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TISSUE PRIMARY DATA SPINAL CORD Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
SPINAL CORD - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:29.6 nTPM
HPA:29.6 nTPM
GTEx:29.7 nTPM

SPINAL CORD - HPA Brain RNA-seq
Max nTPM 29.6
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 29.6
1981 Female, age 72, midline 33.9
2048 Male, age 55, midline 31.3
2816 Male, age 47, midline 28.0
2194 Female, age 79, both hemispheres 27.7
2565 Male, age 75, midline 26.8
Cervical spinal cord, dorsal horn
nTPM: 26.8
2173 Female, age 72, unknown 34.6
2296 Male, age 66, both hemispheres 28.4
2069 Male, age 47, both hemispheres 27.3
1877 Male, age 55, unknown 24.6
2721 Male, age 90, both hemispheres 24.0
2297 Male, age 75, both hemispheres 22.1
Cervical spinal cord, ventral horn
nTPM: 27.7
2098 Female, age 72, unknown 34.9
2295 Male, age 66, both hemispheres 29.2
2809 Male, age 90, both hemispheres 27.5
2068 Male, age 55, unknown 26.5
2820 Female, age 79, both hemispheres 24.5
2480 Male, age 75, both hemispheres 23.6

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 29.7
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 29.7
Samples: 159

Max nTPM: 50.4
Min nTPM: 12.0
Std nTPM: 6.8
Median nTPM: 29.1
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 50.4
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 49.7
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 47.9
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 47.8
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 46.8
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 45.6
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 44.1
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 41.6
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 40.9
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 40.7
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 40.2
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 40.0
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 40.0
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 39.7
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 39.6
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 39.1
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 38.3
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 38.2
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 37.7
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 37.4
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 37.2
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 37.0
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 36.7
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 36.0
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 35.8
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 35.7
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 35.6
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 35.1
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 34.8
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 34.8
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 34.1
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 34.1
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 33.9
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 33.7
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 33.7
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 33.4
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 33.3
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 33.2
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 33.1
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 33.0
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 33.0
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 33.0
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 32.9
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 32.8
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 32.8
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 32.8
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 32.7
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 32.5
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 32.4
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 32.3
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 32.3
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 32.2
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 32.2
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 32.2
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 32.1
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 32.0
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 31.9
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 31.8
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 31.5
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 31.4
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 31.3
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 31.0
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 30.9
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 30.8
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 30.8
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 30.7
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 30.5
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 30.5
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 30.5
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 30.3
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 30.1
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 30.0
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 29.9
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 29.9
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 29.6
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 29.5
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 29.2
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 29.2
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 29.1
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 29.1
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 29.0
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 28.9
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 28.9
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 28.8
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 28.8
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 28.7
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 28.6
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 28.6
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 28.5
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 28.4
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 28.3
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 28.2
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 28.1
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 28.1
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 28.0
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 27.9
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 27.9
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 27.7
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 27.6
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 27.6
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 27.5
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 27.5
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 27.1
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 27.0
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 26.9
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 26.8
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 26.8
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 26.7
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 26.5
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 26.5
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 26.5
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 26.3
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 26.0
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 25.9
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 25.8
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 25.8
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 25.7
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 25.6
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 25.6
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 25.5
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 25.3
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 25.3
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 25.0
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 24.7
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 24.4
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 24.2
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 24.2
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 24.1
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 23.9
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 23.9
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 23.7
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 23.7
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 23.6
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 23.3
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 23.2
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 23.2
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 23.0
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 22.9
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 22.8
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 22.4
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 22.4
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 22.3
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 21.5
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 21.5
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 21.3
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 21.3
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 21.2
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 21.1
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 20.0
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 19.2
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 19.0
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 18.9
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 18.3
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 18.3
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 17.5
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 17.4
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 16.4
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 16.2
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 12.0
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