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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Low
Neuronal cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:252.1 nTPM
FANTOM5:325.6 Scaled Tags Per Million
Pig:95.1 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA056420Antibody CAB013007
Glial cells LowMedium
Neuronal cells HighHigh





CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 252.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 252.1
Samples: 246

Max nTPM: 474.0
Min nTPM: 183.4
Std nTPM: 45.1
Median nTPM: 242.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 474.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 416.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 410.9
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 408.0
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 404.0
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 402.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 386.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 361.5
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 352.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 343.9
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 339.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 338.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 329.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 329.2
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 327.4
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 324.1
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 321.8
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 320.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 319.1
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 318.6
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 317.4
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 309.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 309.0
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 306.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 305.3
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 305.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 304.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 302.0
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 301.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 300.1
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 299.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 297.5
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 296.7
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 296.1
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 295.5
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 293.9
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 290.9
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 288.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 288.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 287.9
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 285.1
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 284.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 284.3
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 284.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 283.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 283.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 283.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 280.7
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 279.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 279.8
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 279.2
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 278.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 277.2
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 277.0
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 275.3
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 275.2
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 274.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 274.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 273.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 273.6
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 271.6
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 271.5
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 269.5
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 269.0
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 268.9
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 268.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 267.7
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 266.9
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 266.8
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 266.6
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 266.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 265.4
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 264.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 264.1
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 263.9
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 262.5
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 262.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 262.3
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 262.3
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 261.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 261.4
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 261.2
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 261.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 260.8
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 260.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 259.8
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 259.4
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 258.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 258.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 257.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 257.3
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 257.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 256.6
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 256.0
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 255.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 255.8
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 255.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 254.9
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 254.5
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 254.0
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 253.6
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 253.5
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 252.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 252.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 251.5
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 250.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 250.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 250.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 250.0
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 249.1
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 247.8
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 247.6
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 247.6
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 247.4
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 245.6
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 245.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 245.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 245.0
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 244.9
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 244.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 243.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 243.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 242.9
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 242.7
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 242.5
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 242.4
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 241.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 240.3
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 239.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 239.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 239.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 239.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 239.3
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 239.2
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 239.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 238.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 237.7
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 237.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 237.1
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 236.8
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 236.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 236.4
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 235.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 235.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 235.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 234.9
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 234.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 234.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 233.9
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 233.9
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 233.5
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 232.7
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 232.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 232.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 232.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 231.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 231.4
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 231.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 230.7
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 230.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 229.8
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 229.8
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 229.8
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 228.8
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 228.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 228.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 228.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 227.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 227.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 227.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 225.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 225.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 224.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 224.4
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 224.4
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 224.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 223.7
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 223.6
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 223.5
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 222.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 222.7
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 221.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 221.3
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 221.0
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 220.5
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 219.9
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 219.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 219.2
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 219.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 218.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 218.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 218.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 218.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 218.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 217.8
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 217.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 217.4
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 217.1
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 217.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 216.2
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 215.9
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 215.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 213.6
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 213.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 213.2
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 212.8
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 212.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 212.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 212.2
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 212.0
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 211.4
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 211.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 210.8
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 210.7
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 210.7
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 209.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 209.6
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 209.1
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 208.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 207.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 204.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 204.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 204.2
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 203.9
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 203.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 203.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 202.4
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 200.9
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 200.5
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 199.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 199.2
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 198.6
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 198.5
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 198.3
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 197.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 197.3
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 194.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 194.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 194.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 193.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 193.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 192.3
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 188.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 188.4
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 184.4
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 183.4
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 325.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 325.6
FF:10164-103B2 76 years, female 325.6

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 95.1
Pig sample Sample description nTPM
Caudate
nTPM: 95.1
Samples: 4

Max nTPM: 103.5
Min nTPM: 84.2
Sample A Female 103.5
Sample B Female 94.1
Sample C Male 98.6
Sample D Male 84.2

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