HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Medium
Neuronal projections: Not detected
Synapses: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:173.3 nTPM
HPA:173.3 nTPM
GTEx:126.6 nTPM
FANTOM5:920.1 Scaled Tags Per Million
Pig:241.2 nTPM
Mouse:205.1 nTPM
Allen mouse:13.3 Expression energy

HIPPOCAMPUS - Extended tissue profilei , antibody HPA074873
Glial cells High
Neuronal cells Not detected
Neuronal projections Not detected
Synapses Not detected

HIPPOCAMPUS - Antibody stainingi
Antibody HPA074873Antibody CAB010346
Glial cells LowNot detected
Neuronal cells Not detectedMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 173.3
Sample id Sample description nTPM
Hippocampus
nTPM: 173.3
2148 Female, age 91, left hemisphere 205.1
2529 Female, age 94, left hemisphere 201.2
1911 Female, age 85, right hemisphere 179.7
1898 Male, age 80, left hemisphere 170.3
1855 Male, age 76, left hemisphere 149.2
2621 Female, age 67, right hemisphere 134.3
Dentate gyrus
nTPM: 136.6
2528 Male, age 74, both hemispheres 200.6
2246 Female, age 85, both hemispheres 163.6
1927 Female, age 91, both hemispheres 148.9
2010 Male, age 76, both hemispheres 117.8
2530 Female, age 94, left hemisphere 103.0
2531 Female, age 67, both hemispheres 85.9
Entorhinal gyrus
nTPM: 146.1
2117 Female, age 91, right hemisphere 222.7
1938 Female, age 85, left hemisphere 177.6
1787 Male, age 76, left hemisphere 144.1
2764 Male, age 80, right hemisphere 123.5
2686 Male, age 75, right hemisphere 106.4
2613 Female, age 94, left hemisphere 102.0
Hippocampus, CA1
nTPM: 156.7
2527 Male, age 74, both hemispheres 227.3
1873 Female, age 85, both hemispheres 179.3
2082 Female, age 91, right hemisphere 142.7
2749 Male, age 80, left hemisphere 126.7
2045 Male, age 76, both hemispheres 107.7
Hippocampus, CA2
nTPM: 139.9
2113 Female, age 91, right hemisphere 175.1
2249 Male, age 74, both hemispheres 174.0
1963 Male, age 80, left hemisphere 141.0
1940 Female, age 85, left hemisphere 133.7
2437 Female, age 94, left hemisphere 114.6
1892 Male, age 76, both hemispheres 100.8
Hippocampus, CA3
nTPM: 140.5
1891 Female, age 85, both hemispheres 172.8
2436 Male, age 74, both hemispheres 164.2
2620 Female, age 94, left hemisphere 134.8
2861 Female, age 67, both hemispheres 132.8
2137 Male, age 80, left hemisphere 129.2
1867 Male, age 76, both hemispheres 108.9
Parahippocampal cortex
nTPM: 153.2
2692 Male, age 74, both hemispheres 204.2
2250 Female, age 67, right hemisphere 189.9
2622 Female, age 67, right hemisphere 178.3
1933 Female, age 85, both hemispheres 168.1
1850 Male, age 80, both hemispheres 155.8
1990 Female, age 91, right hemisphere 151.4
2245 Female, age 91, both hemispheres 145.8
2693 Female, age 94, both hemispheres 136.3
2532 Female, age 72, left hemisphere 107.1
2018 Male, age 76, both hemispheres 95.6
Perirhinal gyrus
nTPM: 150.4
1794 Male, age 80, right hemisphere 164.3
1841 Female, age 85, right hemisphere 161.1
1847 Female, age 91, left hemisphere 159.7
2521 Female, age 94, right hemisphere 149.9
2848 Male, age 76, right hemisphere 116.9
Subiculum
nTPM: 162.4
2729 Female, age 91, right hemisphere 241.1
2619 Male, age 74, both hemispheres 227.7
1977 Female, age 85, both hemispheres 140.9
2438 Female, age 94, left hemisphere 139.1
1901 Male, age 80, both hemispheres 120.3
2042 Male, age 76, both hemispheres 105.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 126.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 126.6
Samples: 197

Max nTPM: 359.9
Min nTPM: 25.8
Std nTPM: 66.2
Median nTPM: 110.5
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 359.9
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 344.3
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 320.1
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 311.1
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 307.7
GTEX-ZDXO-0011-R1a-SM-4WKF4 60-69 years, male 303.0
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 300.7
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 297.9
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 264.3
GTEX-QVJO-0011-R1A-SM-2S1QI 60-69 years, female 256.8
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 255.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 920.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 920.1
FF:10153-102I9 76 years, female 1100.5
FF:10169-103B7 60 years, female 739.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 241.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 167.5
Samples: 4

Max nTPM: 207.0
Min nTPM: 119.7
Sample A Female 169.8
Sample B Female 173.6
Sample C Male 207.0
Sample D Male 119.7
Entorhinal cortex
nTPM: 221.6
Samples: 4

Max nTPM: 252.7
Min nTPM: 195.0
Sample A Female 209.9
Sample B Female 228.9
Sample C Male 252.7
Sample D Male 195.0
Subiculum
nTPM: 241.2
Samples: 4

Max nTPM: 268.7
Min nTPM: 205.8
Sample A Female 267.6
Sample B Female 268.7
Sample C Male 222.6
Sample D Male 205.8
Ventral hippocampus
nTPM: 198.3
Samples: 4

Max nTPM: 241.8
Min nTPM: 165.6
Sample A Female 174.9
Sample B Female 210.8
Sample C Male 241.8
Sample D Male 165.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 205.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 205.1
Samples: 4

Max nTPM: 242.2
Min nTPM: 177.2
Sample A Male 199.0
Sample B Male 177.2
Sample C Female 202.0
Sample D Female 242.2
Hippocampal formation
nTPM: 159.2
Samples: 4

Max nTPM: 172.7
Min nTPM: 146.8
Sample A Male 163.1
Sample B Male 146.8
Sample C Female 154.1
Sample D Female 172.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 13.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 13.3
79360318 Antisense, RP_071018_02_A09, Mouse strain C57BL/6J (56 days, male) 17.1
747 Antisense, RP_Baylor_253946, Mouse strain C57BL/6J (56 days, male) 9.5
746 Antisense, RP_Baylor_253946, Mouse strain C57BL/6J (56 days, male) 6.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
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