HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:11.8 nTPM
HPA:11.8 nTPM
GTEx:9.8 nTPM
FANTOM5:222.7 Scaled Tags Per Million
Pig:56.0 nTPM
Mouse:110.9 nTPM
Allen mouse:11.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA034755Antibody HPA076725
Glial cells Not detectedNot detected
Neuronal cells MediumMedium




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 11.8
Sample id Sample description nTPM
Hippocampus
nTPM: 0.8
1898 Male, age 80, left hemisphere 4.9
1855 Male, age 76, left hemisphere 0.0
1911 Female, age 85, right hemisphere 0.0
2148 Female, age 91, left hemisphere 0.0
2529 Female, age 94, left hemisphere 0.0
2621 Female, age 67, right hemisphere 0.0
Dentate gyrus
nTPM: 1.3
1927 Female, age 91, both hemispheres 8.0
2010 Male, age 76, both hemispheres 0.0
2246 Female, age 85, both hemispheres 0.0
2528 Male, age 74, both hemispheres 0.0
2530 Female, age 94, left hemisphere 0.0
2531 Female, age 67, both hemispheres 0.0
Entorhinal gyrus
nTPM: 1.8
2764 Male, age 80, right hemisphere 5.3
1938 Female, age 85, left hemisphere 4.3
2613 Female, age 94, left hemisphere 1.6
1787 Male, age 76, left hemisphere 0.0
2117 Female, age 91, right hemisphere 0.0
2686 Male, age 75, right hemisphere 0.0
Hippocampus, CA1
nTPM: 3.9
2749 Male, age 80, left hemisphere 18.7
2045 Male, age 76, both hemispheres 0.6
1873 Female, age 85, both hemispheres 0.4
2082 Female, age 91, right hemisphere 0.0
2527 Male, age 74, both hemispheres 0.0
Hippocampus, CA2
nTPM: 1.6
1892 Male, age 76, both hemispheres 5.9
2249 Male, age 74, both hemispheres 3.9
1940 Female, age 85, left hemisphere 0.0
1963 Male, age 80, left hemisphere 0.0
2113 Female, age 91, right hemisphere 0.0
2437 Female, age 94, left hemisphere 0.0
Hippocampus, CA3
nTPM: 7.3
2436 Male, age 74, both hemispheres 29.7
2137 Male, age 80, left hemisphere 12.6
1867 Male, age 76, both hemispheres 1.5
1891 Female, age 85, both hemispheres 0.0
2620 Female, age 94, left hemisphere 0.0
2861 Female, age 67, both hemispheres 0.0
Parahippocampal cortex
nTPM: 3.3
1850 Male, age 80, both hemispheres 11.8
2693 Female, age 94, both hemispheres 10.5
1990 Female, age 91, right hemisphere 3.8
2245 Female, age 91, both hemispheres 3.5
1933 Female, age 85, both hemispheres 2.6
2250 Female, age 67, right hemisphere 1.1
2018 Male, age 76, both hemispheres 0.0
2532 Female, age 72, left hemisphere 0.0
2622 Female, age 67, right hemisphere 0.0
2692 Male, age 74, both hemispheres 0.0
Perirhinal gyrus
nTPM: 11.8
1847 Female, age 91, left hemisphere 16.2
1794 Male, age 80, right hemisphere 13.5
1841 Female, age 85, right hemisphere 11.9
2848 Male, age 76, right hemisphere 9.2
2521 Female, age 94, right hemisphere 8.1
Subiculum
nTPM: 0.5
1977 Female, age 85, both hemispheres 1.5
1901 Male, age 80, both hemispheres 1.4
2042 Male, age 76, both hemispheres 0.0
2438 Female, age 94, left hemisphere 0.0
2619 Male, age 74, both hemispheres 0.0
2729 Female, age 91, right hemisphere 0.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 9.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 9.8
Samples: 197

Max nTPM: 36.2
Min nTPM: 0.3
Std nTPM: 8.0
Median nTPM: 7.7
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 36.2
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 33.7
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 31.8
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 31.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 31.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 30.5
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 29.4
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 28.2
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 27.5
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 26.8
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 26.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 222.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 222.7
FF:10169-103B7 60 years, female 280.4
FF:10153-102I9 76 years, female 165.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 56.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 56.0
Samples: 4

Max nTPM: 60.1
Min nTPM: 51.3
Sample A Female 53.4
Sample B Female 59.2
Sample C Male 51.3
Sample D Male 60.1
Entorhinal cortex
nTPM: 50.8
Samples: 4

Max nTPM: 55.7
Min nTPM: 45.0
Sample A Female 52.0
Sample B Female 55.7
Sample C Male 45.0
Sample D Male 50.5
Subiculum
nTPM: 50.8
Samples: 4

Max nTPM: 67.9
Min nTPM: 38.0
Sample A Female 67.9
Sample B Female 42.1
Sample C Male 55.0
Sample D Male 38.0
Ventral hippocampus
nTPM: 51.3
Samples: 4

Max nTPM: 66.2
Min nTPM: 43.4
Sample A Female 66.2
Sample B Female 48.2
Sample C Male 47.4
Sample D Male 43.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 110.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 110.9
Samples: 4

Max nTPM: 118.4
Min nTPM: 102.0
Sample A Male 102.0
Sample B Male 118.4
Sample C Female 106.3
Sample D Female 116.7
Hippocampal formation
nTPM: 87.3
Samples: 4

Max nTPM: 94.6
Min nTPM: 77.6
Sample A Male 85.9
Sample B Male 91.2
Sample C Female 77.6
Sample D Female 94.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.8
1923 Antisense, RP_040507_02_H12, Mouse strain C57BL/6J (56 days, male) 11.8
1922 Antisense, RP_040507_02_H12, Mouse strain C57BL/6J (56 days, male) 6.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
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