HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:12.1 nTPM
HPA:12.1 nTPM
GTEx:14.7 nTPM
FANTOM5:53.3 Scaled Tags Per Million
Pig:25.7 nTPM
Mouse:79.4 nTPM
Allen mouse:5.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA004171
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 12.1
Sample id Sample description nTPM
Hippocampus
nTPM: 11.5
1855 Male, age 76, left hemisphere 13.5
1898 Male, age 80, left hemisphere 13.4
2529 Female, age 94, left hemisphere 11.1
2621 Female, age 67, right hemisphere 11.0
2148 Female, age 91, left hemisphere 10.8
1911 Female, age 85, right hemisphere 9.2
Dentate gyrus
nTPM: 11.8
2010 Male, age 76, both hemispheres 13.7
1927 Female, age 91, both hemispheres 12.6
2530 Female, age 94, left hemisphere 12.1
2531 Female, age 67, both hemispheres 11.4
2246 Female, age 85, both hemispheres 10.7
2528 Male, age 74, both hemispheres 10.4
Entorhinal gyrus
nTPM: 10.9
2613 Female, age 94, left hemisphere 11.4
2117 Female, age 91, right hemisphere 11.1
2686 Male, age 75, right hemisphere 11.1
2764 Male, age 80, right hemisphere 10.9
1787 Male, age 76, left hemisphere 10.5
1938 Female, age 85, left hemisphere 10.5
Hippocampus, CA1
nTPM: 12.1
2749 Male, age 80, left hemisphere 13.4
1873 Female, age 85, both hemispheres 12.1
2045 Male, age 76, both hemispheres 12.1
2527 Male, age 74, both hemispheres 11.5
2082 Female, age 91, right hemisphere 11.2
Hippocampus, CA2
nTPM: 11.4
1892 Male, age 76, both hemispheres 14.4
1963 Male, age 80, left hemisphere 12.3
2249 Male, age 74, both hemispheres 11.8
2437 Female, age 94, left hemisphere 10.6
2113 Female, age 91, right hemisphere 9.9
1940 Female, age 85, left hemisphere 9.4
Hippocampus, CA3
nTPM: 12.0
1867 Male, age 76, both hemispheres 13.8
2436 Male, age 74, both hemispheres 13.5
2137 Male, age 80, left hemisphere 12.6
1891 Female, age 85, both hemispheres 11.6
2620 Female, age 94, left hemisphere 11.1
2861 Female, age 67, both hemispheres 9.6
Parahippocampal cortex
nTPM: 11.0
1850 Male, age 80, both hemispheres 12.3
2693 Female, age 94, both hemispheres 11.9
1990 Female, age 91, right hemisphere 11.5
2018 Male, age 76, both hemispheres 11.3
2692 Male, age 74, both hemispheres 11.2
2532 Female, age 72, left hemisphere 11.0
2245 Female, age 91, both hemispheres 10.9
1933 Female, age 85, both hemispheres 10.6
2250 Female, age 67, right hemisphere 10.4
2622 Female, age 67, right hemisphere 9.3
Perirhinal gyrus
nTPM: 11.4
1794 Male, age 80, right hemisphere 12.2
1841 Female, age 85, right hemisphere 11.6
2521 Female, age 94, right hemisphere 11.2
1847 Female, age 91, left hemisphere 11.1
2848 Male, age 76, right hemisphere 11.0
Subiculum
nTPM: 11.0
1901 Male, age 80, both hemispheres 12.2
2438 Female, age 94, left hemisphere 11.5
1977 Female, age 85, both hemispheres 10.9
2619 Male, age 74, both hemispheres 10.6
2042 Male, age 76, both hemispheres 10.5
2729 Female, age 91, right hemisphere 10.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 14.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 14.7
Samples: 197

Max nTPM: 41.4
Min nTPM: 5.7
Std nTPM: 5.0
Median nTPM: 13.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 41.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 33.2
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 27.1
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 26.1
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 25.7
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 25.6
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 25.6
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 24.9
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 24.8
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 24.3
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 24.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 53.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 53.3
FF:10169-103B7 60 years, female 59.6
FF:10153-102I9 76 years, female 47.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 25.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 25.7
Samples: 4

Max nTPM: 27.6
Min nTPM: 23.2
Sample A Female 25.0
Sample B Female 27.6
Sample C Male 26.9
Sample D Male 23.2
Entorhinal cortex
nTPM: 24.8
Samples: 4

Max nTPM: 28.0
Min nTPM: 22.0
Sample A Female 25.1
Sample B Female 28.0
Sample C Male 22.0
Sample D Male 24.0
Subiculum
nTPM: 25.2
Samples: 4

Max nTPM: 26.7
Min nTPM: 24.0
Sample A Female 26.7
Sample B Female 25.3
Sample C Male 24.8
Sample D Male 24.0
Ventral hippocampus
nTPM: 24.6
Samples: 4

Max nTPM: 25.7
Min nTPM: 22.8
Sample A Female 25.7
Sample B Female 25.3
Sample C Male 22.8
Sample D Male 24.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 79.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 61.0
Samples: 4

Max nTPM: 67.4
Min nTPM: 51.1
Sample A Male 61.4
Sample B Male 67.4
Sample C Female 64.1
Sample D Female 51.1
Hippocampal formation
nTPM: 79.4
Samples: 4

Max nTPM: 86.8
Min nTPM: 67.5
Sample A Male 86.8
Sample B Male 67.5
Sample C Female 86.7
Sample D Female 76.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.8
71764059 Antisense, RP_050921_03_B03, Mouse strain C57BL/6J (56 days, male) 5.8

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