HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:109.7 nTPM
HPA:109.7 nTPM
GTEx:27.6 nTPM
FANTOM5:42.1 Scaled Tags Per Million
Pig:32.4 nTPM
Mouse:70.5 nTPM
Allen mouse:4.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA034873Antibody HPA034874Antibody HPA065335
Glial cells Not detectedLowLow
Neuronal cells HighMediumNot detected






HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 109.7
Sample id Sample description nTPM
Hippocampus
nTPM: 63.5
1911 Female, age 85, right hemisphere 102.3
2529 Female, age 94, left hemisphere 82.2
2621 Female, age 67, right hemisphere 69.1
1855 Male, age 76, left hemisphere 46.7
2148 Female, age 91, left hemisphere 45.5
1898 Male, age 80, left hemisphere 35.4
Dentate gyrus
nTPM: 66.9
2530 Female, age 94, left hemisphere 92.6
2528 Male, age 74, both hemispheres 74.4
2246 Female, age 85, both hemispheres 71.6
2010 Male, age 76, both hemispheres 65.4
2531 Female, age 67, both hemispheres 55.0
1927 Female, age 91, both hemispheres 42.6
Entorhinal gyrus
nTPM: 60.1
2117 Female, age 91, right hemisphere 83.9
1787 Male, age 76, left hemisphere 71.4
2764 Male, age 80, right hemisphere 64.6
2613 Female, age 94, left hemisphere 64.2
2686 Male, age 75, right hemisphere 42.2
1938 Female, age 85, left hemisphere 34.2
Hippocampus, CA1
nTPM: 53.8
2082 Female, age 91, right hemisphere 79.3
1873 Female, age 85, both hemispheres 71.7
2527 Male, age 74, both hemispheres 57.6
2045 Male, age 76, both hemispheres 38.7
2749 Male, age 80, left hemisphere 21.5
Hippocampus, CA2
nTPM: 70.0
2437 Female, age 94, left hemisphere 88.9
1963 Male, age 80, left hemisphere 82.2
1940 Female, age 85, left hemisphere 76.4
2113 Female, age 91, right hemisphere 74.9
2249 Male, age 74, both hemispheres 70.4
1892 Male, age 76, both hemispheres 27.3
Hippocampus, CA3
nTPM: 50.9
1891 Female, age 85, both hemispheres 133.3
2137 Male, age 80, left hemisphere 48.8
2436 Male, age 74, both hemispheres 43.4
1867 Male, age 76, both hemispheres 36.6
2620 Female, age 94, left hemisphere 36.5
2861 Female, age 67, both hemispheres 6.6
Parahippocampal cortex
nTPM: 57.1
2692 Male, age 74, both hemispheres 92.6
2532 Female, age 72, left hemisphere 89.1
2693 Female, age 94, both hemispheres 71.1
1933 Female, age 85, both hemispheres 68.8
2018 Male, age 76, both hemispheres 59.8
1990 Female, age 91, right hemisphere 57.9
2245 Female, age 91, both hemispheres 42.4
2250 Female, age 67, right hemisphere 39.7
1850 Male, age 80, both hemispheres 36.4
2622 Female, age 67, right hemisphere 13.6
Perirhinal gyrus
nTPM: 35.3
2521 Female, age 94, right hemisphere 42.2
1841 Female, age 85, right hemisphere 39.8
1847 Female, age 91, left hemisphere 32.7
2848 Male, age 76, right hemisphere 31.6
1794 Male, age 80, right hemisphere 30.3
Subiculum
nTPM: 109.7
2042 Male, age 76, both hemispheres 180.4
1901 Male, age 80, both hemispheres 107.0
1977 Female, age 85, both hemispheres 97.2
2438 Female, age 94, left hemisphere 96.8
2729 Female, age 91, right hemisphere 89.7
2619 Male, age 74, both hemispheres 87.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 27.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 27.6
Samples: 197

Max nTPM: 49.1
Min nTPM: 18.7
Std nTPM: 4.6
Median nTPM: 27.0
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 49.1
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 43.1
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 42.6
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 40.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 38.9
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 37.7
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 37.6
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 37.4
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 37.1
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 36.8
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 36.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 42.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 42.1
FF:10153-102I9 76 years, female 45.4
FF:10169-103B7 60 years, female 38.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 32.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 32.4
Samples: 4

Max nTPM: 38.1
Min nTPM: 27.9
Sample A Female 38.1
Sample B Female 33.0
Sample C Male 30.7
Sample D Male 27.9
Entorhinal cortex
nTPM: 30.0
Samples: 4

Max nTPM: 32.9
Min nTPM: 26.3
Sample A Female 31.3
Sample B Female 32.9
Sample C Male 29.4
Sample D Male 26.3
Subiculum
nTPM: 27.0
Samples: 4

Max nTPM: 31.8
Min nTPM: 24.8
Sample A Female 31.8
Sample B Female 24.8
Sample C Male 25.2
Sample D Male 26.2
Ventral hippocampus
nTPM: 28.6
Samples: 4

Max nTPM: 33.3
Min nTPM: 24.4
Sample A Female 33.3
Sample B Female 25.6
Sample C Male 24.4
Sample D Male 31.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 70.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 64.5
Samples: 4

Max nTPM: 67.9
Min nTPM: 60.9
Sample A Male 62.9
Sample B Male 67.9
Sample C Female 66.2
Sample D Female 60.9
Hippocampal formation
nTPM: 70.5
Samples: 4

Max nTPM: 76.8
Min nTPM: 65.6
Sample A Male 76.8
Sample B Male 68.8
Sample C Female 70.9
Sample D Female 65.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.7
413804 Antisense, RP_040809_01_F03, Mouse strain C57BL/6J (56 days, male) 4.7

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