HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:44.1 nTPM
HPA:44.1 nTPM
GTEx:49.1 nTPM
FANTOM5:93.1 Scaled Tags Per Million
Pig:27.7 nTPM
Mouse:47.5 nTPM
Allen mouse:3.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA060766
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 44.1
Sample id Sample description nTPM
Hippocampus
nTPM: 42.2
1898 Male, age 80, left hemisphere 46.4
1855 Male, age 76, left hemisphere 44.6
2621 Female, age 67, right hemisphere 42.3
2148 Female, age 91, left hemisphere 40.4
2529 Female, age 94, left hemisphere 40.3
1911 Female, age 85, right hemisphere 38.9
Dentate gyrus
nTPM: 41.8
2530 Female, age 94, left hemisphere 46.3
1927 Female, age 91, both hemispheres 42.9
2010 Male, age 76, both hemispheres 42.8
2528 Male, age 74, both hemispheres 39.6
2531 Female, age 67, both hemispheres 39.5
2246 Female, age 85, both hemispheres 39.4
Entorhinal gyrus
nTPM: 40.5
2764 Male, age 80, right hemisphere 43.2
2117 Female, age 91, right hemisphere 42.1
1938 Female, age 85, left hemisphere 41.6
1787 Male, age 76, left hemisphere 40.9
2613 Female, age 94, left hemisphere 40.6
2686 Male, age 75, right hemisphere 34.5
Hippocampus, CA1
nTPM: 44.1
2749 Male, age 80, left hemisphere 56.5
1873 Female, age 85, both hemispheres 44.7
2527 Male, age 74, both hemispheres 44.0
2045 Male, age 76, both hemispheres 39.6
2082 Female, age 91, right hemisphere 35.8
Hippocampus, CA2
nTPM: 41.7
1963 Male, age 80, left hemisphere 49.2
1892 Male, age 76, both hemispheres 46.4
2437 Female, age 94, left hemisphere 44.6
2249 Male, age 74, both hemispheres 40.4
2113 Female, age 91, right hemisphere 36.4
1940 Female, age 85, left hemisphere 32.9
Hippocampus, CA3
nTPM: 40.1
2137 Male, age 80, left hemisphere 45.1
2436 Male, age 74, both hemispheres 41.0
1867 Male, age 76, both hemispheres 39.8
1891 Female, age 85, both hemispheres 39.1
2620 Female, age 94, left hemisphere 38.3
2861 Female, age 67, both hemispheres 37.2
Parahippocampal cortex
nTPM: 39.6
2532 Female, age 72, left hemisphere 43.9
1850 Male, age 80, both hemispheres 42.7
2250 Female, age 67, right hemisphere 39.6
1933 Female, age 85, both hemispheres 39.4
2622 Female, age 67, right hemisphere 39.3
1990 Female, age 91, right hemisphere 39.0
2018 Male, age 76, both hemispheres 38.7
2245 Female, age 91, both hemispheres 38.6
2693 Female, age 94, both hemispheres 37.8
2692 Male, age 74, both hemispheres 37.1
Perirhinal gyrus
nTPM: 41.6
1794 Male, age 80, right hemisphere 44.2
1841 Female, age 85, right hemisphere 42.9
1847 Female, age 91, left hemisphere 41.5
2848 Male, age 76, right hemisphere 40.1
2521 Female, age 94, right hemisphere 39.3
Subiculum
nTPM: 38.8
2729 Female, age 91, right hemisphere 40.6
2619 Male, age 74, both hemispheres 39.8
1977 Female, age 85, both hemispheres 39.6
1901 Male, age 80, both hemispheres 39.1
2042 Male, age 76, both hemispheres 38.6
2438 Female, age 94, left hemisphere 35.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 49.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 49.1
Samples: 197

Max nTPM: 79.0
Min nTPM: 19.0
Std nTPM: 8.6
Median nTPM: 48.2
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 79.0
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 74.0
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 70.8
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 69.4
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 69.2
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 67.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 65.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 64.8
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 63.6
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 63.5
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 63.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 93.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 93.1
FF:10169-103B7 60 years, female 110.9
FF:10153-102I9 76 years, female 75.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 27.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 27.7
Samples: 4

Max nTPM: 34.9
Min nTPM: 20.3
Sample A Female 34.9
Sample B Female 28.8
Sample C Male 26.7
Sample D Male 20.3
Entorhinal cortex
nTPM: 21.2
Samples: 4

Max nTPM: 24.8
Min nTPM: 17.2
Sample A Female 22.7
Sample B Female 24.8
Sample C Male 20.1
Sample D Male 17.2
Subiculum
nTPM: 23.4
Samples: 4

Max nTPM: 31.2
Min nTPM: 19.4
Sample A Female 31.2
Sample B Female 23.1
Sample C Male 19.9
Sample D Male 19.4
Ventral hippocampus
nTPM: 26.2
Samples: 4

Max nTPM: 29.9
Min nTPM: 21.4
Sample A Female 29.9
Sample B Female 21.4
Sample C Male 26.5
Sample D Male 26.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 47.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 47.5
Samples: 4

Max nTPM: 48.4
Min nTPM: 45.2
Sample A Male 45.2
Sample B Male 48.0
Sample C Female 48.4
Sample D Female 48.4
Hippocampal formation
nTPM: 47.4
Samples: 4

Max nTPM: 49.9
Min nTPM: 45.4
Sample A Male 47.7
Sample B Male 46.5
Sample C Female 45.4
Sample D Female 49.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.0
68797499 Antisense, RP_050125_02_E10, Mouse strain C57BL/6J (56 days, male) 3.0

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