HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:257.6 nTPM
HPA:257.6 nTPM
GTEx:348.4 nTPM
FANTOM5:385.1 Scaled Tags Per Million
Pig:131.5 nTPM
Mouse:576.5 nTPM
Allen mouse:9.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042768
Glial cells Not detected
Neuronal cells Medium


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 257.6
Sample id Sample description nTPM
Hippocampus
nTPM: 252.4
2529 Female, age 94, left hemisphere 272.7
1898 Male, age 80, left hemisphere 261.6
2621 Female, age 67, right hemisphere 258.2
1855 Male, age 76, left hemisphere 243.7
1911 Female, age 85, right hemisphere 241.1
2148 Female, age 91, left hemisphere 237.1
Dentate gyrus
nTPM: 241.1
2010 Male, age 76, both hemispheres 246.0
2246 Female, age 85, both hemispheres 245.0
2530 Female, age 94, left hemisphere 245.0
2531 Female, age 67, both hemispheres 242.9
1927 Female, age 91, both hemispheres 241.6
2528 Male, age 74, both hemispheres 226.3
Entorhinal gyrus
nTPM: 247.5
2764 Male, age 80, right hemisphere 255.3
1938 Female, age 85, left hemisphere 252.1
1787 Male, age 76, left hemisphere 251.0
2117 Female, age 91, right hemisphere 243.5
2613 Female, age 94, left hemisphere 241.9
2686 Male, age 75, right hemisphere 241.5
Hippocampus, CA1
nTPM: 246.7
2749 Male, age 80, left hemisphere 266.2
2527 Male, age 74, both hemispheres 255.1
1873 Female, age 85, both hemispheres 246.7
2045 Male, age 76, both hemispheres 235.7
2082 Female, age 91, right hemisphere 229.9
Hippocampus, CA2
nTPM: 248.2
1892 Male, age 76, both hemispheres 261.7
2437 Female, age 94, left hemisphere 261.5
1963 Male, age 80, left hemisphere 253.3
1940 Female, age 85, left hemisphere 242.6
2249 Male, age 74, both hemispheres 236.8
2113 Female, age 91, right hemisphere 233.2
Hippocampus, CA3
nTPM: 243.5
1867 Male, age 76, both hemispheres 254.8
1891 Female, age 85, both hemispheres 250.0
2137 Male, age 80, left hemisphere 249.2
2861 Female, age 67, both hemispheres 239.2
2436 Male, age 74, both hemispheres 236.0
2620 Female, age 94, left hemisphere 231.6
Parahippocampal cortex
nTPM: 251.1
2250 Female, age 67, right hemisphere 265.3
1850 Male, age 80, both hemispheres 262.4
2245 Female, age 91, both hemispheres 260.5
1933 Female, age 85, both hemispheres 255.9
1990 Female, age 91, right hemisphere 251.9
2532 Female, age 72, left hemisphere 248.2
2018 Male, age 76, both hemispheres 247.2
2622 Female, age 67, right hemisphere 243.1
2692 Male, age 74, both hemispheres 240.2
2693 Female, age 94, both hemispheres 236.4
Perirhinal gyrus
nTPM: 257.6
1847 Female, age 91, left hemisphere 267.0
1794 Male, age 80, right hemisphere 264.4
1841 Female, age 85, right hemisphere 257.5
2521 Female, age 94, right hemisphere 254.2
2848 Male, age 76, right hemisphere 244.7
Subiculum
nTPM: 250.3
2438 Female, age 94, left hemisphere 270.6
1977 Female, age 85, both hemispheres 258.4
1901 Male, age 80, both hemispheres 257.7
2619 Male, age 74, both hemispheres 248.4
2042 Male, age 76, both hemispheres 240.4
2729 Female, age 91, right hemisphere 226.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 348.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 348.4
Samples: 197

Max nTPM: 1248.3
Min nTPM: 131.5
Std nTPM: 129.5
Median nTPM: 320.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 1248.3
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 909.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 739.2
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 665.6
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 656.2
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 639.1
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 592.6
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 578.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 569.6
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 561.4
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 560.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 385.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 385.1
FF:10169-103B7 60 years, female 454.1
FF:10153-102I9 76 years, female 316.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 131.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 131.5
Samples: 4

Max nTPM: 172.0
Min nTPM: 96.7
Sample A Female 172.0
Sample B Female 108.1
Sample C Male 149.0
Sample D Male 96.7
Entorhinal cortex
nTPM: 120.4
Samples: 4

Max nTPM: 151.9
Min nTPM: 98.1
Sample A Female 124.6
Sample B Female 151.9
Sample C Male 106.8
Sample D Male 98.1
Subiculum
nTPM: 102.3
Samples: 4

Max nTPM: 140.2
Min nTPM: 86.2
Sample A Female 140.2
Sample B Female 91.7
Sample C Male 91.0
Sample D Male 86.2
Ventral hippocampus
nTPM: 113.4
Samples: 4

Max nTPM: 130.2
Min nTPM: 84.0
Sample A Female 118.6
Sample B Female 84.0
Sample C Male 130.2
Sample D Male 120.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 576.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 576.5
Samples: 4

Max nTPM: 600.1
Min nTPM: 528.4
Sample A Male 581.1
Sample B Male 596.3
Sample C Female 600.1
Sample D Female 528.4
Hippocampal formation
nTPM: 571.0
Samples: 4

Max nTPM: 644.7
Min nTPM: 524.9
Sample A Male 644.7
Sample B Male 524.9
Sample C Female 547.1
Sample D Female 567.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.2
68631911 Antisense, RP_050125_01_C12, Mouse strain C57BL/6J (56 days, male) 9.2

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