COLON - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:14.0 nTPM
HPA:7.3 nTPM
GTEx:14.0 nTPM
FANTOM5:21.5 Scaled Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average nTPM 7.3
overview
Male, age 54 		Colon sample 67
nTPM: 6.1
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 8.1
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 5
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 5.6
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 6.5
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 9
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 6.6
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 7
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 7.5
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 7.6
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 8.7
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 8.5
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 9.3
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 14.0
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 14.0
Samples: 373

Max nTPM: 27.5
Min nTPM: 5.2
Std nTPM: 3.6
Median nTPM: 13.7
GTEX-1HSMO-2526-SM-A9SKP 60-69 years, male 27.5
GTEX-ZYY3-2226-SM-5E45A 60-69 years, female 27.4
GTEX-15G19-2726-SM-6LPKG 60-69 years, male 26.7
GTEX-1212Z-1826-SM-5FQSH 60-69 years, male 25.7
GTEX-12WSM-1426-SM-5GCPA 60-69 years, male 25.4
GTEX-1HBPM-2626-SM-9WYU5 60-69 years, female 23.4
GTEX-12ZZX-2726-SM-5N9FT 40-49 years, female 22.8
GTEX-1QCLZ-2026-SM-EAZ4A 60-69 years, female 22.1
GTEX-14A5I-2426-SM-5Q5CP 50-59 years, female 21.9
GTEX-1GMRU-2626-SM-9WPPM 50-59 years, male 21.8
GTEX-1J8EW-2426-SM-CE6T5 60-69 years, female 21.8
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Colon - Transverse
Average nTPM: 9.9
Samples: 406

Max nTPM: 21.5
Min nTPM: 2.6
Std nTPM: 3.8
Median nTPM: 9.3
GTEX-1LG7Y-2126-SM-DIPER 50-59 years, male 21.5
GTEX-1POEN-2026-SM-E6CRL 30-39 years, female 21.1
GTEX-OXRO-0726-SM-E9U4C 60-69 years, female 20.7
GTEX-WVJS-2426-SM-EZ6LI 50-59 years, male 20.4
GTEX-R45C-2126-SM-EZ6KZ 60-69 years, female 20.2
GTEX-1GZ4I-2426-SM-9WPPP 50-59 years, male 19.4
GTEX-1JMLX-2726-SM-CM2SB 50-59 years, male 19.3
GTEX-WY7C-1626-SM-4ONC8 50-59 years, male 19.0
GTEX-17HII-2726-SM-7MGVM 50-59 years, male 18.6
GTEX-1F75B-2726-SM-7P8QO 50-59 years, male 18.6
GTEX-U3ZH-1326-SM-4DXSF 30-39 years, male 18.3
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 21.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 21.5
FF:10014-101C5 62,83,84 years, mixed 21.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.