HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:28.7 nTPM
HPA:28.7 nTPM
GTEx:31.0 nTPM
FANTOM5:4.3 Scaled Tags Per Million
Pig:21.7 nTPM
Mouse:43.0 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 28.7
Sample id Sample description nTPM
Hippocampus
nTPM: 25.1
1855 Male, age 76, left hemisphere 28.2
1898 Male, age 80, left hemisphere 27.5
2148 Female, age 91, left hemisphere 25.2
2621 Female, age 67, right hemisphere 23.9
1911 Female, age 85, right hemisphere 23.3
2529 Female, age 94, left hemisphere 22.7
Dentate gyrus
nTPM: 25.3
2010 Male, age 76, both hemispheres 27.4
1927 Female, age 91, both hemispheres 26.8
2246 Female, age 85, both hemispheres 24.6
2528 Male, age 74, both hemispheres 24.6
2530 Female, age 94, left hemisphere 24.3
2531 Female, age 67, both hemispheres 24.3
Entorhinal gyrus
nTPM: 26.1
1938 Female, age 85, left hemisphere 28.0
2764 Male, age 80, right hemisphere 27.4
1787 Male, age 76, left hemisphere 27.3
2613 Female, age 94, left hemisphere 25.9
2686 Male, age 75, right hemisphere 24.0
2117 Female, age 91, right hemisphere 23.7
Hippocampus, CA1
nTPM: 26.8
2749 Male, age 80, left hemisphere 30.4
2045 Male, age 76, both hemispheres 28.8
1873 Female, age 85, both hemispheres 27.3
2082 Female, age 91, right hemisphere 23.7
2527 Male, age 74, both hemispheres 23.5
Hippocampus, CA2
nTPM: 25.7
1892 Male, age 76, both hemispheres 29.1
1963 Male, age 80, left hemisphere 27.0
1940 Female, age 85, left hemisphere 24.8
2249 Male, age 74, both hemispheres 24.6
2113 Female, age 91, right hemisphere 24.4
2437 Female, age 94, left hemisphere 24.1
Hippocampus, CA3
nTPM: 25.9
2137 Male, age 80, left hemisphere 29.0
1867 Male, age 76, both hemispheres 26.4
2620 Female, age 94, left hemisphere 25.9
2861 Female, age 67, both hemispheres 25.4
1891 Female, age 85, both hemispheres 24.8
2436 Male, age 74, both hemispheres 23.6
Parahippocampal cortex
nTPM: 26.0
1850 Male, age 80, both hemispheres 29.5
1933 Female, age 85, both hemispheres 26.9
2250 Female, age 67, right hemisphere 26.6
2532 Female, age 72, left hemisphere 26.0
2018 Male, age 76, both hemispheres 25.9
1990 Female, age 91, right hemisphere 25.7
2245 Female, age 91, both hemispheres 25.6
2622 Female, age 67, right hemisphere 25.3
2693 Female, age 94, both hemispheres 25.1
2692 Male, age 74, both hemispheres 23.9
Perirhinal gyrus
nTPM: 28.7
1841 Female, age 85, right hemisphere 30.7
1847 Female, age 91, left hemisphere 29.3
1794 Male, age 80, right hemisphere 29.1
2521 Female, age 94, right hemisphere 27.4
2848 Male, age 76, right hemisphere 27.2
Subiculum
nTPM: 24.1
1977 Female, age 85, both hemispheres 26.3
2729 Female, age 91, right hemisphere 24.3
2042 Male, age 76, both hemispheres 24.2
1901 Male, age 80, both hemispheres 24.0
2619 Male, age 74, both hemispheres 24.0
2438 Female, age 94, left hemisphere 22.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 31.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 31.0
Samples: 197

Max nTPM: 49.9
Min nTPM: 19.1
Std nTPM: 5.8
Median nTPM: 29.9
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 49.9
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 46.7
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 46.6
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 45.4
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 44.9
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 44.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 43.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 43.2
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 42.9
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 42.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 42.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 4.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 4.3
FF:10153-102I9 76 years, female 4.4
FF:10169-103B7 60 years, female 4.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 21.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 21.8
Samples: 4

Max nTPM: 27.6
Min nTPM: 18.3
Sample A Female 27.6
Sample B Female 19.7
Sample C Male 18.3
Sample D Male 21.4
Entorhinal cortex
nTPM: 19.9
Samples: 4

Max nTPM: 22.5
Min nTPM: 17.6
Sample A Female 22.5
Sample B Female 21.5
Sample C Male 18.0
Sample D Male 17.6
Subiculum
nTPM: 19.8
Samples: 4

Max nTPM: 28.1
Min nTPM: 15.9
Sample A Female 28.1
Sample B Female 17.6
Sample C Male 15.9
Sample D Male 17.7
Ventral hippocampus
nTPM: 18.6
Samples: 4

Max nTPM: 22.3
Min nTPM: 15.3
Sample A Female 22.3
Sample B Female 16.4
Sample C Male 15.3
Sample D Male 20.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 43.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 35.9
Samples: 4

Max nTPM: 41.2
Min nTPM: 33.8
Sample A Male 34.6
Sample B Male 33.8
Sample C Female 41.2
Sample D Female 34.0
Hippocampal formation
nTPM: 43.0
Samples: 4

Max nTPM: 47.2
Min nTPM: 38.4
Sample A Male 46.0
Sample B Male 38.4
Sample C Female 47.2
Sample D Female 40.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
70919675 Antisense, RP_050713_01_H03, Mouse strain C57BL/6J (56 days, male) 0.2

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