HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:70.6 nTPM
HPA:70.6 nTPM
GTEx:67.2 nTPM
FANTOM5:178.1 Scaled Tags Per Million
Pig:9.7 nTPM
Mouse:154.7 nTPM
Allen mouse:6.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA036518
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 70.6
Sample id Sample description nTPM
Hippocampus
nTPM: 66.6
2621 Female, age 67, right hemisphere 70.8
1898 Male, age 80, left hemisphere 69.7
2148 Female, age 91, left hemisphere 67.0
1855 Male, age 76, left hemisphere 66.0
2529 Female, age 94, left hemisphere 65.1
1911 Female, age 85, right hemisphere 60.8
Dentate gyrus
nTPM: 65.9
2246 Female, age 85, both hemispheres 69.4
2010 Male, age 76, both hemispheres 68.5
1927 Female, age 91, both hemispheres 68.1
2530 Female, age 94, left hemisphere 65.9
2531 Female, age 67, both hemispheres 63.2
2528 Male, age 74, both hemispheres 60.2
Entorhinal gyrus
nTPM: 64.6
1938 Female, age 85, left hemisphere 67.2
1787 Male, age 76, left hemisphere 66.8
2764 Male, age 80, right hemisphere 65.7
2613 Female, age 94, left hemisphere 65.2
2686 Male, age 75, right hemisphere 62.9
2117 Female, age 91, right hemisphere 59.6
Hippocampus, CA1
nTPM: 68.7
2749 Male, age 80, left hemisphere 81.4
2045 Male, age 76, both hemispheres 68.4
1873 Female, age 85, both hemispheres 66.9
2527 Male, age 74, both hemispheres 65.7
2082 Female, age 91, right hemisphere 61.0
Hippocampus, CA2
nTPM: 67.0
1892 Male, age 76, both hemispheres 74.5
1963 Male, age 80, left hemisphere 69.9
2249 Male, age 74, both hemispheres 66.2
1940 Female, age 85, left hemisphere 65.4
2113 Female, age 91, right hemisphere 63.3
2437 Female, age 94, left hemisphere 62.6
Hippocampus, CA3
nTPM: 66.3
2137 Male, age 80, left hemisphere 77.3
1867 Male, age 76, both hemispheres 67.3
2620 Female, age 94, left hemisphere 65.5
1891 Female, age 85, both hemispheres 63.3
2436 Male, age 74, both hemispheres 62.8
2861 Female, age 67, both hemispheres 61.4
Parahippocampal cortex
nTPM: 66.5
2245 Female, age 91, both hemispheres 73.1
1850 Male, age 80, both hemispheres 71.8
2532 Female, age 72, left hemisphere 69.0
2250 Female, age 67, right hemisphere 66.3
1933 Female, age 85, both hemispheres 65.7
2018 Male, age 76, both hemispheres 65.7
2693 Female, age 94, both hemispheres 65.0
2622 Female, age 67, right hemisphere 64.2
1990 Female, age 91, right hemisphere 62.9
2692 Male, age 74, both hemispheres 61.0
Perirhinal gyrus
nTPM: 70.6
1794 Male, age 80, right hemisphere 73.4
2848 Male, age 76, right hemisphere 71.3
2521 Female, age 94, right hemisphere 70.7
1841 Female, age 85, right hemisphere 68.9
1847 Female, age 91, left hemisphere 68.7
Subiculum
nTPM: 63.4
1977 Female, age 85, both hemispheres 65.5
1901 Male, age 80, both hemispheres 64.5
2619 Male, age 74, both hemispheres 64.3
2042 Male, age 76, both hemispheres 63.7
2438 Female, age 94, left hemisphere 62.2
2729 Female, age 91, right hemisphere 60.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 67.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 67.2
Samples: 197

Max nTPM: 120.9
Min nTPM: 36.3
Std nTPM: 17.8
Median nTPM: 61.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 120.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 119.3
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 118.3
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 116.4
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 115.9
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 115.5
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 113.2
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 111.4
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 110.9
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 106.3
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 103.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 178.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 178.1
FF:10169-103B7 60 years, female 281.4
FF:10153-102I9 76 years, female 74.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 9.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 9.4
Samples: 4

Max nTPM: 12.1
Min nTPM: 7.9
Sample A Female 8.0
Sample B Female 9.7
Sample C Male 7.9
Sample D Male 12.1
Entorhinal cortex
nTPM: 9.7
Samples: 4

Max nTPM: 10.9
Min nTPM: 8.9
Sample A Female 9.1
Sample B Female 8.9
Sample C Male 9.7
Sample D Male 10.9
Subiculum
nTPM: 8.4
Samples: 4

Max nTPM: 9.6
Min nTPM: 6.3
Sample A Female 6.3
Sample B Female 8.9
Sample C Male 8.7
Sample D Male 9.6
Ventral hippocampus
nTPM: 9.7
Samples: 4

Max nTPM: 10.5
Min nTPM: 7.7
Sample A Female 10.3
Sample B Female 10.5
Sample C Male 7.7
Sample D Male 10.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 154.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 147.3
Samples: 4

Max nTPM: 152.0
Min nTPM: 143.8
Sample A Male 143.8
Sample B Male 148.1
Sample C Female 145.3
Sample D Female 152.0
Hippocampal formation
nTPM: 154.7
Samples: 4

Max nTPM: 171.0
Min nTPM: 134.0
Sample A Male 160.0
Sample B Male 153.7
Sample C Female 171.0
Sample D Female 134.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.8
69080733 Antisense, RP_050324_02_D02, Mouse strain C57BL/6J (56 days, male) 6.8

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