HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:10.4 nTPM
HPA:10.4 nTPM
GTEx:20.1 nTPM
FANTOM5:50.8 Scaled Tags Per Million
Pig:16.9 nTPM
Mouse:7.7 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA014968
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 10.4
Sample id Sample description nTPM
Hippocampus
nTPM: 10.2
1855 Male, age 76, left hemisphere 13.3
2529 Female, age 94, left hemisphere 11.8
1898 Male, age 80, left hemisphere 10.7
1911 Female, age 85, right hemisphere 10.0
2621 Female, age 67, right hemisphere 7.9
2148 Female, age 91, left hemisphere 7.8
Dentate gyrus
nTPM: 9.3
2528 Male, age 74, both hemispheres 10.7
2530 Female, age 94, left hemisphere 10.0
2531 Female, age 67, both hemispheres 9.8
2010 Male, age 76, both hemispheres 9.4
1927 Female, age 91, both hemispheres 8.6
2246 Female, age 85, both hemispheres 7.3
Entorhinal gyrus
nTPM: 9.8
2117 Female, age 91, right hemisphere 11.2
2686 Male, age 75, right hemisphere 10.7
2613 Female, age 94, left hemisphere 10.3
2764 Male, age 80, right hemisphere 9.3
1938 Female, age 85, left hemisphere 8.8
1787 Male, age 76, left hemisphere 8.4
Hippocampus, CA1
nTPM: 9.3
2045 Male, age 76, both hemispheres 13.4
1873 Female, age 85, both hemispheres 10.3
2527 Male, age 74, both hemispheres 8.2
2749 Male, age 80, left hemisphere 8.2
2082 Female, age 91, right hemisphere 6.6
Hippocampus, CA2
nTPM: 9.4
2437 Female, age 94, left hemisphere 12.8
1963 Male, age 80, left hemisphere 9.7
1892 Male, age 76, both hemispheres 9.4
1940 Female, age 85, left hemisphere 8.4
2113 Female, age 91, right hemisphere 8.1
2249 Male, age 74, both hemispheres 7.9
Hippocampus, CA3
nTPM: 7.9
1867 Male, age 76, both hemispheres 9.1
2436 Male, age 74, both hemispheres 8.8
1891 Female, age 85, both hemispheres 8.5
2861 Female, age 67, both hemispheres 8.3
2620 Female, age 94, left hemisphere 7.1
2137 Male, age 80, left hemisphere 5.5
Parahippocampal cortex
nTPM: 8.0
1933 Female, age 85, both hemispheres 9.8
2245 Female, age 91, both hemispheres 9.1
2692 Male, age 74, both hemispheres 8.9
1990 Female, age 91, right hemisphere 8.7
2693 Female, age 94, both hemispheres 8.6
2018 Male, age 76, both hemispheres 8.4
1850 Male, age 80, both hemispheres 7.2
2622 Female, age 67, right hemisphere 6.9
2250 Female, age 67, right hemisphere 6.5
2532 Female, age 72, left hemisphere 6.2
Perirhinal gyrus
nTPM: 6.9
1847 Female, age 91, left hemisphere 9.4
2848 Male, age 76, right hemisphere 8.2
1841 Female, age 85, right hemisphere 6.6
2521 Female, age 94, right hemisphere 5.7
1794 Male, age 80, right hemisphere 4.8
Subiculum
nTPM: 10.4
2438 Female, age 94, left hemisphere 13.7
2619 Male, age 74, both hemispheres 11.5
1901 Male, age 80, both hemispheres 9.7
1977 Female, age 85, both hemispheres 9.5
2042 Male, age 76, both hemispheres 9.2
2729 Female, age 91, right hemisphere 8.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 20.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 20.1
Samples: 197

Max nTPM: 44.4
Min nTPM: 1.4
Std nTPM: 8.5
Median nTPM: 18.9
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 44.4
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 43.1
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 43.0
GTEX-YJ89-0011-R1a-SM-4RGLS 60-69 years, male 42.4
GTEX-ZVZQ-0011-R1a-SM-57WBU 60-69 years, female 41.4
GTEX-1212Z-0011-R1b-SM-5BC72 60-69 years, male 41.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 39.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 39.2
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 38.0
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 36.5
GTEX-1C64N-0011-R1b-SM-7P8Q7 50-59 years, male 34.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 50.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 50.8
FF:10169-103B7 60 years, female 55.4
FF:10153-102I9 76 years, female 46.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 16.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 17.0
Samples: 4

Max nTPM: 21.7
Min nTPM: 10.4
Sample A Female 17.2
Sample B Female 18.5
Sample C Male 10.4
Sample D Male 21.7
Entorhinal cortex
nTPM: 12.3
Samples: 4

Max nTPM: 13.4
Min nTPM: 10.2
Sample A Female 13.4
Sample B Female 10.2
Sample C Male 13.2
Sample D Male 12.4
Subiculum
nTPM: 14.3
Samples: 4

Max nTPM: 18.4
Min nTPM: 11.7
Sample A Female 18.4
Sample B Female 14.4
Sample C Male 12.6
Sample D Male 11.7
Ventral hippocampus
nTPM: 13.2
Samples: 4

Max nTPM: 18.5
Min nTPM: 8.9
Sample A Female 8.9
Sample B Female 14.0
Sample C Male 11.4
Sample D Male 18.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 7.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 7.7
Samples: 4

Max nTPM: 9.0
Min nTPM: 6.7
Sample A Male 6.7
Sample B Male 6.9
Sample C Female 8.0
Sample D Female 9.0
Hippocampal formation
nTPM: 7.5
Samples: 4

Max nTPM: 8.4
Min nTPM: 7.1
Sample A Male 8.4
Sample B Male 7.2
Sample C Female 7.1
Sample D Female 7.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
69671768 Antisense, RP_050428_02_C09, Mouse strain C57BL/6J (56 days, male) 0.1

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