HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:25.2 nTPM
HPA:25.2 nTPM
GTEx:22.6 nTPM
FANTOM5:23.4 Scaled Tags Per Million
Pig:24.8 nTPM
Mouse:14.7 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 25.2
Sample id Sample description nTPM
Hippocampus
nTPM: 23.5
2529 Female, age 94, left hemisphere 26.3
2621 Female, age 67, right hemisphere 25.5
2148 Female, age 91, left hemisphere 23.6
1911 Female, age 85, right hemisphere 23.3
1898 Male, age 80, left hemisphere 21.5
1855 Male, age 76, left hemisphere 20.8
Dentate gyrus
nTPM: 23.7
2531 Female, age 67, both hemispheres 30.2
2246 Female, age 85, both hemispheres 24.8
2528 Male, age 74, both hemispheres 23.3
2010 Male, age 76, both hemispheres 22.7
2530 Female, age 94, left hemisphere 22.3
1927 Female, age 91, both hemispheres 18.9
Entorhinal gyrus
nTPM: 25.2
2613 Female, age 94, left hemisphere 28.1
2686 Male, age 75, right hemisphere 27.1
2117 Female, age 91, right hemisphere 26.2
2764 Male, age 80, right hemisphere 24.8
1938 Female, age 85, left hemisphere 22.5
1787 Male, age 76, left hemisphere 22.4
Hippocampus, CA1
nTPM: 20.3
2082 Female, age 91, right hemisphere 23.6
1873 Female, age 85, both hemispheres 21.8
2045 Male, age 76, both hemispheres 21.1
2527 Male, age 74, both hemispheres 20.5
2749 Male, age 80, left hemisphere 14.3
Hippocampus, CA2
nTPM: 21.0
1963 Male, age 80, left hemisphere 25.3
2113 Female, age 91, right hemisphere 24.1
2249 Male, age 74, both hemispheres 21.8
2437 Female, age 94, left hemisphere 19.5
1940 Female, age 85, left hemisphere 18.9
1892 Male, age 76, both hemispheres 16.3
Hippocampus, CA3
nTPM: 22.3
2861 Female, age 67, both hemispheres 29.4
2436 Male, age 74, both hemispheres 27.5
1891 Female, age 85, both hemispheres 22.8
1867 Male, age 76, both hemispheres 19.5
2620 Female, age 94, left hemisphere 18.8
2137 Male, age 80, left hemisphere 15.7
Parahippocampal cortex
nTPM: 21.2
2692 Male, age 74, both hemispheres 25.0
1990 Female, age 91, right hemisphere 24.1
1933 Female, age 85, both hemispheres 23.9
2622 Female, age 67, right hemisphere 21.7
2018 Male, age 76, both hemispheres 21.3
2250 Female, age 67, right hemisphere 20.7
2532 Female, age 72, left hemisphere 19.8
2245 Female, age 91, both hemispheres 18.8
1850 Male, age 80, both hemispheres 18.4
2693 Female, age 94, both hemispheres 18.2
Perirhinal gyrus
nTPM: 18.4
1847 Female, age 91, left hemisphere 20.3
2848 Male, age 76, right hemisphere 19.6
2521 Female, age 94, right hemisphere 17.7
1794 Male, age 80, right hemisphere 17.3
1841 Female, age 85, right hemisphere 17.2
Subiculum
nTPM: 22.3
2042 Male, age 76, both hemispheres 24.9
2729 Female, age 91, right hemisphere 24.2
1977 Female, age 85, both hemispheres 23.6
2619 Male, age 74, both hemispheres 22.5
1901 Male, age 80, both hemispheres 20.8
2438 Female, age 94, left hemisphere 17.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 22.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 22.6
Samples: 197

Max nTPM: 56.8
Min nTPM: 8.6
Std nTPM: 7.3
Median nTPM: 21.2
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 56.8
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 43.3
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 42.9
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 40.8
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 40.5
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 39.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 39.1
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 38.8
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 38.0
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 37.6
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 36.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 23.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 23.4
FF:10153-102I9 76 years, female 35.3
FF:10169-103B7 60 years, female 11.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 24.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 21.4
Samples: 4

Max nTPM: 25.6
Min nTPM: 15.9
Sample A Female 25.6
Sample B Female 22.2
Sample C Male 21.8
Sample D Male 15.9
Entorhinal cortex
nTPM: 24.8
Samples: 4

Max nTPM: 27.6
Min nTPM: 22.4
Sample A Female 24.2
Sample B Female 25.1
Sample C Male 27.6
Sample D Male 22.4
Subiculum
nTPM: 22.4
Samples: 4

Max nTPM: 28.9
Min nTPM: 17.4
Sample A Female 28.9
Sample B Female 22.3
Sample C Male 21.1
Sample D Male 17.4
Ventral hippocampus
nTPM: 22.8
Samples: 4

Max nTPM: 29.7
Min nTPM: 17.6
Sample A Female 21.8
Sample B Female 17.6
Sample C Male 29.7
Sample D Male 22.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 14.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 11.0
Samples: 4

Max nTPM: 12.8
Min nTPM: 9.2
Sample A Male 9.9
Sample B Male 9.2
Sample C Female 12.8
Sample D Female 12.2
Hippocampal formation
nTPM: 14.7
Samples: 4

Max nTPM: 15.3
Min nTPM: 13.1
Sample A Male 13.1
Sample B Male 15.2
Sample C Female 15.1
Sample D Female 15.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
69528034 Antisense, RP_050421_03_A02, Mouse strain C57BL/6J (56 days, male) 0.2

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