PONS AND MEDULLA - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:60.5 nTPM
HPA:60.5 nTPM
FANTOM5:78.2 Scaled Tags Per Million
Pig:73.9 nTPM
Mouse:78.7 nTPM
Allen mouse:0.9 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max nTPM 60.5
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 56.4
2301 Female, age 85, both hemispheres 57.3
2090 Male, age 80, both hemispheres 56.2
1984 Male, age 76, both hemispheres 56.0
2188 Female, age 91, both hemispheres 56.0
Area postrema
nTPM: 60.3
2799 Male, age 61, both hemispheres 62.3
2306 Male, age 80, both hemispheres 61.0
2054 Male, age 76, both hemispheres 57.7
Cuneate nuclei
nTPM: 54.0
2381 Male, age 80, both hemispheres 55.5
2131 Male, age 76, both hemispheres 53.8
2376 Male, age 61, both hemispheres 52.6
Dorsal cochlear nucleus
nTPM: 55.4
2802 Male, age 74, right hemisphere 58.0
2187 Female, age 91, both hemispheres 57.2
2378 Male, age 80, both hemispheres 55.5
2058 Male, age 76, both hemispheres 54.2
2370 Male, age 61, both hemispheres 52.2
Dorsal medullary reticular nucleus
nTPM: 52.3
2040 Female, age 85, both hemispheres 53.4
2373 Male, age 61, both hemispheres 53.1
2088 Male, age 76, both hemispheres 50.5
Dorsal motor vagal complex
nTPM: 57.1
2813 Female, age 72, unknown 63.2
2844 Male, age 55, unknown 59.6
2643 Male, age 74, both hemispheres 58.1
2133 Female, age 91, both hemispheres 57.7
2807 Female, age 85, both hemispheres 55.8
2185 Male, age 76, both hemispheres 54.8
2000 Male, age 74, unknown 54.2
2797 Male, age 61, both hemispheres 53.5
Dorsal tegmental nucleus
nTPM: 57.7
2358 Male, age 61, both hemispheres 64.8
2083 Male, age 80, both hemispheres 58.1
2326 Male, age 74, both hemispheres 54.8
1936 Male, age 76, left hemisphere 52.9
Dorsolateral tegmental area
nTPM: 58.4
2337 Male, age 61, both hemispheres 62.9
2141 Male, age 76, both hemispheres 59.9
2654 Male, age 80, both hemispheres 58.0
2751 Female, age 85, both hemispheres 56.6
2360 Male, age 74, both hemispheres 54.6
Gigantocellular reticular nuclei, medullary
nTPM: 54.9
2314 Male, age 61, both hemispheres 60.9
2462 Male, age 74, both hemispheres 55.5
2387 Female, age 91, both hemispheres 55.0
1876 Female, age 85, both hemispheres 52.8
2022 Male, age 76, right hemisphere 52.6
2310 Male, age 80, both hemispheres 52.4
Gigantocellular reticular nuclei, pars
nTPM: 55.3
2330 Male, age 80, both hemispheres 56.8
2706 Male, age 80, both hemispheres 55.8
2336 Male, age 61, both hemispheres 55.0
2168 Male, age 76, both hemispheres 54.6
2084 Female, age 85, both hemispheres 54.2
Inferior olive
nTPM: 58.9
2628 Female, age 91, both hemispheres 61.1
2563 Male, age 74, both hemispheres 59.8
2085 Female, age 85, both hemispheres 59.0
2178 Male, age 61, both hemispheres 58.1
2379 Male, age 80, both hemispheres 56.5
Kolliker-Fuse nucleus
nTPM: 57.0
2315 Male, age 76, right hemisphere 59.6
2793 Female, age 91, left hemisphere 56.3
2163 Male, age 80, both hemispheres 55.2
Lateral lemniscal nuclei
nTPM: 52.0
2169 Male, age 76, both hemispheres 57.9
2746 Female, age 85, left hemisphere 57.4
2453 Male, age 74, right hemisphere 53.0
2320 Female, age 91, left hemisphere 50.5
2036 Male, age 80, both hemispheres 40.9
Lateral medullary reticular nucleus
nTPM: 59.2
2374 Male, age 61, both hemispheres 65.7
2804 Female, age 91, both hemispheres 60.8
2852 Male, age 80, both hemispheres 58.6
2190 Female, age 85, both hemispheres 58.2
2305 Male, age 74, both hemispheres 58.2
2044 Male, age 76, both hemispheres 53.8
Lateral parabrachial nucleus
nTPM: 55.4
2139 Female, age 85, right hemisphere 59.9
2013 Male, age 80, both hemispheres 55.9
2792 Male, age 76, both hemispheres 54.5
2790 Male, age 61, both hemispheres 51.3
Lateral vestibular nucleus
nTPM: 56.0
2311 Male, age 80, both hemispheres 58.0
2184 Male, age 76, both hemispheres 54.0
Locus coeruleus
nTPM: 57.6
2123 Female, age 91, both hemispheres 61.3
2014 Male, age 55, unknown 59.0
2720 Male, age 74, both hemispheres 58.3
2788 Male, age 74, unknown 56.4
1980 Male, age 76, both hemispheres 56.3
2317 Female, age 72, unknown 56.2
2162 Male, age 80, both hemispheres 55.8
Medial olivary nucleus
nTPM: 60.5
2851 Male, age 80, both hemispheres 63.0
2138 Female, age 91, both hemispheres 61.1
1943 Male, age 61, both hemispheres 61.0
1962 Male, age 76, both hemispheres 57.0
Medial parabrachial nucleus
nTPM: 56.2
2854 Male, age 80, both hemispheres 60.2
2170 Female, age 91, both hemispheres 58.4
2463 Female, age 85, right hemisphere 55.7
2786 Male, age 76, both hemispheres 54.6
2156 Male, age 61, both hemispheres 51.9
Medial periolivary nuclei
nTPM: 55.1
2063 Male, age 76, both hemispheres 57.2
2791 Male, age 74, right hemisphere 56.4
2171 Female, age 85, both hemispheres 55.0
2081 Male, age 80, both hemispheres 54.9
2458 Female, age 91, both hemispheres 52.1
Medial vestibular nucleus
nTPM: 57.5
2624 Male, age 61, both hemispheres 60.1
2801 Male, age 74, both hemispheres 59.0
2803 Female, age 91, both hemispheres 57.3
2093 Male, age 80, both hemispheres 56.6
2743 Female, age 85, both hemispheres 56.4
2134 Male, age 76, both hemispheres 55.7
Motor facial nucleus
nTPM: 56.6
2365 Male, age 74, right hemisphere 60.8
2697 Female, age 85, both hemispheres 59.3
2795 Female, age 91, both hemispheres 57.5
2062 Male, age 76, both hemispheres 56.7
2126 Male, age 61, both hemispheres 53.7
2327 Male, age 80, both hemispheres 51.7
Motor hypoglossal nucleus
nTPM: 56.8
2461 Male, age 61, both hemispheres 62.2
2132 Female, age 85, both hemispheres 57.7
2182 Male, age 80, both hemispheres 55.8
2125 Female, age 91, both hemispheres 55.0
2277 Male, age 76, both hemispheres 53.3
Motor trigeminal nucleus
nTPM: 52.6
2335 Male, age 61, both hemispheres 54.4
2079 Male, age 80, both hemispheres 52.8
2560 Male, age 74, both hemispheres 52.4
2309 Male, age 76, both hemispheres 52.0
2321 Female, age 91, both hemispheres 51.5
Nuclei of the trapezoid body
nTPM: 53.9
1983 Male, age 76, both hemispheres 58.5
2735 Female, age 85, both hemispheres 55.4
2159 Male, age 61, both hemispheres 52.8
2166 Male, age 80, both hemispheres 52.4
2368 Female, age 91, both hemispheres 50.4
Nucleus ambiguus
nTPM: 57.1
2071 Male, age 76, both hemispheres 60.1
2096 Female, age 85, both hemispheres 54.1
Nucleus cuneatus
nTPM: 55.1
2808 Female, age 85, both hemispheres 60.1
2564 Male, age 74, both hemispheres 57.3
2380 Male, age 80, both hemispheres 55.0
2562 Male, age 61, both hemispheres 53.9
2805 Female, age 91, both hemispheres 52.9
2100 Male, age 76, both hemispheres 51.7
Nucleus gracilis
nTPM: 59.8
2627 Male, age 74, both hemispheres 64.1
2382 Male, age 80, both hemispheres 58.3
2299 Female, age 85, both hemispheres 57.0
Nucleus raphe magnus
nTPM: 55.9
2160 Male, age 61, both hemispheres 60.1
2172 Female, age 85, both hemispheres 58.5
2051 Male, age 76, both hemispheres 56.2
2455 Male, age 74, both hemispheres 55.9
2328 Male, age 80, both hemispheres 54.1
2459 Female, age 91, both hemispheres 50.8
Nucleus raphe obscurus
nTPM: 57.7
2845 Female, age 85, midline 61.7
2800 Male, age 61, midline 56.3
2142 Male, age 76, midline 54.9
Nucleus raphe pallidus
nTPM: 58.7
1924 Male, age 61, midline 62.3
2183 Male, age 80, midline 58.2
2145 Male, age 76, midline 55.6
Nucleus tractus solitarii
nTPM: 54.5
2191 Female, age 85, both hemispheres 56.7
2656 Male, age 76, both hemispheres 56.2
2144 Female, age 91, right hemisphere 53.3
2307 Male, age 80, both hemispheres 51.9
Paramedian reticular nucleus
nTPM: 53.1
2050 Female, age 85, both hemispheres 56.0
2313 Male, age 61, both hemispheres 54.3
2057 Male, age 80, both hemispheres 52.4
2052 Male, age 76, both hemispheres 49.6
Parvicellular reticular nuclei
nTPM: 53.3
2119 Male, age 80, both hemispheres 55.8
2095 Male, age 76, both hemispheres 53.3
2558 Male, age 74, both hemispheres 50.9
Parvicellular reticular nuclei, medullary
nTPM: 56.4
2181 Male, age 80, left hemisphere 57.3
2189 Female, age 91, both hemispheres 56.4
2091 Female, age 85, both hemispheres 55.5
Peritrigeminal nucleus
nTPM: 57.2
2067 Female, age 85, both hemispheres 58.8
2136 Male, age 76, both hemispheres 56.7
2179 Male, age 61, both hemispheres 56.1
Pontine nuclei
nTPM: 55.9
2787 Female, age 85, both hemispheres 63.9
2727 Male, age 61, right hemisphere 58.0
1863 Male, age 55, unknown 56.5
2109 Female, age 72, unknown 54.3
2115 Male, age 80, left hemisphere 54.3
1968 Male, age 76, left hemisphere 54.1
2454 Male, age 74, left hemisphere 53.1
2319 Female, age 91, both hemispheres 52.6
Pontine raphe nucleus
nTPM: 57.1
2122 Female, age 85, midline 57.1
2853 Male, age 76, midline 57.1
Posteroventral cochlear nucleus
nTPM: 55.5
2341 Male, age 80, both hemispheres 57.4
2135 Female, age 91, both hemispheres 56.2
2752 Female, age 85, both hemispheres 56.0
2070 Male, age 76, both hemispheres 55.6
2371 Male, age 61, both hemispheres 52.6
Prepositus hypoglossal nucleus
nTPM: 57.3
2086 Male, age 80, both hemispheres 57.9
2855 Female, age 85, right hemisphere 56.8
Principal sensory trigeminal nucleus
nTPM: 52.9
2158 Male, age 61, both hemispheres 55.1
2324 Male, age 76, both hemispheres 54.5
2367 Female, age 91, left hemisphere 52.5
2008 Male, age 80, left hemisphere 49.4
Reticular pontine nucleus, caudal
nTPM: 53.3
2092 Male, age 76, both hemispheres 58.5
2332 Male, age 80, right hemisphere 52.4
2457 Female, age 91, both hemispheres 51.2
2559 Male, age 74, both hemispheres 51.1
Reticular pontine nucleus, oral
nTPM: 54.7
2167 Male, age 76, both hemispheres 56.6
2366 Female, age 91, both hemispheres 55.9
1939 Male, age 80, both hemispheres 55.6
2012 Female, age 85, both hemispheres 53.7
2361 Male, age 74, both hemispheres 51.9
Reticulotegmental nucleus
nTPM: 55.7
2325 Male, age 76, both hemispheres 56.7
2322 Female, age 91, both hemispheres 56.6
2452 Male, age 74, both hemispheres 55.0
2333 Male, age 80, both hemispheres 54.5
Spinal trigeminal nucleus, caudal
nTPM: 54.7
2642 Male, age 74, both hemispheres 57.1
2390 Female, age 91, both hemispheres 55.8
2312 Male, age 61, both hemispheres 54.4
2308 Male, age 80, both hemispheres 54.1
2447 Male, age 76, both hemispheres 51.9
Spinal trigeminal nucleus, interpolar
nTPM: 56.5
2625 Male, age 61, both hemispheres 59.5
2389 Female, age 91, both hemispheres 57.6
2386 Female, age 85, both hemispheres 55.8
2066 Male, age 76, right hemisphere 55.0
2033 Male, age 80, both hemispheres 54.4
Spinal trigeminal nucleus, oral
nTPM: 54.2
2164 Male, age 80, both hemispheres 56.1
1978 Male, age 76, both hemispheres 53.9
2737 Female, age 85, both hemispheres 52.7
Spinal vestibular nucleus
nTPM: 55.8
2796 Male, age 61, both hemispheres 57.9
2806 Female, age 85, both hemispheres 57.2
2780 Male, age 80, both hemispheres 56.6
2748 Male, age 76, both hemispheres 55.8
2186 Female, age 91, both hemispheres 55.2
2384 Male, age 74, both hemispheres 52.1
Subcoeruleus area
nTPM: 54.5
1958 Male, age 80, both hemispheres 57.1
2323 Female, age 91, left hemisphere 56.3
2369 Female, age 85, left hemisphere 56.2
2451 Male, age 74, both hemispheres 52.7
2089 Male, age 76, left hemisphere 50.2
Superior olive
nTPM: 53.8
1875 Female, age 85, both hemispheres 55.4
2020 Male, age 76, both hemispheres 54.0
2364 Male, age 74, right hemisphere 54.0
2561 Female, age 91, both hemispheres 53.1
2329 Male, age 80, right hemisphere 52.5
Superior vestibular nucleus
nTPM: 58.5
2383 Male, age 74, both hemispheres 63.3
2061 Male, age 76, both hemispheres 56.3
2015 Male, age 80, both hemispheres 56.0
Ventral medullary reticular nucleus
nTPM: 55.1
2372 Male, age 61, both hemispheres 55.3
2060 Male, age 76, both hemispheres 54.8
Ventral periolivary nuclei
nTPM: 55.2
2130 Female, age 85, both hemispheres 57.3
2023 Male, age 76, both hemispheres 55.7
2165 Male, age 80, both hemispheres 55.7
2794 Female, age 91, left hemisphere 52.3
Ventrolateral medulla, A1-C1 cell groups
nTPM: 56.9
2180 Male, age 61, both hemispheres 59.0
1986 Male, age 76, both hemispheres 56.5
2118 Male, age 80, both hemispheres 56.5
2302 Female, age 91, both hemispheres 56.4
2741 Female, age 85, both hemispheres 56.2
Ventrolateral tegmental area, A5 NE cell group
nTPM: 55.8
2840 Female, age 85, both hemispheres 60.3
1959 Male, age 76, both hemispheres 56.8
2359 Male, age 61, both hemispheres 56.5
2161 Male, age 80, both hemispheres 56.0
2449 Male, age 74, both hemispheres 55.1
2456 Female, age 91, both hemispheres 50.1

PONS AND MEDULLA - FANTOM5 CAGEi
Max Scaled Tags Per Million 78.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 66.3
FF:10182-103D2 60 years, female 73.8
FF:10165-103B3 76 years, female 58.7
Medulla oblongata
Scaled Tags Per Million: 78.2
FF:10174-103C3 60 years, female 87.5
FF:10038-101F2 18-64 years, mixed 77.1
FF:10155-103A2 76 years, female 69.9
Pons
Scaled Tags Per Million: 62.6
FF:10033-101E6 18-54 years, mixed 62.6

PONS AND MEDULLA - Pig RNA-seqi
Average nTPM 73.9
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 72.8
Samples: 4

Max nTPM: 75.7
Min nTPM: 69.4
Sample A Female 72.7
Sample B Female 69.4
Sample C Male 73.4
Sample D Male 75.7
Pons
nTPM: 73.9
Samples: 4

Max nTPM: 81.5
Min nTPM: 64.8
Sample A Female 76.0
Sample B Female 64.8
Sample C Male 73.3
Sample D Male 81.5

PONS AND MEDULLA - Mouse RNA-seqi
Average nTPM 78.7
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 78.7
Samples: 4

Max nTPM: 81.2
Min nTPM: 75.7
Sample A Male 75.7
Sample B Male 77.3
Sample C Female 81.2
Sample D Female 80.7

PONS AND MEDULLA - Allen Mouse ISHi
Max Expression energy 0.9
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 0.2
68443166 Antisense, RP_050111_01_E03, Mouse strain C57BL/6J (56 days, male) 0.2
Pons
Expression energy: 0.9
68443166 Antisense, RP_050111_01_E03, Mouse strain C57BL/6J (56 days, male) 0.9

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