HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:124.0 nTPM
HPA:124.0 nTPM
GTEx:99.7 nTPM
FANTOM5:186.1 Scaled Tags Per Million
Pig:162.4 nTPM
Mouse:592.1 nTPM
Allen mouse:13.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA008147
Glial cells Not detected
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 124.0
Sample id Sample description nTPM
Hippocampus
nTPM: 75.7
1898 Male, age 80, left hemisphere 115.1
1855 Male, age 76, left hemisphere 82.4
2621 Female, age 67, right hemisphere 78.3
2148 Female, age 91, left hemisphere 67.9
2529 Female, age 94, left hemisphere 55.5
1911 Female, age 85, right hemisphere 55.2
Dentate gyrus
nTPM: 84.8
1927 Female, age 91, both hemispheres 118.0
2010 Male, age 76, both hemispheres 99.5
2530 Female, age 94, left hemisphere 78.2
2528 Male, age 74, both hemispheres 76.0
2246 Female, age 85, both hemispheres 71.8
2531 Female, age 67, both hemispheres 65.4
Entorhinal gyrus
nTPM: 82.6
2764 Male, age 80, right hemisphere 106.2
1938 Female, age 85, left hemisphere 90.5
1787 Male, age 76, left hemisphere 89.9
2613 Female, age 94, left hemisphere 88.3
2117 Female, age 91, right hemisphere 61.6
2686 Male, age 75, right hemisphere 59.0
Hippocampus, CA1
nTPM: 92.5
2749 Male, age 80, left hemisphere 148.5
1873 Female, age 85, both hemispheres 96.7
2045 Male, age 76, both hemispheres 84.9
2082 Female, age 91, right hemisphere 66.2
2527 Male, age 74, both hemispheres 66.2
Hippocampus, CA2
nTPM: 86.4
1892 Male, age 76, both hemispheres 123.2
1963 Male, age 80, left hemisphere 122.0
2437 Female, age 94, left hemisphere 73.1
1940 Female, age 85, left hemisphere 70.3
2249 Male, age 74, both hemispheres 66.8
2113 Female, age 91, right hemisphere 62.7
Hippocampus, CA3
nTPM: 79.1
2137 Male, age 80, left hemisphere 101.9
1867 Male, age 76, both hemispheres 93.5
2620 Female, age 94, left hemisphere 79.0
2436 Male, age 74, both hemispheres 74.1
1891 Female, age 85, both hemispheres 66.1
2861 Female, age 67, both hemispheres 60.1
Parahippocampal cortex
nTPM: 86.6
1850 Male, age 80, both hemispheres 123.5
1990 Female, age 91, right hemisphere 98.3
1933 Female, age 85, both hemispheres 95.2
2693 Female, age 94, both hemispheres 91.9
2250 Female, age 67, right hemisphere 90.4
2245 Female, age 91, both hemispheres 88.6
2018 Male, age 76, both hemispheres 83.7
2532 Female, age 72, left hemisphere 81.1
2692 Male, age 74, both hemispheres 56.7
2622 Female, age 67, right hemisphere 56.4
Perirhinal gyrus
nTPM: 124.0
1847 Female, age 91, left hemisphere 149.7
1794 Male, age 80, right hemisphere 134.3
2521 Female, age 94, right hemisphere 126.5
1841 Female, age 85, right hemisphere 110.5
2848 Male, age 76, right hemisphere 98.9
Subiculum
nTPM: 68.4
1977 Female, age 85, both hemispheres 90.7
1901 Male, age 80, both hemispheres 78.8
2619 Male, age 74, both hemispheres 63.4
2438 Female, age 94, left hemisphere 60.3
2729 Female, age 91, right hemisphere 59.7
2042 Male, age 76, both hemispheres 57.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 99.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 99.7
Samples: 197

Max nTPM: 363.3
Min nTPM: 32.3
Std nTPM: 54.2
Median nTPM: 88.7
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 363.3
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 244.2
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 239.9
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 233.0
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 230.2
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 223.1
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 220.9
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 218.0
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 217.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 206.3
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 202.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 186.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 186.1
FF:10169-103B7 60 years, female 256.3
FF:10153-102I9 76 years, female 115.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 162.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 162.4
Samples: 4

Max nTPM: 205.1
Min nTPM: 120.8
Sample A Female 205.1
Sample B Female 179.1
Sample C Male 144.7
Sample D Male 120.8
Entorhinal cortex
nTPM: 136.2
Samples: 4

Max nTPM: 150.9
Min nTPM: 116.5
Sample A Female 150.9
Sample B Female 141.6
Sample C Male 135.6
Sample D Male 116.5
Subiculum
nTPM: 145.2
Samples: 4

Max nTPM: 178.7
Min nTPM: 132.4
Sample A Female 178.7
Sample B Female 132.4
Sample C Male 137.0
Sample D Male 132.8
Ventral hippocampus
nTPM: 151.8
Samples: 4

Max nTPM: 182.7
Min nTPM: 104.4
Sample A Female 182.7
Sample B Female 104.4
Sample C Male 173.1
Sample D Male 147.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 592.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 592.1
Samples: 4

Max nTPM: 670.9
Min nTPM: 535.7
Sample A Male 535.7
Sample B Male 586.2
Sample C Female 575.5
Sample D Female 670.9
Hippocampal formation
nTPM: 539.1
Samples: 4

Max nTPM: 602.2
Min nTPM: 492.6
Sample A Male 602.2
Sample B Male 513.9
Sample C Female 547.5
Sample D Female 492.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 13.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 13.0
129 Antisense, RP_040315_01_14, Mouse strain C57BL/6J (56 days, male) 13.0
130 Antisense, RP_040315_01_14, Mouse strain C57BL/6J (56 days, male) 11.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
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