HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:67.4 nTPM
HPA:67.4 nTPM
GTEx:93.9 nTPM
FANTOM5:117.1 Scaled Tags Per Million
Pig:121.6 nTPM
Mouse:204.2 nTPM
Allen mouse:15.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA038759Antibody HPA040515Antibody HPA045924
Glial cells LowLowLow
Neuronal cells Not detectedLowMedium







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 67.4
Sample id Sample description nTPM
Hippocampus
nTPM: 61.9
1898 Male, age 80, left hemisphere 67.9
2621 Female, age 67, right hemisphere 65.6
1855 Male, age 76, left hemisphere 63.1
1911 Female, age 85, right hemisphere 59.6
2148 Female, age 91, left hemisphere 57.5
2529 Female, age 94, left hemisphere 57.4
Dentate gyrus
nTPM: 60.4
2530 Female, age 94, left hemisphere 73.5
2010 Male, age 76, both hemispheres 64.7
2246 Female, age 85, both hemispheres 57.9
2528 Male, age 74, both hemispheres 57.2
1927 Female, age 91, both hemispheres 55.6
2531 Female, age 67, both hemispheres 53.6
Entorhinal gyrus
nTPM: 67.4
2613 Female, age 94, left hemisphere 74.8
2117 Female, age 91, right hemisphere 72.3
2764 Male, age 80, right hemisphere 71.4
1938 Female, age 85, left hemisphere 66.8
1787 Male, age 76, left hemisphere 61.6
2686 Male, age 75, right hemisphere 57.5
Hippocampus, CA1
nTPM: 59.3
2749 Male, age 80, left hemisphere 73.1
1873 Female, age 85, both hemispheres 62.5
2527 Male, age 74, both hemispheres 55.8
2045 Male, age 76, both hemispheres 54.9
2082 Female, age 91, right hemisphere 50.2
Hippocampus, CA2
nTPM: 59.5
1892 Male, age 76, both hemispheres 67.5
1963 Male, age 80, left hemisphere 64.4
2437 Female, age 94, left hemisphere 61.2
2249 Male, age 74, both hemispheres 57.5
1940 Female, age 85, left hemisphere 53.8
2113 Female, age 91, right hemisphere 52.5
Hippocampus, CA3
nTPM: 59.5
1867 Male, age 76, both hemispheres 64.7
2620 Female, age 94, left hemisphere 63.2
2137 Male, age 80, left hemisphere 62.5
1891 Female, age 85, both hemispheres 61.4
2861 Female, age 67, both hemispheres 57.2
2436 Male, age 74, both hemispheres 48.1
Parahippocampal cortex
nTPM: 60.5
2692 Male, age 74, both hemispheres 65.4
2532 Female, age 72, left hemisphere 64.6
1933 Female, age 85, both hemispheres 62.7
1850 Male, age 80, both hemispheres 62.1
2245 Female, age 91, both hemispheres 61.6
1990 Female, age 91, right hemisphere 61.3
2693 Female, age 94, both hemispheres 59.8
2018 Male, age 76, both hemispheres 58.1
2250 Female, age 67, right hemisphere 56.0
2622 Female, age 67, right hemisphere 53.8
Perirhinal gyrus
nTPM: 59.9
2521 Female, age 94, right hemisphere 61.2
1847 Female, age 91, left hemisphere 60.9
2848 Male, age 76, right hemisphere 60.3
1794 Male, age 80, right hemisphere 58.6
1841 Female, age 85, right hemisphere 58.4
Subiculum
nTPM: 64.2
1901 Male, age 80, both hemispheres 71.2
2042 Male, age 76, both hemispheres 70.4
1977 Female, age 85, both hemispheres 65.1
2619 Male, age 74, both hemispheres 64.9
2438 Female, age 94, left hemisphere 63.3
2729 Female, age 91, right hemisphere 50.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 93.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 93.9
Samples: 197

Max nTPM: 177.7
Min nTPM: 49.4
Std nTPM: 22.3
Median nTPM: 91.1
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 177.7
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 164.1
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 155.4
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 150.0
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 142.1
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 140.4
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 135.2
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 131.2
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 130.3
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 128.7
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 128.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 117.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 117.1
FF:10153-102I9 76 years, female 123.2
FF:10169-103B7 60 years, female 110.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 121.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 121.6
Samples: 4

Max nTPM: 158.6
Min nTPM: 81.4
Sample A Female 158.6
Sample B Female 119.7
Sample C Male 126.7
Sample D Male 81.4
Entorhinal cortex
nTPM: 101.6
Samples: 4

Max nTPM: 111.7
Min nTPM: 91.8
Sample A Female 109.6
Sample B Female 91.8
Sample C Male 111.7
Sample D Male 93.2
Subiculum
nTPM: 108.5
Samples: 4

Max nTPM: 139.9
Min nTPM: 93.1
Sample A Female 139.9
Sample B Female 96.3
Sample C Male 104.8
Sample D Male 93.1
Ventral hippocampus
nTPM: 111.6
Samples: 4

Max nTPM: 136.5
Min nTPM: 75.5
Sample A Female 120.7
Sample B Female 75.5
Sample C Male 136.5
Sample D Male 113.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 204.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 204.3
Samples: 4

Max nTPM: 217.9
Min nTPM: 198.7
Sample A Male 198.7
Sample B Male 201.1
Sample C Female 199.3
Sample D Female 217.9
Hippocampal formation
nTPM: 200.4
Samples: 4

Max nTPM: 208.0
Min nTPM: 196.3
Sample A Male 198.9
Sample B Male 198.5
Sample C Female 208.0
Sample D Female 196.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 15.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 15.2
71495807 Antisense, RP_050913_03_F04, Mouse strain C57BL/6J (56 days, male) 15.2

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