HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:35.0 nTPM
HPA:35.0 nTPM
GTEx:35.4 nTPM
FANTOM5:124.3 Scaled Tags Per Million
Pig:50.6 nTPM
Mouse:49.7 nTPM
Allen mouse:1.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA010550
Glial cells Medium
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 35.0
Sample id Sample description nTPM
Hippocampus
nTPM: 34.1
1898 Male, age 80, left hemisphere 36.0
2529 Female, age 94, left hemisphere 34.9
2621 Female, age 67, right hemisphere 33.8
1855 Male, age 76, left hemisphere 33.7
1911 Female, age 85, right hemisphere 33.6
2148 Female, age 91, left hemisphere 32.5
Dentate gyrus
nTPM: 33.6
2010 Male, age 76, both hemispheres 36.8
2246 Female, age 85, both hemispheres 34.5
2528 Male, age 74, both hemispheres 34.1
1927 Female, age 91, both hemispheres 32.3
2530 Female, age 94, left hemisphere 32.2
2531 Female, age 67, both hemispheres 32.0
Entorhinal gyrus
nTPM: 32.9
2117 Female, age 91, right hemisphere 34.8
1938 Female, age 85, left hemisphere 34.6
2764 Male, age 80, right hemisphere 33.3
1787 Male, age 76, left hemisphere 32.6
2686 Male, age 75, right hemisphere 31.4
2613 Female, age 94, left hemisphere 30.9
Hippocampus, CA1
nTPM: 35.0
2749 Male, age 80, left hemisphere 37.2
1873 Female, age 85, both hemispheres 36.4
2527 Male, age 74, both hemispheres 35.0
2045 Male, age 76, both hemispheres 34.4
2082 Female, age 91, right hemisphere 32.0
Hippocampus, CA2
nTPM: 33.8
2249 Male, age 74, both hemispheres 35.8
1963 Male, age 80, left hemisphere 35.6
1940 Female, age 85, left hemisphere 34.0
1892 Male, age 76, both hemispheres 33.7
2113 Female, age 91, right hemisphere 32.2
2437 Female, age 94, left hemisphere 31.9
Hippocampus, CA3
nTPM: 34.2
1867 Male, age 76, both hemispheres 37.1
2137 Male, age 80, left hemisphere 36.5
2436 Male, age 74, both hemispheres 36.2
1891 Female, age 85, both hemispheres 33.6
2620 Female, age 94, left hemisphere 31.9
2861 Female, age 67, both hemispheres 30.0
Parahippocampal cortex
nTPM: 33.9
2018 Male, age 76, both hemispheres 36.5
1850 Male, age 80, both hemispheres 35.8
2532 Female, age 72, left hemisphere 35.2
1933 Female, age 85, both hemispheres 35.1
1990 Female, age 91, right hemisphere 34.6
2250 Female, age 67, right hemisphere 33.7
2245 Female, age 91, both hemispheres 33.3
2693 Female, age 94, both hemispheres 32.1
2692 Male, age 74, both hemispheres 32.0
2622 Female, age 67, right hemisphere 30.3
Perirhinal gyrus
nTPM: 34.7
1841 Female, age 85, right hemisphere 36.4
1794 Male, age 80, right hemisphere 36.3
2521 Female, age 94, right hemisphere 34.9
1847 Female, age 91, left hemisphere 34.2
2848 Male, age 76, right hemisphere 31.6
Subiculum
nTPM: 34.3
1977 Female, age 85, both hemispheres 35.6
2438 Female, age 94, left hemisphere 35.6
1901 Male, age 80, both hemispheres 35.3
2042 Male, age 76, both hemispheres 33.9
2729 Female, age 91, right hemisphere 33.2
2619 Male, age 74, both hemispheres 32.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 35.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 35.4
Samples: 197

Max nTPM: 108.0
Min nTPM: 21.9
Std nTPM: 9.2
Median nTPM: 33.5
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 108.0
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 73.0
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 72.4
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 63.8
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 62.1
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 60.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 58.0
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 52.4
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 50.6
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 50.3
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 49.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 124.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 124.3
FF:10169-103B7 60 years, female 148.5
FF:10153-102I9 76 years, female 100.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 50.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 50.6
Samples: 4

Max nTPM: 60.7
Min nTPM: 43.8
Sample A Female 60.7
Sample B Female 49.1
Sample C Male 48.9
Sample D Male 43.8
Entorhinal cortex
nTPM: 42.8
Samples: 4

Max nTPM: 46.1
Min nTPM: 37.9
Sample A Female 42.7
Sample B Female 44.3
Sample C Male 46.1
Sample D Male 37.9
Subiculum
nTPM: 46.0
Samples: 4

Max nTPM: 55.3
Min nTPM: 42.0
Sample A Female 55.3
Sample B Female 43.8
Sample C Male 42.0
Sample D Male 43.0
Ventral hippocampus
nTPM: 44.0
Samples: 4

Max nTPM: 47.3
Min nTPM: 38.6
Sample A Female 47.3
Sample B Female 38.6
Sample C Male 44.3
Sample D Male 45.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 49.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 49.7
Samples: 4

Max nTPM: 55.3
Min nTPM: 44.2
Sample A Male 44.2
Sample B Male 55.3
Sample C Female 52.2
Sample D Female 47.1
Hippocampal formation
nTPM: 49.6
Samples: 4

Max nTPM: 56.6
Min nTPM: 45.8
Sample A Male 56.6
Sample B Male 49.4
Sample C Female 45.8
Sample D Female 46.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.1
70565431 Antisense, RP_050623_04_H10, Mouse strain C57BL/6J (56 days, male) 1.1

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