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TAGLN3
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BRAIN CEREBELLUM Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Cerebellum
CEREBELLUM - Expression summary
Protein expression
Cerebellumi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Bergmann glia - cytoplasm/membrane: Not detected
Bergmann glia - nucleus: Not detected
GLUC cells - cytoplasm/membrane: Not detected
GLUC cells - nucleus: Not detected
Granular cells - cytoplasm/membrane: Not detected
Granular cells - nucleus: Not detected
Molecular layer - neuropil: Low
Molecular layer cells - cytoplasm/membrane: Not detected
Molecular layer cells - nucleus: Not detected
Processes in granular layer: Not detected
Processes in molecular layer: Not detected
Processes in white matter: Not detected
Purkinje cells - cytoplasm/membrane: Not detected
Purkinje cells - dendrites: Not detected
Purkinje cells - nucleus: Not detected
Synaptic glomeruli - capsule: Not detected
Synaptic glomeruli - core: High
White matter cells - cytoplasm/membrane: Not detected
White matter cells - nucleus: Not detected
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:250.3 nTPM
HPA:250.3 nTPM
GTEx:293.6 nTPM
FANTOM5:188.9 Scaled Tags Per Million
Pig:209.3 nTPM
Mouse:675.5 nTPM
Allen mouse:4.7 Expression energy

CEREBELLUM - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA062620
Bergmann glia - cytoplasm/membrane Not detected
Bergmann glia - nucleus Not detected
GLUC cells - cytoplasm/membrane Not detected
GLUC cells - nucleus Not detected
Purkinje cells - cytoplasm/membrane Not detected
Purkinje cells - dendrites Not detected
Purkinje cells - nucleus Not detected
Granular cells - cytoplasm/membrane Not detected
Granular cells - nucleus Not detected
Molecular layer - neuropil Low
Molecular layer cells - cytoplasm/membrane Not detected
Molecular layer cells - nucleus Not detected
Processes in granular layer Not detected
Processes in molecular layer Not detected
Processes in white matter Not detected
Synaptic glomeruli - capsule Not detected
Synaptic glomeruli - core High
White matter cells - cytoplasm/membrane Not detected
White matter cells - nucleus Not detected


CEREBELLUM - HPA Brain RNA-seq
Max nTPM 250.3
Sample id Sample description nTPM
Cerebellar cortex
nTPM: 250.3
2101 Male, age 74, right hemisphere 363.3
2006 Male, age 61, right hemisphere 265.0
1768 Female, age 72, unknown 259.2
2055 Female, age 91, right hemisphere 250.2
1774 Male, age 80, left hemisphere 241.7
1788 Male, age 55, unknown 213.3
1769 Male, age 76, right hemisphere 211.9
2003 Female, age 85, right hemisphere 198.3
Cerebellar nuclei
nTPM: 217.1
2318 Male, age 74, left hemisphere 247.8
2783 Female, age 72, unknown 242.3
2177 Female, age 85, both hemispheres 231.2
2882 Male, age 76, left hemisphere 216.1
1879 Male, age 55, unknown 210.0
1966 Female, age 91, left hemisphere 207.5
2175 Male, age 61, right hemisphere 202.5
2005 Male, age 80, left hemisphere 199.6
1871 Male, age 74, unknown 197.0
Flocculonodular lobe
nTPM: 235.2
2004 Male, age 61, right hemisphere 281.9
1771 Male, age 80, left hemisphere 248.8
2176 Female, age 91, right hemisphere 247.2
1835 Female, age 85, right hemisphere 224.6
1792 Male, age 74, unknown 223.7
1767 Male, age 76, left hemisphere 211.2
1765 Male, age 55, unknown 209.4
Vermis
nTPM: 236.9
1751 Male, age 74, right hemisphere 327.4
1928 Female, age 72, unknown 251.9
1778 Female, age 91, left hemisphere 243.2
2834 Male, age 80, left hemisphere 239.3
1988 Female, age 85, left hemisphere 224.5
1825 Male, age 74, unknown 216.0
1766 Male, age 55, unknown 212.9
1770 Male, age 76, left hemisphere 212.4
2460 Male, age 61, both hemispheres 204.7

CEREBELLUM - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 293.6
GTEx sample id Sample description nTPM
Brain - Cerebellar Hemisphere
Average nTPM: 293.6
Samples: 215

Max nTPM: 552.5
Min nTPM: 124.4
Std nTPM: 57.0
Median nTPM: 291.6
GTEX-1F75W-0011-R11b-SM-AHZ34 60-69 years, male 552.5
GTEX-12WSD-0011-R11a-SM-9OSVC 60-69 years, female 434.6
GTEX-17EVP-0011-R11a-SM-7EWDL 40-49 years, male 432.4
GTEX-131XW-0011-R11a-SM-5DUV9 50-59 years, female 428.1
GTEX-1B933-0011-R11a-SM-7P8PM 50-59 years, female 414.8
GTEX-ZF28-0011-R11a-SM-4WWEI 60-69 years, male 413.1
GTEX-12WSC-0011-R11a-SM-5GU5J 50-59 years, male 406.7
GTEX-17EVQ-0011-R11a-SM-7LT9C 70-79 years, male 402.9
GTEX-1R9K4-0011-R11a-SM-EZ6N9 60-69 years, male 402.0
GTEX-132Q8-0011-R11b-SM-5DUW9 60-69 years, male 399.4
GTEX-NL4W-0011-R11A-SM-2I3DW 50-59 years, male 399.2
GTEX-1B8SG-0011-R11a-SM-7P8PF 50-59 years, male 397.1
GTEX-1H4P4-0011-R11b-SM-CE6S8 50-59 years, male 396.6
GTEX-11EI6-0011-R11a-SM-DO11V 60-69 years, male 386.7
GTEX-12WSH-0011-R11a-SM-5LZVM 50-59 years, male 382.2
GTEX-1JJ6O-0011-R11b-SM-EXUS2 60-69 years, male 376.4
GTEX-11DZ1-0011-R11b-SM-DO11W 50-59 years, male 374.3
GTEX-13X6J-0011-R11a-SM-5P9HE 50-59 years, male 373.1
GTEX-N7MT-0011-R11A-SM-2I3DZ 60-69 years, female 373.1
GTEX-16Z82-0011-R11a-SM-79OKJ 60-69 years, male 370.7
GTEX-11ZUS-0011-R11b-SM-5BC7B 30-39 years, male 369.5
GTEX-11WQC-0011-R11b-SM-57WD6 60-69 years, male 366.4
GTEX-17JCI-0011-R11a-SM-7189Y 60-69 years, female 362.6
GTEX-ZE7O-0011-R11a-SM-57WBC 50-59 years, female 360.5
GTEX-X261-0011-R11A-SM-4E3JY 50-59 years, male 358.7
GTEX-1I19N-0011-R11b-SM-ARU6Y 70-79 years, male 358.1
GTEX-17HII-0011-R11b-SM-7KFSX 50-59 years, male 355.9
GTEX-N7MS-0011-R11A-SM-2HMJS 60-69 years, male 353.8
GTEX-1IOXB-0011-R11a-SM-A9G1X 50-59 years, male 352.4
GTEX-13QIC-0011-R11b-SM-5O9BU 60-69 years, female 350.4
GTEX-1J8Q2-0011-R11a-SM-A9SKI 60-69 years, male 350.2
GTEX-1GZHY-0011-R11a-SM-C1YRQ 50-59 years, female 348.7
GTEX-ZVT3-0011-R11b-SM-57WBI 60-69 years, female 344.3
GTEX-13X6I-0011-R11a-SM-5P9HN 60-69 years, male 343.9
GTEX-144GL-0011-R11b-SM-5P9F6 50-59 years, male 342.9
GTEX-11EMC-0011-R11b-SM-DNZZK 60-69 years, female 342.0
GTEX-NL3H-0011-R11A-SM-2I3E6 60-69 years, male 341.0
GTEX-145MH-0011-R11a-SM-5P9HQ 50-59 years, male 339.8
GTEX-1CAV2-0011-R11a-SM-ARU8D 40-49 years, female 339.8
GTEX-1IGQW-0011-R11a-SM-C1YRV 60-69 years, male 338.3
GTEX-14ASI-0011-R11b-SM-6AJBJ 60-69 years, male 338.0
GTEX-13FLV-0011-R11a-SM-5LZZ7 50-59 years, male 337.8
GTEX-11ZTS-0011-R11a-SM-DO113 60-69 years, female 337.8
GTEX-1KD4Q-0011-R11b-SM-EXOIE 40-49 years, male 336.3
GTEX-12WSI-0011-R11b-SM-5P9EZ 50-59 years, male 336.2
GTEX-1GMRU-0011-R11b-SM-C1YQ4 50-59 years, male 334.6
GTEX-1313W-0011-R11a-SM-5DUXN 50-59 years, female 333.8
GTEX-1I1GV-0011-R11a-SM-CJI3Z 60-69 years, male 332.7
GTEX-12ZZZ-0011-R11a-SM-5EGLC 60-69 years, male 332.2
GTEX-139TT-0011-R11b-SM-5LZV1 60-69 years, male 329.5
GTEX-1F52S-0011-R11a-SM-CJI23 60-69 years, female 327.8
GTEX-13JUV-0011-R11a-SM-5LZYH 40-49 years, female 327.7
GTEX-ZE9C-0011-R11a-SM-4WKGG 60-69 years, male 327.4
GTEX-14PN4-0011-R11a-SM-686ZW 50-59 years, male 326.7
GTEX-15CHQ-0011-R11b-SM-686ZZ 60-69 years, male 326.6
GTEX-1H1CY-0011-R11a-SM-C1YQR 60-69 years, female 324.2
GTEX-16YQH-0011-R11b-SM-7LT98 30-39 years, male 324.1
GTEX-1F7RK-0011-R11b-SM-9QEI2 20-29 years, female 324.1
GTEX-1C64N-0011-R11b-SM-7P8Q6 50-59 years, male 323.8
GTEX-YJ89-0011-R11a-SM-4SOKA 60-69 years, male 321.6
GTEX-1F6I4-0011-R11b-SM-9OSWS 60-69 years, male 320.2
GTEX-12126-0011-R11a-SM-5BC6X 20-29 years, male 319.8
GTEX-13NZA-0011-R11b-SM-5KM4W 60-69 years, male 319.8
GTEX-1HGF4-0011-R11a-SM-C1YRR 60-69 years, male 319.4
GTEX-139UW-0011-R11a-SM-5IJGN 60-69 years, male 319.3
GTEX-1LG7Y-0011-R11a-SM-EXOIH 50-59 years, male 317.8
GTEX-13FTY-0011-R11a-SM-5IJEA 40-49 years, female 317.3
GTEX-NPJ8-0011-R11A-SM-2YUMS 40-49 years, male 315.8
GTEX-WL46-0011-R11A-SM-3MJFT 50-59 years, male 315.6
GTEX-13CZV-0011-R11b-SM-5N9FN 60-69 years, male 315.5
GTEX-1H3VE-0011-R11b-SM-C1YRP 40-49 years, male 314.1
GTEX-15G19-0011-R11b-SM-6LPIH 60-69 years, male 312.1
GTEX-1HBPI-0011-R11b-SM-CE6SH 50-59 years, male 311.9
GTEX-18A6Q-0011-R11a-SM-72D6H 60-69 years, male 311.2
GTEX-ZDXO-0011-R11a-SM-4WWD9 60-69 years, male 310.0
GTEX-ZVZQ-0011-R11a-SM-51MS6 60-69 years, female 309.1
GTEX-13SLW-0011-R11a-SM-5SI8Q 70-79 years, male 308.2
GTEX-13G51-0011-R11b-SM-5J2NE 60-69 years, male 307.6
GTEX-1JJEA-0011-R11a-SM-EXUTE 60-69 years, male 306.9
GTEX-1GF9W-0011-R11b-SM-9OSXG 60-69 years, male 306.8
GTEX-13OW7-0011-R11a-SM-5O9DY 50-59 years, male 306.7
GTEX-1GZ4I-0011-R11b-SM-9OSWR 50-59 years, male 305.8
GTEX-13S7M-0011-R11b-SM-5P9HU 60-69 years, female 304.9
GTEX-1F75A-0011-R11a-SM-AHZ35 50-59 years, male 304.2
GTEX-1I1GR-0011-R11a-SM-CM2T5 60-69 years, male 304.2
GTEX-1HCU6-0011-R11b-SM-AHZ2F 60-69 years, female 303.1
GTEX-13OVH-0011-R11b-SM-5KM4X 70-79 years, male 302.7
GTEX-11PRG-0011-R11b-SM-DNZZY 50-59 years, male 302.5
GTEX-1I1GQ-0011-R11b-SM-CKZPA 50-59 years, male 302.4
GTEX-16GPK-0011-R11b-SM-7MKFF 60-69 years, male 301.8
GTEX-131XH-0011-R11a-SM-5EGLN 50-59 years, male 300.1
GTEX-WWYW-0011-R11A-SM-3NB38 50-59 years, female 300.1
GTEX-13O3Q-0011-R11b-SM-5KM2W 50-59 years, male 299.4
GTEX-RU72-0011-R11A-SM-CM2U1 50-59 years, female 299.0
GTEX-1IDJH-0011-R11b-SM-C1YRT 70-79 years, male 298.3
GTEX-1M4P7-0011-R11b-SM-EXOIK 60-69 years, male 298.2
GTEX-1EKGG-0011-R11a-SM-9QEHZ 60-69 years, male 298.0
GTEX-14E6D-0011-R11b-SM-664NP 50-59 years, male 297.3
GTEX-1IY9M-0011-R11b-SM-A96TI 60-69 years, male 297.0
GTEX-11DYG-0011-R11a-SM-DNZZP 60-69 years, male 296.8
GTEX-1LKK1-0011-R11a-SM-EXOIG 50-59 years, female 296.8
GTEX-1E1VI-0011-R11a-SM-9OSWI 50-59 years, male 296.2
GTEX-1CB4G-0011-R11a-SM-9OSWG 60-69 years, male 295.7
GTEX-1H3O1-0011-R11a-SM-A96RV 60-69 years, male 295.2
GTEX-T2IS-0011-R11A-SM-32QPC 20-29 years, female 294.1
GTEX-183WM-0011-R11a-SM-718A5 70-79 years, female 293.7
GTEX-1GMR8-0011-R11b-SM-9OSX2 50-59 years, female 293.0
GTEX-Z93S-0011-R11a-SM-4RGNN 50-59 years, male 291.6
GTEX-13O3O-0011-R11b-SM-5KM4G 60-69 years, female 290.5
GTEX-18464-0011-R11a-SM-72D76 50-59 years, male 290.3
GTEX-1HSKV-0011-R11b-SM-AHZ2E 60-69 years, male 290.3
GTEX-14BIM-0011-R11b-SM-5S2RN 60-69 years, female 290.0
GTEX-13PLJ-0011-R11b-SM-5O9BS 60-69 years, female 287.9
GTEX-14E7W-0011-R11a-SM-5ZZVA 70-79 years, male 286.0
GTEX-11TTK-0011-R11b-SM-DO112 60-69 years, female 284.8
GTEX-16NPV-0011-R11a-SM-7IGMK 50-59 years, female 284.2
GTEX-1B8L1-0011-R11b-SM-793DJ 60-69 years, male 283.9
GTEX-1N2DW-0011-R11b-SM-EXOIL 50-59 years, male 283.0
GTEX-13FXS-0011-R11a-SM-5L3DM 50-59 years, male 282.7
GTEX-13N2G-0011-R11a-SM-5MR3F 60-69 years, male 281.9
GTEX-12WSF-0011-R11a-SM-5LZVT 70-79 years, male 281.5
GTEX-1LVAO-0011-R11b-SM-EXOI8 60-69 years, male 280.4
GTEX-17F97-0011-R11b-SM-7KFRQ 50-59 years, male 279.5
GTEX-1IKOH-0011-R11a-SM-AHZ38 60-69 years, female 278.7
GTEX-13JVG-0011-R11a-SM-5KM53 60-69 years, male 277.7
GTEX-1ICLZ-0011-R11a-SM-CJI3N 60-69 years, male 276.4
GTEX-11OF3-0011-R11a-SM-57WCR 60-69 years, male 276.1
GTEX-1I1HK-0011-R11a-SM-B2LVN 60-69 years, male 276.1
GTEX-16XZZ-0011-R11a-SM-7EPI3 60-69 years, male 275.3
GTEX-1EMGI-0011-R11b-SM-9OSWX 60-69 years, male 275.1
GTEX-13RTJ-0011-R11a-SM-5O9CK 60-69 years, male 274.6
GTEX-XMD1-0011-R11A-SM-4AT5J 60-69 years, male 274.6
GTEX-ZUA1-0011-R11b-SM-51MTI 40-49 years, male 274.5
GTEX-1BAJH-0011-R11b-SM-7IGLM 70-79 years, male 271.8
GTEX-13OVL-0011-R11b-SM-5L3G7 50-59 years, male 271.7
GTEX-1HFI6-0011-R11b-SM-A96RU 40-49 years, male 271.0
GTEX-145LU-0011-R11b-SM-5P9JX 50-59 years, male 270.7
GTEX-1AX9I-0011-R11b-SM-7DHN4 60-69 years, male 269.4
GTEX-UTHO-0011-R11A-SM-3GIJE 60-69 years, male 269.2
GTEX-1JMOU-0011-R11b-SM-EXUTA 60-69 years, female 268.3
GTEX-S7SE-0011-R11A-SM-2XCDD 50-59 years, male 267.3
GTEX-1B8SF-0011-R11a-SM-79OOP 60-69 years, male 267.0
GTEX-1JMQJ-0011-R11a-SM-EXOJY 50-59 years, male 266.8
GTEX-13NYS-0011-R11b-SM-5MR4P 60-69 years, male 266.6
GTEX-13VXU-0011-R11b-SM-5O9DJ 50-59 years, male 266.2
GTEX-13OW6-0011-R11a-SM-5L3H2 50-59 years, male 265.5
GTEX-13SLX-0011-R11b-SM-5O9C8 50-59 years, female 265.4
GTEX-1HUB1-0011-R11b-SM-CE6SC 60-69 years, male 265.4
GTEX-15DYW-0011-R11a-SM-6LPIT 60-69 years, female 265.0
GTEX-14C5O-0011-R11b-SM-6872H 60-69 years, male 264.7
GTEX-1I1GS-0011-R11a-SM-C1YRU 60-69 years, male 264.2
GTEX-Y8DK-0011-R11A-SM-4SOK2 60-69 years, male 263.6
GTEX-1N2EE-0011-R11b-SM-EXOIJ 60-69 years, male 263.2
GTEX-1LSVX-0011-R11b-SM-EXOIA 60-69 years, male 261.7
GTEX-1J8EW-0011-R11a-SM-AHZ37 60-69 years, female 261.5
GTEX-11DXY-0011-R11a-SM-DNZZN 60-69 years, male 261.4
GTEX-15ER7-0011-R11a-SM-6LPIL 20-29 years, female 260.7
GTEX-12WSM-0011-R11a-SM-5DUX8 60-69 years, male 260.5
GTEX-17HG3-0011-R11b-SM-7KFT4 30-39 years, female 259.5
GTEX-OHPN-0011-R11A-SM-2I5FM 60-69 years, female 259.4
GTEX-11H98-0011-R11b-SM-5NQ6U 50-59 years, male 258.0
GTEX-1R9PO-0011-R11b-SM-EZ6NB 60-69 years, female 257.3
GTEX-1IKK5-0011-R11a-SM-C1YRX 60-69 years, male 256.8
GTEX-13NYB-0011-R11a-SM-5KM3Q 40-49 years, male 256.4
GTEX-1A3MX-0011-R11b-SM-7DUGP 60-69 years, male 256.3
GTEX-13CF2-0011-R11b-SM-5LZXO 60-69 years, male 255.9
GTEX-13FHP-0011-R11b-SM-5LZXP 50-59 years, male 255.9
GTEX-P44G-0011-R11A-SM-2I3FD 30-39 years, male 255.8
GTEX-1GTWX-0011-R11b-SM-C1YQJ 60-69 years, male 255.1
GTEX-RVPV-0011-R11A-SM-2TF6F 60-69 years, male 254.5
GTEX-NPJ7-0011-R11A-SM-2I3E8 60-69 years, female 253.9
GTEX-11GSP-0011-R11b-SM-5NQ7V 60-69 years, female 250.5
GTEX-WHSE-0011-R11A-SM-3P5YY 20-29 years, male 250.3
GTEX-1399T-0011-R11a-SM-5J2O1 60-69 years, male 248.9
GTEX-14BIN-0011-R11a-SM-5SI79 50-59 years, female 248.1
GTEX-WZTO-0011-R11A-SM-4E3K9 40-49 years, male 246.9
GTEX-12WSE-0011-R11b-SM-5P9JW 20-29 years, male 246.5
GTEX-WVLH-0011-R11A-SM-3MJFO 50-59 years, male 245.6
GTEX-1H3NZ-0011-R11b-SM-CE6SF 60-69 years, male 245.6
GTEX-13OW5-0011-R11b-SM-5L3GG 60-69 years, male 245.0
GTEX-18465-0011-R11a-SM-72D78 50-59 years, male 244.3
GTEX-1F48J-0011-R11b-SM-9OSWV 50-59 years, female 243.1
GTEX-1IL2U-0011-R11a-SM-CE6SO 60-69 years, male 243.1
GTEX-1J1OQ-0011-R11a-SM-A96S3 40-49 years, female 241.8
GTEX-ZAB4-0011-R11a-SM-4SOKI 40-49 years, male 240.3
GTEX-1H1ZS-0011-R11a-SM-C1YQM 70-79 years, male 240.0
GTEX-12ZZX-0011-R11a-SM-5DUVJ 40-49 years, female 239.1
GTEX-T5JC-0011-R11A-SM-32PMB 20-29 years, male 238.6
GTEX-X4XX-0011-R11A-SM-46MWQ 60-69 years, male 238.0
GTEX-1IL2V-0011-R11a-SM-ARU6T 70-79 years, male 237.6
GTEX-YFC4-0011-R11a-SM-4SOK6 40-49 years, female 230.8
GTEX-1GN73-0011-R11b-SM-9OSX4 60-69 years, male 230.5
GTEX-13FHO-0011-R11b-SM-5LZYQ 60-69 years, male 229.0
GTEX-Q2AG-0011-R11A-SM-2HMKZ 40-49 years, female 228.0
GTEX-13X6K-0011-R11a-SM-5P9F5 60-69 years, female 226.6
GTEX-14ABY-0011-R11a-SM-5SI7C 50-59 years, male 226.6
GTEX-13OW8-0011-R11a-SM-5L3GT 60-69 years, male 225.6
GTEX-131YS-0011-R11b-SM-5EGLM 60-69 years, female 224.3
GTEX-15DCD-0011-R11a-SM-D4P1R 70-79 years, female 217.9
GTEX-15EO6-0011-R11b-SM-6M47M 50-59 years, male 215.2
GTEX-R55E-0011-R11A-SM-2TC6I 20-29 years, male 212.2
GTEX-14DAQ-0011-R11a-SM-664NO 60-69 years, female 210.5
GTEX-T6MN-0011-R11A-SM-32QOX 50-59 years, male 210.4
GTEX-QMR6-0011-R11A-SM-32PKK 50-59 years, male 210.0
GTEX-13PVQ-0011-R11a-SM-5O9DU 50-59 years, male 209.0
GTEX-P44H-0011-R11A-SM-2XCER 40-49 years, male 207.5
GTEX-TSE9-0011-R11A-SM-3DB7N 60-69 years, female 205.7
GTEX-1H1DG-0011-R11a-SM-C1YQK 70-79 years, male 204.2
GTEX-1HB9E-0011-R11b-SM-ARU79 50-59 years, male 195.7
GTEX-14C39-0011-R11b-SM-5YYAF 40-49 years, male 195.0
GTEX-X4EP-0011-R11B-SM-4QASK 60-69 years, female 193.7
GTEX-X585-0011-R11B-SM-46MUZ 50-59 years, male 167.9
GTEX-QDT8-0011-R11A-SM-32PKD 30-39 years, female 152.0
GTEX-145MI-0011-R11a-SM-5P9JZ 60-69 years, female 132.2
GTEX-13OVJ-0011-R11a-SM-5P9H8 50-59 years, female 124.4
Show allShow less
Brain - Cerebellum
Average nTPM: 240.9
Samples: 241

Max nTPM: 447.7
Min nTPM: 123.8
Std nTPM: 37.2
Median nTPM: 240.2
GTEX-11OC5-0626-SM-5HL6M 60-69 years, male 447.7
GTEX-1C6WA-3326-SM-7MKGN 60-69 years, male 369.3
GTEX-1B996-2926-SM-7MXUH 60-69 years, male 349.8
GTEX-1IKOH-2826-SM-CNNRC 60-69 years, female 317.2
GTEX-1F75W-3126-SM-7P8SJ 60-69 years, male 315.7
GTEX-1GZHY-3026-SM-7MXVA 50-59 years, female 315.4
GTEX-131XH-2926-SM-5LZU4 50-59 years, male 307.5
GTEX-1MJK2-3026-SM-EV7A5 50-59 years, male 307.2
GTEX-11EI6-2926-SM-5985U 60-69 years, male 305.9
GTEX-14E6D-2926-SM-664OP 50-59 years, male 305.1
GTEX-16Z82-2926-SM-6LPJJ 60-69 years, male 303.9
GTEX-1RDX4-3226-SM-DPS14 50-59 years, female 299.3
GTEX-X261-3126-SM-4PQZC 50-59 years, male 295.9
GTEX-1H4P4-2726-SM-9JGGB 50-59 years, male 294.1
GTEX-ZF28-2926-SM-4WKG1 60-69 years, male 292.1
GTEX-1RNSC-3126-SM-EVR4V 60-69 years, male 290.4
GTEX-12ZZZ-3126-SM-5LZU6 60-69 years, male 289.5
GTEX-WL46-2826-SM-3LK81 50-59 years, male 288.4
GTEX-13112-2926-SM-5DUWT 50-59 years, male 287.6
GTEX-ZAJG-3026-SM-5HL92 50-59 years, female 285.7
GTEX-145LU-2626-SM-5LU9Z 50-59 years, male 285.5
GTEX-145MH-2926-SM-5Q5D2 50-59 years, male 284.7
GTEX-13S7M-3026-SM-5S2QQ 60-69 years, female 283.4
GTEX-1E1VI-2926-SM-7IGLT 50-59 years, male 282.9
GTEX-UTHO-2926-SM-3P5Z9 60-69 years, male 282.6
GTEX-1C6VR-3026-SM-7IGLW 60-69 years, male 282.2
GTEX-11O72-2826-SM-5HL6W 40-49 years, male 282.0
GTEX-Y111-2826-SM-4TT3O 50-59 years, male 281.7
GTEX-1KD4Q-3026-SM-EV7A7 40-49 years, male 279.8
GTEX-183WM-2726-SM-7KFRF 70-79 years, female 279.0
GTEX-1I1CD-2926-SM-A96SJ 60-69 years, female 277.9
GTEX-15G19-2826-SM-6M48K 60-69 years, male 276.3
GTEX-1399T-3126-SM-5IJFS 60-69 years, male 276.1
GTEX-1QEPI-3026-SM-EXOIW 60-69 years, female 276.1
GTEX-12WSE-2926-SM-5RQJ9 20-29 years, male 275.2
GTEX-1128S-2826-SM-5N9DI 60-69 years, female 273.8
GTEX-12WSC-2926-SM-5BC5Z 50-59 years, male 273.1
GTEX-12WSH-3126-SM-5LZW8 50-59 years, male 272.6
GTEX-11GSP-3126-SM-5A5LL 60-69 years, female 271.7
GTEX-ZYFD-2926-SM-5GID9 50-59 years, male 271.0
GTEX-13OW5-3126-SM-5MR3Y 60-69 years, male 270.7
GTEX-13SLX-3226-SM-5YYA6 50-59 years, female 269.7
GTEX-1313W-3026-SM-5LZUZ 50-59 years, female 269.6
GTEX-1A8G7-3026-SM-73KTT 60-69 years, male 269.6
GTEX-1H1CY-3026-SM-9OSW7 60-69 years, female 269.6
GTEX-1JMQJ-3126-SM-EV79G 50-59 years, male 269.4
GTEX-T2IS-2926-SM-32QPO 20-29 years, female 268.5
GTEX-1F48J-2726-SM-7P8PW 50-59 years, female 267.7
GTEX-13QIC-3026-SM-5LU58 60-69 years, female 267.6
GTEX-1F75A-2926-SM-7MXVN 50-59 years, male 267.3
GTEX-13OW7-2926-SM-5MR3Z 50-59 years, male 266.6
GTEX-14A5I-2826-SM-5SIBF 50-59 years, female 265.6
GTEX-ZDXO-2926-SM-4WKFM 60-69 years, male 265.4
GTEX-1EMGI-3126-SM-7MXUR 60-69 years, male 265.3
GTEX-16YQH-2926-SM-6LPJE 30-39 years, male 263.7
GTEX-13N2G-3126-SM-5IJGL 60-69 years, male 263.3
GTEX-1192X-3226-SM-5987D 50-59 years, male 262.9
GTEX-N7MS-2526-SM-2D7W3 60-69 years, male 262.8
GTEX-1LG7Y-3126-SM-EV7AS 50-59 years, male 262.4
GTEX-12WSD-3026-SM-5LZU7 60-69 years, female 261.7
GTEX-1R46S-3126-SM-DPRZ9 60-69 years, female 261.7
GTEX-11DZ1-2926-SM-5A5KI 50-59 years, male 261.6
GTEX-13FHP-2926-SM-5IJG9 50-59 years, male 261.3
GTEX-1PIIG-2826-SM-DTX7O 30-39 years, male 260.7
GTEX-13G51-3126-SM-5IJG7 60-69 years, male 260.4
GTEX-14JIY-2326-SM-6AJAJ 60-69 years, male 260.3
GTEX-Z93S-2826-SM-57WBL 50-59 years, male 259.8
GTEX-12126-0926-SM-5FQTW 20-29 years, male 259.2
GTEX-13O3Q-3026-SM-5IJGD 50-59 years, male 258.8
GTEX-1JMQK-2926-SM-D4P2T 60-69 years, male 258.4
GTEX-1NV8Z-3026-SM-DTX8Z 60-69 years, male 258.0
GTEX-11GSO-3026-SM-5Q5AL 60-69 years, male 257.6
GTEX-147F4-3026-SM-5Q5BJ 50-59 years, male 257.6
GTEX-13NYB-3226-SM-5J2ND 40-49 years, male 257.1
GTEX-ZAK1-2926-SM-5HL9S 50-59 years, female 256.9
GTEX-1F6I4-3026-SM-7P8SI 60-69 years, male 256.8
GTEX-15ER7-3026-SM-6M47W 20-29 years, female 255.9
GTEX-11NUK-3026-SM-5986K 50-59 years, male 254.5
GTEX-1RQEC-3026-SM-DPRXM 60-69 years, male 254.2
GTEX-14ASI-2926-SM-5Q5DG 60-69 years, male 254.0
GTEX-1EH9U-3126-SM-7MXU5 60-69 years, male 253.6
GTEX-11ZVC-3026-SM-59HJM 50-59 years, female 253.3
GTEX-1B8L1-3226-SM-7P8OX 60-69 years, male 252.1
GTEX-14JFF-2826-SM-6871Q 60-69 years, male 251.6
GTEX-13OVH-2926-SM-5IJFH 70-79 years, male 251.4
GTEX-1JN1M-3126-SM-AHZ4E 60-69 years, female 251.3
GTEX-1E2YA-2926-SM-7MGWX 50-59 years, male 251.0
GTEX-11EMC-3326-SM-5P9JH 60-69 years, female 250.8
GTEX-11ONC-3026-SM-5985W 60-69 years, male 250.5
GTEX-1JMLX-3026-SM-EV79Q 50-59 years, male 250.3
GTEX-17HG3-2826-SM-7EPGO 30-39 years, female 249.3
GTEX-13FXS-3026-SM-5LZYO 50-59 years, male 249.2
GTEX-T5JC-2326-SM-32PMR 20-29 years, male 249.0
GTEX-1HSMO-2926-SM-C1YR5 60-69 years, male 248.6
GTEX-131YS-3026-SM-5EGHY 60-69 years, female 248.3
GTEX-1H3O1-1826-SM-A96TO 60-69 years, male 248.1
GTEX-145MG-3126-SM-5Q5D3 50-59 years, male 247.5
GTEX-11ZTS-3226-SM-5EGID 60-69 years, female 247.0
GTEX-ZYY3-3026-SM-5GIEJ 60-69 years, female 246.9
GTEX-1B8SF-3026-SM-731DX 60-69 years, male 246.7
GTEX-12ZZY-2926-SM-5DUXO 60-69 years, male 246.5
GTEX-1B8SG-1926-SM-73KUB 50-59 years, male 246.4
GTEX-R55E-2526-SM-2TC6H 20-29 years, male 246.2
GTEX-1JJEA-2926-SM-C1YSK 60-69 years, male 246.2
GTEX-11ZUS-2826-SM-5EQKW 30-39 years, male 246.0
GTEX-13OVL-3026-SM-5IJF1 50-59 years, male 245.4
GTEX-YJ89-2926-SM-5P9IT 60-69 years, male 245.4
GTEX-1POEN-2726-SM-E9U6B 30-39 years, female 245.2
GTEX-T6MN-2526-SM-32PMN 50-59 years, male 244.3
GTEX-1HBPH-3026-SM-9WPNY 40-49 years, female 244.2
GTEX-14PJM-3026-SM-6LLHM 50-59 years, female 243.5
GTEX-1F6IF-3026-SM-7P8QN 60-69 years, male 243.0
GTEX-1I1GV-3026-SM-CNNR9 60-69 years, male 242.0
GTEX-13X6I-2926-SM-5Q5C3 60-69 years, male 241.8
GTEX-145MF-2826-SM-7EPGU 50-59 years, male 241.8
GTEX-111FC-3326-SM-5GZYV 60-69 years, male 241.7
GTEX-ZUA1-2926-SM-59HL3 40-49 years, male 241.5
GTEX-1IY9M-3126-SM-AHZ3A 60-69 years, male 240.6
GTEX-14E7W-2926-SM-5S2R8 70-79 years, male 240.5
GTEX-1F52S-3026-SM-7P8PV 60-69 years, female 240.3
GTEX-139TT-2626-SM-5LZUB 60-69 years, male 240.2
GTEX-17JCI-3026-SM-7EWDR 60-69 years, female 240.2
GTEX-ZVT3-2926-SM-5GU6M 60-69 years, female 240.1
GTEX-1R9PO-2826-SM-E6CPV 60-69 years, female 239.7
GTEX-PWO3-1026-SM-2I5F2 60-69 years, female 239.3
GTEX-1JJ6O-3026-SM-C1YQH 60-69 years, male 238.9
GTEX-14PN4-3026-SM-664O4 50-59 years, male 238.8
GTEX-QVJO-1325-SM-2S1QX 60-69 years, female 238.8
GTEX-N7MT-1226-SM-DKPOK 60-69 years, female 238.8
GTEX-145LS-3026-SM-5O99S 60-69 years, female 238.7
GTEX-1EX96-3126-SM-9JGGC 50-59 years, male 238.5
GTEX-13O3O-3026-SM-5KM42 60-69 years, female 238.4
GTEX-1LSVX-2826-SM-EVR58 60-69 years, male 238.3
GTEX-17EVP-2926-SM-793BU 40-49 years, male 238.0
GTEX-14DAQ-3026-SM-5S2QZ 60-69 years, female 237.7
GTEX-1C64N-3126-SM-79OO3 50-59 years, male 237.4
GTEX-13VXU-3026-SM-5LU3K 50-59 years, male 237.3
GTEX-1QP6S-3026-SM-EAZ4N 40-49 years, male 237.3
GTEX-14BIN-3326-SM-5Q5E6 50-59 years, female 236.7
GTEX-1CB4G-2926-SM-7MKFQ 60-69 years, male 236.0
GTEX-X4XX-2926-SM-3NMB1 60-69 years, male 235.9
GTEX-14BIM-3126-SM-5Q5C7 60-69 years, female 235.6
GTEX-17EVQ-2726-SM-7EWDT 70-79 years, male 235.6
GTEX-13RTJ-3126-SM-5S2Q4 60-69 years, male 234.8
GTEX-1B933-3026-SM-731DB 50-59 years, female 233.9
GTEX-1GTWX-2926-SM-7MXV4 60-69 years, male 233.9
GTEX-11NV4-2226-SM-5BC4T 60-69 years, male 233.1
GTEX-16XZZ-2926-SM-6LPK4 60-69 years, male 232.1
GTEX-11DXW-1026-SM-5H11K 40-49 years, male 231.7
GTEX-147GR-3126-SM-5S2PM 60-69 years, male 231.5
GTEX-15DYW-3026-SM-7KFRM 60-69 years, female 230.7
GTEX-17F97-2926-SM-7DUEQ 50-59 years, male 230.6
GTEX-WWYW-3026-SM-3NB36 50-59 years, female 230.5
GTEX-144GL-2926-SM-5O99F 50-59 years, male 229.7
GTEX-1HBPI-2726-SM-9WPPF 50-59 years, male 229.5
GTEX-15EO6-2926-SM-6M48D 50-59 years, male 229.4
GTEX-18465-2926-SM-7KFSE 50-59 years, male 229.3
GTEX-139TS-3126-SM-5LZWX 60-69 years, male 229.2
GTEX-17HII-2926-SM-79OMK 50-59 years, male 229.0
GTEX-WVLH-2926-SM-3MJG5 50-59 years, male 228.7
GTEX-11TTK-2826-SM-5GU5K 60-69 years, female 228.5
GTEX-1IDJH-3126-SM-C1YQS 70-79 years, male 228.2
GTEX-1GF9V-3026-SM-7P8R8 60-69 years, male 228.1
GTEX-1EU9M-2926-SM-793DF 60-69 years, male 227.4
GTEX-Y8DK-0726-SM-4TT3S 60-69 years, male 227.1
GTEX-1HSKV-2926-SM-B2LWJ 60-69 years, male 227.1
GTEX-XMD1-2826-SM-4AT5F 60-69 years, male 226.6
GTEX-ZZPT-2926-SM-5EQ5S 50-59 years, male 226.3
GTEX-1H1ZS-2926-SM-9WPP2 70-79 years, male 225.6
GTEX-1A3MX-2926-SM-718B7 60-69 years, male 224.9
GTEX-XLM4-2926-SM-4AT59 60-69 years, male 224.4
GTEX-1EWIQ-3026-SM-7IGOJ 70-79 years, female 223.7
GTEX-11DXY-3126-SM-5N9BT 60-69 years, male 223.1
GTEX-12WSM-2126-SM-5GCOC 60-69 years, male 222.7
GTEX-14ABY-3026-SM-664NE 50-59 years, male 221.9
GTEX-ZAB4-2926-SM-57WCV 40-49 years, male 221.5
GTEX-13CF2-3026-SM-5IFFX 60-69 years, male 221.2
GTEX-QVUS-2926-SM-3GIJB 60-69 years, female 221.2
GTEX-117XS-3126-SM-5GIDP 60-69 years, male 220.4
GTEX-P44G-2526-SM-2I5EK 30-39 years, male 218.8
GTEX-1GN73-3026-SM-7MXV8 60-69 years, male 218.8
GTEX-Q2AG-2826-SM-2HMJQ 40-49 years, female 218.2
GTEX-14BMV-2926-SM-5TDEE 50-59 years, male 217.9
GTEX-1I1HK-2726-SM-AHZ2M 60-69 years, male 217.8
GTEX-13JVG-3226-SM-5IJGJ 60-69 years, male 217.3
GTEX-1EKGG-3126-SM-9WPO5 60-69 years, male 217.1
GTEX-1KANB-3226-SM-D4P3G 50-59 years, male 216.7
GTEX-132Q8-2926-SM-5IFFP 60-69 years, male 216.6
GTEX-NPJ8-2626-SM-2D7W2 40-49 years, male 216.6
GTEX-18A6Q-2826-SM-7LTAO 60-69 years, male 216.4
GTEX-1IL2V-3026-SM-CYPSA 70-79 years, male 215.9
GTEX-RU72-2926-SM-2TF66 50-59 years, female 214.4
GTEX-14C5O-2926-SM-5RQI1 60-69 years, male 214.1
GTEX-1JMPZ-2826-SM-C1YRA 30-39 years, male 213.5
GTEX-1A8G6-3126-SM-731D8 60-69 years, male 213.3
GTEX-S7SE-2526-SM-2XCDL 50-59 years, male 209.8
GTEX-11PRG-2826-SM-5BC54 50-59 years, male 209.7
GTEX-1J1OQ-3126-SM-D4P2O 40-49 years, female 209.3
GTEX-1KWVE-2226-SM-CXZKN 30-39 years, male 209.1
GTEX-13OW6-2926-SM-5KM29 50-59 years, male 209.0
GTEX-1GZ2Q-3026-SM-9JGG3 40-49 years, male 208.8
GTEX-1P4AB-3026-SM-EXOJS 50-59 years, male 208.0
GTEX-17HHY-2926-SM-79OJW 50-59 years, male 207.2
GTEX-14JG1-2926-SM-686ZK 40-49 years, male 206.8
GTEX-1GF9W-2726-SM-9JGGW 60-69 years, male 206.4
GTEX-13X6K-2826-SM-5O9DS 60-69 years, female 206.0
GTEX-14C39-3026-SM-5S2QE 40-49 years, male 203.5
GTEX-11DYG-2926-SM-5H132 60-69 years, male 202.7
GTEX-1JMOU-2826-SM-EV79R 60-69 years, female 202.7
GTEX-13OW8-2926-SM-5L3FV 60-69 years, male 202.5
GTEX-1GZ4I-2926-SM-9JGGO 50-59 years, male 201.3
GTEX-WZTO-2826-SM-3NM8P 40-49 years, male 200.9
GTEX-1269C-3126-SM-5EGI6 60-69 years, female 200.0
GTEX-12ZZX-2826-SM-5BC6K 40-49 years, female 199.1
GTEX-13PVQ-2926-SM-5L3HJ 50-59 years, male 197.9
GTEX-1HCVE-2926-SM-9WPPJ 50-59 years, male 197.3
GTEX-OHPN-2626-SM-2I5H1 60-69 years, female 196.9
GTEX-1CB4H-3026-SM-79OLX 60-69 years, female 196.4
GTEX-RNOR-2226-SM-2TF5O 50-59 years, female 193.6
GTEX-15SHU-3026-SM-6LPIB 40-49 years, female 190.0
GTEX-WHSE-2926-SM-3NMBG 20-29 years, male 188.0
GTEX-13X6J-2926-SM-7EPGP 50-59 years, male 186.3
GTEX-1H1DG-2826-SM-9JGHB 70-79 years, male 186.1
GTEX-NPJ7-2826-SM-2I3FU 60-69 years, female 185.1
GTEX-1PWST-3026-SM-EAZ3H 70-79 years, male 185.1
GTEX-13JUV-3026-SM-5K7WX 40-49 years, female 183.1
GTEX-13FHO-2926-SM-5L3ES 60-69 years, male 182.0
GTEX-1H3NZ-2926-SM-9WPQ8 60-69 years, male 181.5
GTEX-1HB9E-3126-SM-AHZ4M 50-59 years, male 179.3
GTEX-1BAJH-3126-SM-7MGXY 70-79 years, male 176.8
GTEX-14PJO-2926-SM-686ZI 60-69 years, male 174.9
GTEX-QDT8-3026-SM-32PKB 30-39 years, female 172.4
GTEX-1JJE9-3026-SM-CNNPA 70-79 years, male 172.0
GTEX-PVOW-2626-SM-32PL8 40-49 years, male 170.4
GTEX-QMR6-1326-SM-32PLB 50-59 years, male 170.3
GTEX-X4EP-3026-SM-3P5YP 60-69 years, female 168.5
GTEX-TSE9-2926-SM-3DB77 60-69 years, female 168.0
GTEX-YFC4-3026-SM-5IFJK 40-49 years, female 167.6
GTEX-P44H-2426-SM-2XCEJ 40-49 years, male 164.3
GTEX-1H3VE-2826-SM-9WPOL 40-49 years, male 163.2
GTEX-13OVJ-2726-SM-5IJG6 50-59 years, female 123.8
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CEREBELLUM - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 188.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Cerebellum
Scaled Tags Per Million: 188.9
FF:10083-102B2 22-68 years, mixed 240.4
FF:10166-103B4 76 years, female 137.4

CEREBELLUM - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 209.3
Pig sample Sample description nTPM
Cerebellum
nTPM: 209.3
Samples: 4

Max nTPM: 317.9
Min nTPM: 151.3
Sample A Female 317.9
Sample B Female 181.0
Sample C Male 151.3
Sample D Male 187.0

CEREBELLUM - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 675.5
Mouse sample Sample description nTPM
Cerebellum
nTPM: 675.5
Samples: 4

Max nTPM: 686.3
Min nTPM: 655.3
Sample A Male 678.3
Sample B Male 655.3
Sample C Female 686.3
Sample D Female 682.0

CEREBELLUM - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

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Max Expression energy 4.7
Allen experiment id Experiment description Expression energy
Cerebellum
Expression energy: 4.7
71280733 Antisense, RP_050818_01_E04, Mouse strain C57BL/6J (56 days, male) 4.9
75988633 Antisense, RP_060620_02_E05, Mouse strain C57BL/6J (56 days, male) 4.5

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