HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:58.7 nTPM
HPA:58.7 nTPM
GTEx:38.2 nTPM
FANTOM5:68.2 Scaled Tags Per Million
Pig:17.3 nTPM
Mouse:21.3 nTPM
Allen mouse:0.6 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 58.7
Sample id Sample description nTPM
Hippocampus
nTPM: 58.7
2148 Female, age 91, left hemisphere 75.9
1911 Female, age 85, right hemisphere 60.5
2529 Female, age 94, left hemisphere 58.7
1898 Male, age 80, left hemisphere 57.6
1855 Male, age 76, left hemisphere 52.1
2621 Female, age 67, right hemisphere 47.2
Dentate gyrus
nTPM: 57.2
2528 Male, age 74, both hemispheres 80.6
2246 Female, age 85, both hemispheres 63.9
1927 Female, age 91, both hemispheres 62.2
2530 Female, age 94, left hemisphere 50.1
2531 Female, age 67, both hemispheres 46.2
2010 Male, age 76, both hemispheres 40.2
Entorhinal gyrus
nTPM: 56.3
2117 Female, age 91, right hemisphere 69.7
2686 Male, age 75, right hemisphere 59.3
1787 Male, age 76, left hemisphere 55.7
1938 Female, age 85, left hemisphere 53.8
2764 Male, age 80, right hemisphere 51.8
2613 Female, age 94, left hemisphere 47.6
Hippocampus, CA1
nTPM: 50.0
2527 Male, age 74, both hemispheres 65.7
1873 Female, age 85, both hemispheres 57.4
2082 Female, age 91, right hemisphere 50.9
2749 Male, age 80, left hemisphere 39.0
2045 Male, age 76, both hemispheres 37.2
Hippocampus, CA2
nTPM: 56.1
1940 Female, age 85, left hemisphere 75.3
1963 Male, age 80, left hemisphere 63.5
2437 Female, age 94, left hemisphere 54.6
2249 Male, age 74, both hemispheres 52.4
2113 Female, age 91, right hemisphere 50.9
1892 Male, age 76, both hemispheres 40.2
Hippocampus, CA3
nTPM: 53.9
2861 Female, age 67, both hemispheres 67.7
2620 Female, age 94, left hemisphere 64.5
1891 Female, age 85, both hemispheres 57.6
2436 Male, age 74, both hemispheres 48.5
2137 Male, age 80, left hemisphere 43.9
1867 Male, age 76, both hemispheres 41.3
Parahippocampal cortex
nTPM: 51.8
2692 Male, age 74, both hemispheres 69.3
1933 Female, age 85, both hemispheres 58.0
2622 Female, age 67, right hemisphere 56.7
1850 Male, age 80, both hemispheres 50.4
2250 Female, age 67, right hemisphere 48.7
1990 Female, age 91, right hemisphere 48.4
2693 Female, age 94, both hemispheres 48.4
2018 Male, age 76, both hemispheres 47.0
2245 Female, age 91, both hemispheres 45.9
2532 Female, age 72, left hemisphere 45.5
Perirhinal gyrus
nTPM: 46.0
1794 Male, age 80, right hemisphere 51.4
2521 Female, age 94, right hemisphere 47.2
1847 Female, age 91, left hemisphere 44.6
1841 Female, age 85, right hemisphere 44.2
2848 Male, age 76, right hemisphere 42.7
Subiculum
nTPM: 56.0
2729 Female, age 91, right hemisphere 77.7
2619 Male, age 74, both hemispheres 67.4
2438 Female, age 94, left hemisphere 51.1
1901 Male, age 80, both hemispheres 49.1
1977 Female, age 85, both hemispheres 47.4
2042 Male, age 76, both hemispheres 43.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 38.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 38.2
Samples: 197

Max nTPM: 90.8
Min nTPM: 6.9
Std nTPM: 15.6
Median nTPM: 35.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 90.8
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 85.9
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 82.7
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 81.0
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 80.7
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 77.5
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 73.6
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 71.6
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 68.9
GTEX-ZDXO-0011-R1a-SM-4WKF4 60-69 years, male 66.7
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 65.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 68.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 68.2
FF:10153-102I9 76 years, female 83.1
FF:10169-103B7 60 years, female 53.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 17.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 12.7
Samples: 4

Max nTPM: 13.9
Min nTPM: 11.6
Sample A Female 13.9
Sample B Female 11.6
Sample C Male 13.4
Sample D Male 12.0
Entorhinal cortex
nTPM: 17.3
Samples: 4

Max nTPM: 18.8
Min nTPM: 14.7
Sample A Female 18.8
Sample B Female 18.6
Sample C Male 16.9
Sample D Male 14.7
Subiculum
nTPM: 13.6
Samples: 4

Max nTPM: 16.9
Min nTPM: 12.3
Sample A Female 16.9
Sample B Female 12.3
Sample C Male 12.9
Sample D Male 12.3
Ventral hippocampus
nTPM: 13.6
Samples: 4

Max nTPM: 16.0
Min nTPM: 11.4
Sample A Female 13.0
Sample B Female 11.4
Sample C Male 16.0
Sample D Male 13.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 21.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 21.3
Samples: 4

Max nTPM: 21.8
Min nTPM: 20.7
Sample A Male 21.6
Sample B Male 21.2
Sample C Female 21.8
Sample D Female 20.7
Hippocampal formation
nTPM: 20.6
Samples: 4

Max nTPM: 22.6
Min nTPM: 17.5
Sample A Male 21.8
Sample B Male 20.5
Sample C Female 17.5
Sample D Female 22.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.6
73712870 Antisense, RP_051206_02_E11, Mouse strain C57BL/6J (56 days, male) 0.6

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