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ALDH1L1
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  • ALDH1L1
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Medium
Neuronal cells: Low
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:64.9 nTPM
FANTOM5:49.6 Scaled Tags Per Million
Pig:11.2 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA036900Antibody HPA050139
Glial cells HighMedium
Neuronal cells MediumNot detected




CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 64.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 64.9
Samples: 246

Max nTPM: 199.2
Min nTPM: 10.0
Std nTPM: 32.4
Median nTPM: 57.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 199.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 196.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 167.1
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 165.5
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 163.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 162.0
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 157.1
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 144.0
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 136.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 132.5
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 130.8
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 130.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 127.3
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 125.3
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 124.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 122.4
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 114.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 112.0
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 111.4
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 111.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 111.1
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 109.0
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 108.3
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 106.0
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 105.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 105.4
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 105.2
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 104.7
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 103.3
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 101.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 99.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 98.6
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 98.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 98.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 96.7
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 94.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 91.9
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 91.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 90.8
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 90.0
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 89.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 89.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 89.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 88.7
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 88.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 87.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 87.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 87.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 87.2
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 87.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 86.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 86.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 86.6
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 86.5
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 86.4
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 86.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 85.1
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 83.9
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 82.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 81.9
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 81.9
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 81.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 80.5
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 80.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 80.4
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 80.3
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 77.4
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 77.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 76.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 75.9
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 75.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 75.9
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 75.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 75.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 75.4
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 75.2
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 74.6
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 74.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 74.5
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 74.4
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 74.2
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 74.2
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 73.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 73.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 72.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 71.8
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 70.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 70.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 68.9
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 68.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 68.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 68.4
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 68.4
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 68.1
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 68.1
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 68.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 67.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 67.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 67.0
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 66.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 66.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 65.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 65.6
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 65.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 65.1
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 65.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 64.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 64.6
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 63.7
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 62.5
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 62.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 62.2
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 62.0
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 61.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 60.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 60.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 59.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 59.8
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 59.7
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 59.1
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 58.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 58.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 57.6
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 57.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 56.9
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 56.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 56.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 56.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 56.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 56.2
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 56.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 55.8
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 55.8
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 55.2
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 54.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 54.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 53.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 53.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 53.7
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 53.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 53.2
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 53.1
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 53.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 52.9
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 52.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 52.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 52.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 51.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 50.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 50.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 50.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 50.0
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 49.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 49.6
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 49.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 49.4
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 49.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 48.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 48.6
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 48.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 47.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 47.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 47.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 47.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 47.4
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 47.3
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 46.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 46.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 46.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 46.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 46.3
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 46.2
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 46.1
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 46.0
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 45.4
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 45.4
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 45.3
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 45.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 45.0
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 44.7
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 43.7
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 43.6
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 43.3
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 43.2
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 43.1
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 42.8
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 42.7
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 42.7
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 42.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 42.1
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 41.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 40.3
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 40.3
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 40.3
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 40.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 39.9
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 39.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 39.7
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 39.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 39.5
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 39.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 39.1
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 37.6
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 37.5
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 37.4
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 37.3
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 37.0
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 36.4
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 36.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 35.8
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 35.7
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 35.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 35.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 34.9
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 34.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 34.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 33.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 33.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 32.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 32.6
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 31.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 31.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 31.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 31.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 30.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 30.7
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 30.3
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 29.5
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 28.8
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 28.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 27.4
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 26.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 26.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 24.3
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 22.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 21.0
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 18.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 16.5
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 16.3
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 15.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 14.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 13.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 13.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 11.2
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 10.2
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 10.0
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 49.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 49.6
FF:10164-103B2 76 years, female 49.6

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 11.2
Pig sample Sample description nTPM
Caudate
nTPM: 11.3
Samples: 4

Max nTPM: 14.4
Min nTPM: 7.9
Sample A Female 9.0
Sample B Female 14.4
Sample C Male 13.7
Sample D Male 7.9

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