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CDKN2B
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TISSUE PRIMARY DATA SMALL INTESTINE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Small intestine
Tissue proteome
Intestine
SMALL INTESTINE - Expression summary
Protein expression
Small intestinei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glandular cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:30.9 nTPM
HPA:30.9 nTPM
GTEx:19.8 nTPM
FANTOM5:95.9 Scaled Tags Per Million

SMALL INTESTINE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA063327Antibody CAB000349
Glandular cells HighHigh




SMALL INTESTINE - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Read more
Average nTPM 30.9
overview
Male, age 65
Small intestine sample 232
nTPM: 38.9
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40

overview
Male, age 39
Small intestine sample 233
nTPM: 41.1
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55

overview
Male, age 68
Small intestine sample 234
nTPM: 19.2
Cell types%
Glandular cells:
30

Smooth muscle cells:
15

Other cell types:
55

N/A
Male, age 85
Small intestine sample 235
nTPM: 24.2

SMALL INTESTINE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 19.8
GTEx sample id Sample description nTPM
Small Intestine - Terminal Ileum
Average nTPM: 19.8
Samples: 187

Max nTPM: 104.2
Min nTPM: 0.6
Std nTPM: 21.9
Median nTPM: 9.6
GTEX-14PJ6-1726-SM-6AJBN 60-69 years, female 104.2
GTEX-111YS-1426-SM-5GID8 60-69 years, male 96.3
GTEX-1J8Q3-2526-SM-CNNQ4 60-69 years, male 87.4
GTEX-ZDTT-1726-SM-5HL69 60-69 years, male 73.4
GTEX-ZPCL-1726-SM-57WEO 60-69 years, female 67.2
GTEX-14DAR-1426-SM-5RQIR 50-59 years, male 64.9
GTEX-YB5E-1526-SM-5IFIE 40-49 years, male 62.6
GTEX-Y9LG-1626-SM-5IFHM 30-39 years, male 60.5
GTEX-13PL7-2626-SM-5IFH4 60-69 years, female 60.2
GTEX-13D11-0726-SM-5LZZB 50-59 years, female 60.0
GTEX-WY7C-1826-SM-4ONCE 50-59 years, male 59.7
GTEX-YFCO-1326-SM-664NV 40-49 years, male 59.0
GTEX-ZVZP-1826-SM-5GZXB 50-59 years, male 58.7
GTEX-1122O-1326-SM-5H11F 60-69 years, female 57.3
GTEX-YF7O-1826-SM-5IFIU 50-59 years, male 56.9
GTEX-14PN3-2026-SM-68729 60-69 years, female 56.7
GTEX-15G1A-1726-SM-6LPI4 30-39 years, male 56.6
GTEX-ZLV1-1126-SM-4WWBW 60-69 years, female 54.8
GTEX-ZTSS-0926-SM-59865 40-49 years, male 54.4
GTEX-1B8KE-1726-SM-7IGMN 50-59 years, male 53.8
GTEX-ZLWG-1626-SM-DNZZ1 50-59 years, female 53.8
GTEX-YEC4-1726-SM-4W21E 40-49 years, male 52.7
GTEX-1AMFI-1926-SM-731F2 50-59 years, female 52.5
GTEX-ZXES-1526-SM-5NQ95 30-39 years, female 51.0
GTEX-11DXX-1626-SM-5H11H 60-69 years, female 50.4
GTEX-16MTA-1526-SM-6LPJB 50-59 years, male 48.6
GTEX-1399S-2026-SM-5KM4B 30-39 years, female 48.3
GTEX-145LT-1026-SM-5LU9O 40-49 years, male 47.0
GTEX-11P7K-1626-SM-5GU63 30-39 years, male 46.3
GTEX-X5EB-1626-SM-4E3IV 40-49 years, male 45.5
GTEX-11EQ9-1326-SM-5985X 30-39 years, male 45.0
GTEX-144GM-1026-SM-79OKU 20-29 years, male 44.9
GTEX-ZTX8-0526-SM-59HLD 20-29 years, male 44.2
GTEX-XUZC-1426-SM-4BRV3 30-39 years, female 43.8
GTEX-1QP2A-2426-SM-EXOJA 50-59 years, male 43.7
GTEX-1GMR2-1026-SM-7MKHJ 50-59 years, male 43.1
GTEX-XXEK-1026-SM-4BRUW 50-59 years, male 42.1
GTEX-11DXZ-1326-SM-5H11X 50-59 years, male 41.9
GTEX-13FTW-2026-SM-5IJE2 40-49 years, male 41.3
GTEX-1R7EU-1326-SM-E6CQ6 60-69 years, male 40.1
GTEX-14PJN-0826-SM-686ZL 30-39 years, male 39.5
GTEX-ZA64-1226-SM-5HL7B 20-29 years, male 37.0
GTEX-ZG7Y-1926-SM-DNZZ5 50-59 years, male 36.5
GTEX-ZZ64-0526-SM-5GZXM 20-29 years, male 36.4
GTEX-11I78-1126-SM-5A5K5 50-59 years, female 36.3
GTEX-ZYFG-2026-SM-5E43Y 60-69 years, female 34.9
GTEX-13113-1226-SM-5EGHT 60-69 years, female 33.5
GTEX-14PKU-1626-SM-6871C 40-49 years, female 33.0
GTEX-131XF-1326-SM-5GCMQ 60-69 years, male 32.4
GTEX-ZF29-1626-SM-4WKFJ 60-69 years, female 31.8
GTEX-WQUQ-2426-SM-4MVNW 60-69 years, male 30.8
GTEX-1CAMR-0826-SM-7MKFK 20-29 years, male 30.6
GTEX-WHSB-1026-SM-4M1XN 50-59 years, male 30.0
GTEX-13CF3-1226-SM-5LZXN 60-69 years, female 28.6
GTEX-16AAH-1426-SM-7KFTR 50-59 years, male 28.3
GTEX-XBED-1426-SM-4AT4G 60-69 years, male 26.3
GTEX-14XAO-1926-SM-6ETZO 60-69 years, female 25.3
GTEX-ZTPG-2626-SM-57WFX 20-29 years, female 25.2
GTEX-139T6-1026-SM-5IJGC 50-59 years, male 24.8
GTEX-XGQ4-1326-SM-4GIDU 50-59 years, male 24.2
GTEX-14E6E-1626-SM-5RQI7 30-39 years, male 24.1
GTEX-139YR-2226-SM-5IFFW 50-59 years, male 23.6
GTEX-ZVT2-2126-SM-5NQ93 50-59 years, female 23.1
GTEX-Y114-1426-SM-4TT6W 50-59 years, female 23.0
GTEX-13W3W-2026-SM-5K7UL 60-69 years, female 21.6
GTEX-14PK6-1626-SM-6871I 70-79 years, female 20.7
GTEX-ZLFU-1526-SM-4WWBT 40-49 years, male 20.4
GTEX-ZPIC-2326-SM-57WDW 40-49 years, female 20.1
GTEX-1C475-1426-SM-793CH 40-49 years, female 20.0
GTEX-14PJ3-1326-SM-664O7 50-59 years, male 19.9
GTEX-1399R-2026-SM-5K7WN 30-39 years, male 19.7
GTEX-13X6H-1826-SM-7EWCZ 50-59 years, female 19.6
GTEX-1J8QM-1026-SM-C1YQA 60-69 years, female 18.3
GTEX-13FH7-1226-SM-5IJFK 50-59 years, female 18.0
GTEX-133LE-1426-SM-5IFH1 20-29 years, female 17.8
GTEX-1JN76-1126-SM-C1YRL 20-29 years, female 17.4
GTEX-12BJ1-1926-SM-5HL9Z 60-69 years, male 17.2
GTEX-ZVP2-1726-SM-5GU5P 50-59 years, male 16.9
GTEX-11XUK-1426-SM-5EQMG 40-49 years, female 16.7
GTEX-14PKV-2026-SM-6AJ9A 20-29 years, female 15.7
GTEX-1QPFJ-2626-SM-DPRZU 30-39 years, female 15.7
GTEX-XAJ8-0526-SM-47JYK 40-49 years, male 14.4
GTEX-WFG7-1726-SM-4LVME 20-29 years, male 13.3
GTEX-1KXAM-2026-SM-DHXKI 60-69 years, male 12.8
GTEX-ZEX8-1826-SM-57WBH 50-59 years, male 12.5
GTEX-11P82-0826-SM-5P9GU 20-29 years, male 12.1
GTEX-13O21-1026-SM-5IJDU 50-59 years, male 11.7
GTEX-13RTK-0826-SM-5Q5C6 20-29 years, male 11.7
GTEX-WFJO-0926-SM-4LVM2 30-39 years, male 11.7
GTEX-13O61-1326-SM-5KM31 60-69 years, male 9.9
GTEX-1L5NE-1826-SM-EV79T 50-59 years, male 9.9
GTEX-Z9EW-0926-SM-5CVMM 40-49 years, male 9.7
GTEX-11NSD-1726-SM-5N9C3 20-29 years, male 9.6
GTEX-1HSMQ-2226-SM-C1YRD 50-59 years, male 9.6
GTEX-1JMQK-2426-SM-CXZJU 60-69 years, male 9.4
GTEX-VJYA-0926-SM-4KL1N 60-69 years, male 9.2
GTEX-WH7G-1626-SM-4LVMY 40-49 years, male 8.8
GTEX-Y3IK-1726-SM-4YCCR 50-59 years, female 8.3
GTEX-WFG8-1626-SM-4LVMB 20-29 years, male 7.4
GTEX-1399U-2126-SM-5IFEZ 50-59 years, female 7.0
GTEX-13OVI-1926-SM-5IJCG 60-69 years, female 7.0
GTEX-1PDJ9-1826-SM-E9U66 20-29 years, male 6.8
GTEX-11VI4-1626-SM-5EQKO 40-49 years, female 6.7
GTEX-1R9K4-2326-SM-E6CRB 60-69 years, male 6.6
GTEX-111CU-1326-SM-5NQ8L 50-59 years, male 6.1
GTEX-16NGA-1126-SM-7KFSY 40-49 years, female 6.1
GTEX-17HHE-1726-SM-79OKT 50-59 years, male 6.1
GTEX-15EU6-1826-SM-7PC1W 50-59 years, male 5.5
GTEX-12WSK-1526-SM-5CVNO 40-49 years, female 5.4
GTEX-145ME-0926-SM-5O9AR 40-49 years, female 5.1
GTEX-1JK1U-1226-SM-CNNPN 60-69 years, male 4.7
GTEX-18A66-2526-SM-7KFTZ 60-69 years, male 4.5
GTEX-1B8KZ-1126-SM-7IGLX 50-59 years, male 4.4
GTEX-1GL5R-2026-SM-7MKHP 50-59 years, male 4.4
GTEX-ZQUD-0926-SM-57WE3 30-39 years, male 4.4
GTEX-1CAMS-2426-SM-7DHMV 40-49 years, female 4.3
GTEX-WRHK-1026-SM-4MVOD 20-29 years, female 4.3
GTEX-Y5LM-1626-SM-4VDTB 40-49 years, female 4.3
GTEX-1MUQO-2426-SM-EAZ5A 60-69 years, male 4.2
GTEX-1C64O-2526-SM-79ONO 60-69 years, male 4.1
GTEX-1MGNQ-2326-SM-EV7BG 40-49 years, male 4.0
GTEX-1QW4Y-1226-SM-EWRMY 30-39 years, male 4.0
GTEX-117YX-0326-SM-5GICL 50-59 years, male 3.8
GTEX-1192X-2526-SM-59868 50-59 years, male 3.8
GTEX-X15G-1426-SM-4PQZK 50-59 years, female 3.8
GTEX-ZQG8-2526-SM-57WEQ 60-69 years, female 3.8
GTEX-1R7EV-1226-SM-DTX82 40-49 years, male 3.6
GTEX-1497J-1926-SM-5TDCC 60-69 years, male 3.5
GTEX-17KNJ-1626-SM-718AL 50-59 years, male 3.5
GTEX-WFON-1526-SM-4LVMP 40-49 years, male 3.4
GTEX-1R9PM-1626-SM-DPRY9 20-29 years, male 3.3
GTEX-1K9T9-2726-SM-D4P3E 50-59 years, female 3.2
GTEX-ZF2S-1726-SM-57WFT 50-59 years, female 3.1
GTEX-ZP4G-1626-SM-57WGD 20-29 years, female 3.1
GTEX-Y5V5-1826-SM-4VDS5 60-69 years, female 2.9
GTEX-1I1GT-1826-SM-ARZLW 60-69 years, female 2.9
GTEX-1QCLZ-2126-SM-EWRNC 60-69 years, female 2.9
GTEX-1BAJH-2526-SM-7IGOT 70-79 years, male 2.8
GTEX-131XG-1726-SM-5LZUR 50-59 years, female 2.7
GTEX-14BMU-1426-SM-5TDE5 20-29 years, female 2.7
GTEX-13111-1426-SM-5DUW3 50-59 years, male 2.6
GTEX-13QBU-1926-SM-5IJEW 40-49 years, female 2.6
GTEX-1RAZR-1826-SM-E6CRE 40-49 years, male 2.6
GTEX-ZAB5-1526-SM-5HL9P 50-59 years, male 2.5
GTEX-Y3I4-1326-SM-4TT8Z 50-59 years, male 2.4
GTEX-1F75I-2526-SM-9WPOZ 40-49 years, male 2.4
GTEX-1JJE9-2226-SM-CXZJM 70-79 years, male 2.3
GTEX-1R9K5-2026-SM-E6CPS 50-59 years, male 2.3
GTEX-1CB4F-1826-SM-7MGXI 60-69 years, male 2.2
GTEX-1EMGI-2826-SM-7IGMR 60-69 years, male 2.0
GTEX-1GMR3-2726-SM-7MKFB 40-49 years, male 2.0
GTEX-148VJ-2226-SM-5NQ9M 70-79 years, male 1.9
GTEX-14C39-1826-SM-5ZZW4 40-49 years, male 1.8
GTEX-1AX8Z-2526-SM-731E3 60-69 years, male 1.8
GTEX-XPVG-1726-SM-4B65W 50-59 years, male 1.8
GTEX-1S5ZA-1326-SM-EV7BB 20-29 years, male 1.8
GTEX-13NYB-1826-SM-5J1N3 40-49 years, male 1.7
GTEX-15DZA-0826-SM-6AJBF 30-39 years, female 1.7
GTEX-18QFQ-1626-SM-72D7H 30-39 years, male 1.7
GTEX-VUSG-1726-SM-4KKZL 50-59 years, male 1.7
GTEX-1RAZA-1826-SM-DTXA2 20-29 years, male 1.7
GTEX-1H11D-2526-SM-9JGGU 40-49 years, male 1.6
GTEX-1LGOU-1426-SM-D3L8N 20-29 years, female 1.6
GTEX-1NSGN-2126-SM-DPRYN 50-59 years, male 1.6
GTEX-17MFQ-1026-SM-7KFSZ 20-29 years, male 1.5
GTEX-WYJK-1526-SM-4ONCW 50-59 years, male 1.5
GTEX-WEY5-1526-SM-4LMJF 40-49 years, female 1.4
GTEX-XMK1-1826-SM-4B66F 40-49 years, male 1.4
GTEX-1OKEX-1126-SM-DTXEB 60-69 years, male 1.4
GTEX-1QP28-1726-SM-E6CRK 50-59 years, female 1.4
GTEX-Y111-2226-SM-4SOJB 50-59 years, male 1.3
GTEX-1IKOE-1926-SM-ARU7V 30-39 years, female 1.3
GTEX-1H1DE-1426-SM-9JGHV 20-29 years, male 1.2
GTEX-1OJC3-1626-SM-E9U65 20-29 years, male 1.2
GTEX-1R9JW-1926-SM-EVR4J 30-39 years, female 1.2
GTEX-ZC5H-2326-SM-4WAYT 40-49 years, female 1.0
GTEX-1LH75-1926-SM-DIPGD 50-59 years, female 1.0
GTEX-1RAZQ-2226-SM-DPRZR 30-39 years, male 1.0
GTEX-1S82Z-1826-SM-E9TIK 30-39 years, female 1.0
GTEX-11LCK-1926-SM-5A5KE 30-39 years, male 0.9
GTEX-183FY-1626-SM-793D8 20-29 years, male 0.9
GTEX-1LBAC-1526-SM-CXZKU 20-29 years, male 0.9
GTEX-1PIEJ-1526-SM-E6CP8 20-29 years, female 0.9
GTEX-131XE-0926-SM-5HL7J 50-59 years, male 0.8
GTEX-11TUW-1926-SM-5BC58 60-69 years, male 0.7
GTEX-16A39-1426-SM-6LLI6 30-39 years, female 0.7
GTEX-UPK5-2026-SM-4JBIM 40-49 years, male 0.6
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SMALL INTESTINE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 95.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Small intestine
Scaled Tags Per Million: 95.9
FF:10024-101D6 15,40,85 years, mixed 95.9

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