AMYGDALA - Expression summary
Mouse brain, Intensity
Amygdalai 		73.473
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:53.4 nTPM
HPA:53.4 nTPM
GTEx:58.5 nTPM
FANTOM5:44.5 Scaled Tags Per Million
Pig:16.5 nTPM
Mouse:47.3 nTPM
Allen mouse:1.7 Expression energy

AMYGDALA - Mouse brain profilei , antibody HPA036900
Amygdala mean intensity 73.473
intensityi
FRONT BACK
Nucleus of the lateral olfactory tract 37.943
Basal medial amygdaloid nucleus 73.473
Basal lateral amygdala* -
Basal lateral amygdaloid nucleus 37.182
Cortical amygdala 72.032
Central amygdala 47.895
Medial amygdaloid nucleus 73.029

AMYGDALA - HPA Brain RNA-seq
Max nTPM 53.4
Sample id Sample description nTPM
Amygdala
nTPM: 52.2
2695 Female, age 67, right hemisphere 54.3
2514 Male, age 75, right hemisphere 53.5
1987 Female, age 91, left hemisphere 52.2
2517 Female, age 94, left hemisphere 51.3
2814 Male, age 76, right hemisphere 49.7
Basal amygdala
nTPM: 51.1
2609 Male, age 75, right hemisphere 66.4
2243 Female, age 91, right hemisphere 55.5
2110 Male, age 80, left hemisphere 50.8
1955 Male, age 76, both hemispheres 49.5
2685 Female, age 94, left hemisphere 46.4
2827 Female, age 67, right hemisphere 38.0
Central amygdala
nTPM: 53.4
2515 Male, age 75, right hemisphere 58.1
2239 Male, age 80, left hemisphere 55.2
1905 Male, age 76, both hemispheres 53.7
2701 Female, age 91, right hemisphere 53.0
2826 Female, age 94, left hemisphere 46.9
Corticomedial amygdala
nTPM: 51.2
2428 Male, age 75, right hemisphere 60.7
2829 Male, age 80, left hemisphere 55.4
2242 Female, age 91, right hemisphere 54.0
2429 Female, age 94, left hemisphere 49.4
2240 Male, age 76, both hemispheres 48.0
2535 Female, age 67, right hemisphere 39.5
Lateral amygdala
nTPM: 51.0
2516 Male, age 75, right hemisphere 62.9
2256 Male, age 80, left hemisphere 56.3
2255 Female, age 91, right hemisphere 56.2
1883 Male, age 76, both hemispheres 48.5
2534 Female, age 94, left hemisphere 45.3
2830 Female, age 67, right hemisphere 36.5
Stria terminalis, bed nucleus
nTPM: 41.8
2201 Male, age 74, unknown 44.5
1974 Female, age 91, both hemispheres 40.7
2486 Female, age 94, both hemispheres 40.1

AMYGDALA - GTEx RNA-seqi
Average nTPM 58.5
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 58.5
Samples: 152

Max nTPM: 176.8
Min nTPM: 5.0
Std nTPM: 31.4
Median nTPM: 51.5
GTEX-13NYS-0011-R4b-SM-5MR3O 60-69 years, male 176.8
GTEX-13OVJ-0011-R4b-SM-5P9H5 50-59 years, female 154.1
GTEX-1H1ZS-0011-R4b-SM-CKZO7 70-79 years, male 154.1
GTEX-13FLV-0011-R4a-SM-5LZYU 50-59 years, male 140.1
GTEX-1J1OQ-0011-R4a-SM-D4P2A 40-49 years, female 136.4
GTEX-1HB9E-0011-R4b-SM-ARZLS 50-59 years, male 126.7
GTEX-12ZZW-0011-R4a-SM-5DUX9 50-59 years, male 120.0
GTEX-13RTJ-0011-R4b-SM-5PNX1 60-69 years, male 114.3
GTEX-13OW5-0011-R4b-SM-5L3HS 60-69 years, male 111.2
GTEX-1J8Q2-0011-R4a-SM-ADEHA 60-69 years, male 111.2
GTEX-1GTWX-0011-R4a-SM-C1YQI 60-69 years, male 110.4
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 44.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 44.5
FF:10151-102I7 76 years, female 44.5

AMYGDALA - Pig RNA-seqi
Average nTPM 16.5
Pig sample Sample description nTPM
Amygdala
nTPM: 16.5
Samples: 4

Max nTPM: 18.0
Min nTPM: 13.7
Sample A Female 17.0
Sample B Female 17.1
Sample C Male 18.0
Sample D Male 13.7

AMYGDALA - Mouse RNA-seqi
Average nTPM 47.3
Mouse sample Sample description nTPM
Amygdala
nTPM: 47.4
Samples: 4

Max nTPM: 59.3
Min nTPM: 39.1
Sample A Male 39.1
Sample B Male 42.3
Sample C Female 59.3
Sample D Female 48.7

AMYGDALA - Allen Mouse ISHi
Max Expression energy 1.7
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 1.7
1725 Antisense, RP_040604_01_B01, Mouse strain C57BL/6J (56 days, male) 1.7
1724 Antisense, RP_040604_01_B01, Mouse strain C57BL/6J (56 days, male) 1.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.