HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:91.1 nTPM
HPA:91.1 nTPM
GTEx:80.4 nTPM
FANTOM5:169.1 Scaled Tags Per Million
Pig:57.8 nTPM
Mouse:205.3 nTPM
Allen mouse:17.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA015540Antibody CAB019321
Glial cells LowLow
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 91.1
Sample id Sample description nTPM
Hippocampus
nTPM: 84.5
1898 Male, age 80, left hemisphere 95.0
2529 Female, age 94, left hemisphere 86.7
2621 Female, age 67, right hemisphere 84.0
1911 Female, age 85, right hemisphere 81.0
1855 Male, age 76, left hemisphere 80.8
2148 Female, age 91, left hemisphere 79.7
Dentate gyrus
nTPM: 84.6
1927 Female, age 91, both hemispheres 88.5
2530 Female, age 94, left hemisphere 86.7
2528 Male, age 74, both hemispheres 86.2
2010 Male, age 76, both hemispheres 84.6
2246 Female, age 85, both hemispheres 83.0
2531 Female, age 67, both hemispheres 78.3
Entorhinal gyrus
nTPM: 82.3
2117 Female, age 91, right hemisphere 87.0
1938 Female, age 85, left hemisphere 85.6
1787 Male, age 76, left hemisphere 83.4
2764 Male, age 80, right hemisphere 83.2
2613 Female, age 94, left hemisphere 79.7
2686 Male, age 75, right hemisphere 75.1
Hippocampus, CA1
nTPM: 84.4
1873 Female, age 85, both hemispheres 90.1
2527 Male, age 74, both hemispheres 85.5
2749 Male, age 80, left hemisphere 84.8
2082 Female, age 91, right hemisphere 81.2
2045 Male, age 76, both hemispheres 80.2
Hippocampus, CA2
nTPM: 88.0
2249 Male, age 74, both hemispheres 92.0
1892 Male, age 76, both hemispheres 91.5
1963 Male, age 80, left hemisphere 90.2
1940 Female, age 85, left hemisphere 88.1
2437 Female, age 94, left hemisphere 85.2
2113 Female, age 91, right hemisphere 80.8
Hippocampus, CA3
nTPM: 81.3
1891 Female, age 85, both hemispheres 86.9
2436 Male, age 74, both hemispheres 85.9
1867 Male, age 76, both hemispheres 82.0
2137 Male, age 80, left hemisphere 80.0
2620 Female, age 94, left hemisphere 79.2
2861 Female, age 67, both hemispheres 73.9
Parahippocampal cortex
nTPM: 84.4
1850 Male, age 80, both hemispheres 96.0
2250 Female, age 67, right hemisphere 88.6
1990 Female, age 91, right hemisphere 87.9
1933 Female, age 85, both hemispheres 85.8
2693 Female, age 94, both hemispheres 84.8
2532 Female, age 72, left hemisphere 83.6
2245 Female, age 91, both hemispheres 82.3
2018 Male, age 76, both hemispheres 81.1
2692 Male, age 74, both hemispheres 79.6
2622 Female, age 67, right hemisphere 73.9
Perirhinal gyrus
nTPM: 91.1
1841 Female, age 85, right hemisphere 94.6
1794 Male, age 80, right hemisphere 94.3
2521 Female, age 94, right hemisphere 90.7
1847 Female, age 91, left hemisphere 90.1
2848 Male, age 76, right hemisphere 85.8
Subiculum
nTPM: 83.3
2438 Female, age 94, left hemisphere 86.2
1977 Female, age 85, both hemispheres 85.8
1901 Male, age 80, both hemispheres 85.1
2729 Female, age 91, right hemisphere 82.7
2619 Male, age 74, both hemispheres 81.2
2042 Male, age 76, both hemispheres 79.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 80.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 80.4
Samples: 197

Max nTPM: 187.1
Min nTPM: 31.2
Std nTPM: 19.0
Median nTPM: 77.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 187.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 135.7
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 129.1
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 124.2
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 121.8
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 120.1
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 119.5
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 115.4
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 113.5
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 113.3
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 112.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 169.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 169.1
FF:10153-102I9 76 years, female 182.4
FF:10169-103B7 60 years, female 155.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 57.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 54.5
Samples: 4

Max nTPM: 68.4
Min nTPM: 42.2
Sample A Female 68.4
Sample B Female 60.2
Sample C Male 47.2
Sample D Male 42.2
Entorhinal cortex
nTPM: 57.9
Samples: 4

Max nTPM: 60.2
Min nTPM: 52.1
Sample A Female 59.6
Sample B Female 59.5
Sample C Male 60.2
Sample D Male 52.1
Subiculum
nTPM: 52.7
Samples: 4

Max nTPM: 69.0
Min nTPM: 47.1
Sample A Female 69.0
Sample B Female 47.5
Sample C Male 47.1
Sample D Male 47.3
Ventral hippocampus
nTPM: 49.2
Samples: 4

Max nTPM: 55.2
Min nTPM: 36.0
Sample A Female 55.2
Sample B Female 36.0
Sample C Male 55.1
Sample D Male 50.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 205.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 202.6
Samples: 4

Max nTPM: 210.4
Min nTPM: 196.4
Sample A Male 201.2
Sample B Male 210.4
Sample C Female 202.3
Sample D Female 196.4
Hippocampal formation
nTPM: 205.3
Samples: 4

Max nTPM: 221.5
Min nTPM: 191.8
Sample A Male 221.5
Sample B Male 191.8
Sample C Female 207.6
Sample D Female 200.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 17.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 17.2
75651232 Antisense, RP_060518_01_D10, Mouse strain C57BL/6J (56 days, male) 18.1
512774 Antisense, RP_040809_02_E02, Mouse strain C57BL/6J (56 days, male) 16.3

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