AMYGDALA - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:91.0 nTPM
HPA:91.0 nTPM
GTEx:80.7 nTPM
FANTOM5:170.3 Scaled Tags Per Million
Pig:37.5 nTPM
Mouse:191.7 nTPM
Allen mouse:20.1 Expression energy

AMYGDALA - HPA Brain RNA-seq
Max nTPM 91.0
Sample id Sample description nTPM
Amygdala
nTPM: 91.0
2814 Male, age 76, right hemisphere 102.4
2514 Male, age 75, right hemisphere 95.8
1987 Female, age 91, left hemisphere 89.0
2517 Female, age 94, left hemisphere 84.8
2695 Female, age 67, right hemisphere 83.1
Basal amygdala
nTPM: 80.8
1955 Male, age 76, both hemispheres 87.7
2110 Male, age 80, left hemisphere 85.3
2609 Male, age 75, right hemisphere 83.3
2685 Female, age 94, left hemisphere 80.6
2243 Female, age 91, right hemisphere 78.4
2827 Female, age 67, right hemisphere 69.6
Central amygdala
nTPM: 85.8
1905 Male, age 76, both hemispheres 96.8
2515 Male, age 75, right hemisphere 86.0
2239 Male, age 80, left hemisphere 82.7
2826 Female, age 94, left hemisphere 82.4
2701 Female, age 91, right hemisphere 81.1
Corticomedial amygdala
nTPM: 82.9
2240 Male, age 76, both hemispheres 87.9
2428 Male, age 75, right hemisphere 87.5
2429 Female, age 94, left hemisphere 86.5
2829 Male, age 80, left hemisphere 85.2
2242 Female, age 91, right hemisphere 80.0
2535 Female, age 67, right hemisphere 70.5
Lateral amygdala
nTPM: 82.3
1883 Male, age 76, both hemispheres 96.1
2534 Female, age 94, left hemisphere 86.1
2516 Male, age 75, right hemisphere 85.9
2256 Male, age 80, left hemisphere 78.9
2255 Female, age 91, right hemisphere 75.1
2830 Female, age 67, right hemisphere 71.5
Stria terminalis, bed nucleus
nTPM: 83.8
1974 Female, age 91, both hemispheres 87.3
2486 Female, age 94, both hemispheres 83.7
2201 Male, age 74, unknown 80.4

AMYGDALA - GTEx RNA-seqi
Average nTPM 80.7
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 80.7
Samples: 152

Max nTPM: 144.1
Min nTPM: 36.5
Std nTPM: 18.5
Median nTPM: 79.5
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 144.1
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 134.6
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 132.5
GTEX-14E7W-0011-R4b-SM-62LEA 70-79 years, male 126.4
GTEX-147GR-0011-R4a-SM-5S2V2 60-69 years, male 126.1
GTEX-XLM4-0011-R4B-SM-4AT5C 60-69 years, male 118.1
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 117.5
GTEX-T6MN-0011-R4A-SM-32QPG 50-59 years, male 115.3
GTEX-1F48J-0011-R4b-SM-9OSVX 50-59 years, female 113.7
GTEX-14JFF-0011-R4a-SM-5ZZV5 60-69 years, male 113.1
GTEX-12WSH-0011-R4a-SM-5GU6K 50-59 years, male 112.6
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 170.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 170.3
FF:10151-102I7 76 years, female 170.3

AMYGDALA - Pig RNA-seqi
Average nTPM 37.5
Pig sample Sample description nTPM
Amygdala
nTPM: 37.5
Samples: 4

Max nTPM: 48.4
Min nTPM: 31.9
Sample A Female 48.4
Sample B Female 31.9
Sample C Male 34.7
Sample D Male 34.9

AMYGDALA - Mouse RNA-seqi
Average nTPM 191.7
Mouse sample Sample description nTPM
Amygdala
nTPM: 191.7
Samples: 4

Max nTPM: 206.4
Min nTPM: 184.7
Sample A Male 187.5
Sample B Male 206.4
Sample C Female 188.1
Sample D Female 184.7

AMYGDALA - Allen Mouse ISHi
Max Expression energy 20.1
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 20.1
512774 Antisense, RP_040809_02_E02, Mouse strain C57BL/6J (56 days, male) 21.4
75651232 Antisense, RP_060518_01_D10, Mouse strain C57BL/6J (56 days, male) 18.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.