COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: High
Glandular cells: High
Peripheral nerve/ganglion: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:38.6 nTPM
HPA:15.4 nTPM
GTEx:38.6 nTPM
FANTOM5:13.3 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA035848
Endothelial cells High
Glandular cells High
Peripheral nerve/ganglion High



COLON - HPA RNA-seqi
Average nTPM 15.4
overview
Male, age 54 		Colon sample 67
nTPM: 10.8
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 14.6
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 16.3
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 9.8
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 15.6
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 16.1
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 13.8
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 14.1
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 18.1
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 10.6
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 16.8
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 12.3
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 30.7
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 38.6
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 38.6
Samples: 373

Max nTPM: 167.5
Min nTPM: 15.3
Std nTPM: 13.8
Median nTPM: 36.8
GTEX-13PL7-2426-SM-5J2N3 60-69 years, female 167.5
GTEX-1LKK1-2426-SM-DIPES 50-59 years, female 91.3
GTEX-14C5O-2626-SM-5RQI5 60-69 years, male 86.7
GTEX-1JN6P-2126-SM-ARL98 60-69 years, male 85.2
GTEX-1P4AB-2626-SM-DTXEU 50-59 years, male 79.4
GTEX-13OW8-2726-SM-5L3FZ 60-69 years, male 75.8
GTEX-1LVAO-2826-SM-E9TJH 60-69 years, male 72.0
GTEX-1HCU6-2926-SM-B2LWV 60-69 years, female 70.1
GTEX-V955-1726-SM-4JBHF 60-69 years, male 70.0
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 69.9
GTEX-1HSEH-1926-SM-A96SB 60-69 years, male 69.5
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Colon - Transverse
Average nTPM: 35.5
Samples: 406

Max nTPM: 129.7
Min nTPM: 18.8
Std nTPM: 9.7
Median nTPM: 34.2
GTEX-13PL7-2526-SM-5IFGR 60-69 years, female 129.7
GTEX-1HSMQ-2726-SM-C1YRE 50-59 years, male 81.4
GTEX-14C39-1926-SM-5ZZW5 40-49 years, male 75.7
GTEX-14C5O-2526-SM-73KU2 60-69 years, male 63.8
GTEX-OOBJ-1426-SM-E6CHH 60-69 years, male 61.1
GTEX-ZVT2-1926-SM-5GU5T 50-59 years, female 60.0
GTEX-1L5NE-2026-SM-CXZKR 50-59 years, male 58.1
GTEX-16XZZ-2626-SM-6M47S 60-69 years, male 54.1
GTEX-YEC3-2426-SM-DO11A 50-59 years, male 53.9
GTEX-1I6K6-1826-SM-B2LX5 30-39 years, male 53.2
GTEX-XQ8I-2126-SM-4BOOM 50-59 years, male 53.0
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 13.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 13.3
FF:10014-101C5 62,83,84 years, mixed 13.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.