-49 years, female 92.0
GTEX-1CB4I-2226-SM-7P8SL 50-59 years, male 91.9
GTEX-14ICL-1226-SM-5S2RD 30-39 years, male 90.1
GTEX-Y8LW-1226-SM-4WWDP 50-59 years, female 88.8
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 98.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 98.1
FF:10014-101C5 62,83,84 years, mixed 98.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.