HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:163.4 nTPM
HPA:163.4 nTPM
GTEx:202.3 nTPM
FANTOM5:182.3 Scaled Tags Per Million
Pig:44.6 nTPM
Mouse:105.1 nTPM
Allen mouse:3.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA054026Antibody CAB010823Antibody CAB016728Antibody CAB036009
Glial cells LowMediumHighMedium
Neuronal cells MediumNot detectedNot detectedNot detected







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 163.4
Sample id Sample description nTPM
Hippocampus
nTPM: 149.2
2529 Female, age 94, left hemisphere 183.9
1911 Female, age 85, right hemisphere 154.4
1898 Male, age 80, left hemisphere 149.8
1855 Male, age 76, left hemisphere 147.1
2148 Female, age 91, left hemisphere 133.9
2621 Female, age 67, right hemisphere 126.0
Dentate gyrus
nTPM: 141.0
2528 Male, age 74, both hemispheres 182.7
2010 Male, age 76, both hemispheres 166.8
2530 Female, age 94, left hemisphere 159.1
2246 Female, age 85, both hemispheres 125.2
2531 Female, age 67, both hemispheres 108.0
1927 Female, age 91, both hemispheres 104.4
Entorhinal gyrus
nTPM: 134.5
2117 Female, age 91, right hemisphere 201.5
2764 Male, age 80, right hemisphere 144.3
1787 Male, age 76, left hemisphere 128.2
1938 Female, age 85, left hemisphere 121.0
2613 Female, age 94, left hemisphere 109.9
2686 Male, age 75, right hemisphere 102.0
Hippocampus, CA1
nTPM: 131.8
2082 Female, age 91, right hemisphere 149.0
2527 Male, age 74, both hemispheres 147.9
1873 Female, age 85, both hemispheres 138.4
2045 Male, age 76, both hemispheres 116.3
2749 Male, age 80, left hemisphere 107.6
Hippocampus, CA2
nTPM: 147.2
2249 Male, age 74, both hemispheres 178.3
2113 Female, age 91, right hemisphere 159.5
1963 Male, age 80, left hemisphere 152.7
1940 Female, age 85, left hemisphere 146.3
2437 Female, age 94, left hemisphere 140.2
1892 Male, age 76, both hemispheres 106.2
Hippocampus, CA3
nTPM: 123.7
1891 Female, age 85, both hemispheres 157.5
2436 Male, age 74, both hemispheres 138.0
1867 Male, age 76, both hemispheres 135.0
2137 Male, age 80, left hemisphere 109.8
2620 Female, age 94, left hemisphere 108.8
2861 Female, age 67, both hemispheres 93.4
Parahippocampal cortex
nTPM: 116.6
2018 Male, age 76, both hemispheres 144.3
1990 Female, age 91, right hemisphere 133.4
2692 Male, age 74, both hemispheres 130.1
2532 Female, age 72, left hemisphere 128.9
2245 Female, age 91, both hemispheres 114.4
1933 Female, age 85, both hemispheres 110.0
2250 Female, age 67, right hemisphere 110.0
1850 Male, age 80, both hemispheres 109.0
2693 Female, age 94, both hemispheres 96.5
2622 Female, age 67, right hemisphere 89.2
Perirhinal gyrus
nTPM: 100.9
2521 Female, age 94, right hemisphere 116.6
1794 Male, age 80, right hemisphere 104.7
1847 Female, age 91, left hemisphere 101.4
2848 Male, age 76, right hemisphere 92.9
1841 Female, age 85, right hemisphere 88.8
Subiculum
nTPM: 163.4
2042 Male, age 76, both hemispheres 193.3
2729 Female, age 91, right hemisphere 179.9
1901 Male, age 80, both hemispheres 166.5
2619 Male, age 74, both hemispheres 158.5
1977 Female, age 85, both hemispheres 144.2
2438 Female, age 94, left hemisphere 138.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 202.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 202.3
Samples: 197

Max nTPM: 583.5
Min nTPM: 62.3
Std nTPM: 95.1
Median nTPM: 182.2
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 583.5
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 546.4
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 543.2
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 536.0
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 445.2
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 427.2
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 414.5
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 411.9
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 408.0
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 408.0
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 384.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 182.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 182.3
FF:10153-102I9 76 years, female 240.2
FF:10169-103B7 60 years, female 124.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 44.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 44.6
Samples: 4

Max nTPM: 72.3
Min nTPM: 19.1
Sample A Female 51.4
Sample B Female 35.5
Sample C Male 72.3
Sample D Male 19.1
Entorhinal cortex
nTPM: 23.1
Samples: 4

Max nTPM: 31.5
Min nTPM: 13.4
Sample A Female 31.5
Sample B Female 25.4
Sample C Male 22.1
Sample D Male 13.4
Subiculum
nTPM: 28.2
Samples: 4

Max nTPM: 35.8
Min nTPM: 22.9
Sample A Female 26.8
Sample B Female 22.9
Sample C Male 27.1
Sample D Male 35.8
Ventral hippocampus
nTPM: 40.8
Samples: 4

Max nTPM: 60.7
Min nTPM: 22.2
Sample A Female 36.9
Sample B Female 22.2
Sample C Male 60.7
Sample D Male 43.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 105.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 60.4
Samples: 4

Max nTPM: 71.2
Min nTPM: 44.5
Sample A Male 71.2
Sample B Male 58.2
Sample C Female 67.8
Sample D Female 44.5
Hippocampal formation
nTPM: 105.1
Samples: 4

Max nTPM: 160.6
Min nTPM: 64.2
Sample A Male 64.2
Sample B Male 76.9
Sample C Female 160.6
Sample D Female 118.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.6
72081395 Antisense, RP_051017_01_C01, Mouse strain C57BL/6J (56 days, male) 5.2
68444642 Antisense, RP_050111_02_C03, Mouse strain C57BL/6J (56 days, male) 1.9

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The Human Protein Atlas

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