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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:131.9 nTPM
FANTOM5:86.8 Scaled Tags Per Million
Pig:38.8 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA044171Antibody HPA050400
Glial cells LowNot detected
Neuronal cells MediumMedium





CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 131.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 131.9
Samples: 246

Max nTPM: 301.2
Min nTPM: 70.1
Std nTPM: 34.9
Median nTPM: 125.8
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 301.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 258.6
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 245.2
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 232.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 229.5
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 229.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 224.3
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 214.7
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 211.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 211.1
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 209.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 207.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 206.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 198.2
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 196.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 193.3
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 190.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 189.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 189.4
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 188.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 186.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 186.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 184.5
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 183.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 180.3
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 178.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 175.7
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 172.0
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 170.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 170.1
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 168.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 165.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 165.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 165.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 165.3
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 163.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 162.9
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 161.9
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 161.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 160.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 156.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 155.1
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 155.1
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 154.5
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 152.8
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 152.7
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 151.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 151.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 151.6
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 151.3
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 150.5
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 149.9
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 149.7
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 149.2
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 147.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 147.5
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 146.7
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 146.7
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 146.6
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 146.1
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 145.6
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 144.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 144.4
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 143.2
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 143.1
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 142.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 142.7
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 142.3
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 142.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 141.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 141.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 140.8
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 140.7
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 140.6
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 139.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 139.2
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 139.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 138.8
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 138.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 138.5
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 138.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 138.2
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 138.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 137.9
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 137.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 137.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 137.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 137.4
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 137.4
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 135.9
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 135.7
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 135.4
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 135.0
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 134.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 134.5
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 134.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 134.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 134.1
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 134.0
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 133.6
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 133.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 132.9
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 132.5
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 132.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 132.1
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 132.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 131.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 131.7
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 131.4
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 131.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 130.5
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 130.2
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 130.1
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 129.7
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 129.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 128.5
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 128.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 128.1
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 127.5
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 127.3
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 126.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 126.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 125.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 125.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 125.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 125.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 125.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 125.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 125.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 124.7
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 124.5
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 123.7
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 123.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 123.3
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 123.1
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 122.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 122.5
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 122.3
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 122.2
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 122.0
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 121.9
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 121.8
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 121.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 121.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 121.3
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 121.3
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 121.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 121.2
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 121.0
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 119.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 119.5
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 119.1
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 117.6
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 117.5
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 117.1
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 117.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 117.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 116.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 116.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 115.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 115.6
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 115.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 115.2
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 114.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 114.7
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 114.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 113.8
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 113.6
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 113.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 112.9
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 112.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 112.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 112.1
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 112.0
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 111.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 111.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 110.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 110.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 110.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 110.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 110.1
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 110.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 109.9
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 109.8
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 109.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 109.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 109.2
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 109.0
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 108.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 108.4
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 107.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 107.8
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 107.3
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 107.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 106.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 105.9
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 105.2
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 104.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 104.2
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 103.5
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 103.3
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 103.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 103.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 102.5
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 102.2
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 102.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 102.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 101.4
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 100.8
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 100.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 100.5
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 99.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 98.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 97.4
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 96.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 96.5
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 96.0
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 95.8
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 95.3
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 95.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 94.2
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 93.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 93.0
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 92.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 91.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 91.2
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 90.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 90.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 89.2
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 88.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 88.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 87.5
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 87.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 86.8
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 86.5
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 84.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 84.4
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 83.8
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 83.3
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 83.1
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 82.1
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 81.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 80.2
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 76.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 76.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 70.1
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 86.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 86.8
FF:10164-103B2 76 years, female 86.8

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 38.8
Pig sample Sample description nTPM
Caudate
nTPM: 38.8
Samples: 4

Max nTPM: 47.4
Min nTPM: 33.9
Sample A Female 36.5
Sample B Female 37.3
Sample C Male 47.4
Sample D Male 33.9

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