HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:12.9 nTPM
HPA:12.9 nTPM
GTEx:30.4 nTPM
FANTOM5:21.7 Scaled Tags Per Million
Pig:14.4 nTPM
Mouse:23.0 nTPM
Allen mouse:0.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA044340Antibody HPA059710
Glial cells Not detectedNot detected
Neuronal cells LowNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 12.9
Sample id Sample description nTPM
Hippocampus
nTPM: 12.6
2529 Female, age 94, left hemisphere 13.2
2621 Female, age 67, right hemisphere 13.0
1898 Male, age 80, left hemisphere 12.8
2148 Female, age 91, left hemisphere 12.4
1911 Female, age 85, right hemisphere 12.3
1855 Male, age 76, left hemisphere 12.2
Dentate gyrus
nTPM: 12.8
2531 Female, age 67, both hemispheres 13.4
2530 Female, age 94, left hemisphere 13.2
1927 Female, age 91, both hemispheres 12.7
2010 Male, age 76, both hemispheres 12.5
2246 Female, age 85, both hemispheres 12.5
2528 Male, age 74, both hemispheres 12.5
Entorhinal gyrus
nTPM: 12.7
2764 Male, age 80, right hemisphere 13.1
1938 Female, age 85, left hemisphere 12.7
2117 Female, age 91, right hemisphere 12.7
2613 Female, age 94, left hemisphere 12.7
2686 Male, age 75, right hemisphere 12.6
1787 Male, age 76, left hemisphere 12.5
Hippocampus, CA1
nTPM: 12.6
2749 Male, age 80, left hemisphere 13.6
1873 Female, age 85, both hemispheres 12.6
2527 Male, age 74, both hemispheres 12.5
2082 Female, age 91, right hemisphere 12.4
2045 Male, age 76, both hemispheres 12.0
Hippocampus, CA2
nTPM: 12.6
1892 Male, age 76, both hemispheres 13.5
1963 Male, age 80, left hemisphere 12.6
2437 Female, age 94, left hemisphere 12.6
2113 Female, age 91, right hemisphere 12.5
2249 Male, age 74, both hemispheres 12.4
1940 Female, age 85, left hemisphere 12.0
Hippocampus, CA3
nTPM: 12.8
2137 Male, age 80, left hemisphere 13.2
1867 Male, age 76, both hemispheres 13.1
2620 Female, age 94, left hemisphere 13.0
2436 Male, age 74, both hemispheres 12.7
2861 Female, age 67, both hemispheres 12.5
1891 Female, age 85, both hemispheres 12.2
Parahippocampal cortex
nTPM: 12.9
2245 Female, age 91, both hemispheres 13.7
2622 Female, age 67, right hemisphere 13.5
2532 Female, age 72, left hemisphere 13.4
1850 Male, age 80, both hemispheres 13.1
1933 Female, age 85, both hemispheres 13.0
2018 Male, age 76, both hemispheres 12.8
1990 Female, age 91, right hemisphere 12.6
2250 Female, age 67, right hemisphere 12.4
2692 Male, age 74, both hemispheres 12.4
2693 Female, age 94, both hemispheres 12.2
Perirhinal gyrus
nTPM: 12.9
1794 Male, age 80, right hemisphere 13.2
1841 Female, age 85, right hemisphere 12.9
1847 Female, age 91, left hemisphere 12.9
2521 Female, age 94, right hemisphere 12.8
2848 Male, age 76, right hemisphere 12.8
Subiculum
nTPM: 12.7
2438 Female, age 94, left hemisphere 13.7
2619 Male, age 74, both hemispheres 12.9
1977 Female, age 85, both hemispheres 12.8
1901 Male, age 80, both hemispheres 12.7
2042 Male, age 76, both hemispheres 12.3
2729 Female, age 91, right hemisphere 11.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 30.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 30.4
Samples: 197

Max nTPM: 72.7
Min nTPM: 8.9
Std nTPM: 9.0
Median nTPM: 29.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 72.7
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 54.8
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 54.3
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 53.5
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 51.3
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 50.9
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 49.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 49.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 49.0
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 48.9
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 48.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 21.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 21.7
FF:10169-103B7 60 years, female 21.9
FF:10153-102I9 76 years, female 21.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 14.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 14.4
Samples: 4

Max nTPM: 19.1
Min nTPM: 11.1
Sample A Female 19.1
Sample B Female 14.6
Sample C Male 12.8
Sample D Male 11.1
Entorhinal cortex
nTPM: 11.1
Samples: 4

Max nTPM: 13.3
Min nTPM: 7.3
Sample A Female 12.5
Sample B Female 11.2
Sample C Male 13.3
Sample D Male 7.3
Subiculum
nTPM: 10.2
Samples: 4

Max nTPM: 16.9
Min nTPM: 6.2
Sample A Female 16.9
Sample B Female 7.8
Sample C Male 9.8
Sample D Male 6.2
Ventral hippocampus
nTPM: 12.4
Samples: 4

Max nTPM: 15.0
Min nTPM: 8.0
Sample A Female 15.0
Sample B Female 8.0
Sample C Male 14.6
Sample D Male 12.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 23.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 22.5
Samples: 4

Max nTPM: 25.3
Min nTPM: 17.8
Sample A Male 23.5
Sample B Male 23.3
Sample C Female 25.3
Sample D Female 17.8
Hippocampal formation
nTPM: 23.0
Samples: 4

Max nTPM: 24.4
Min nTPM: 20.3
Sample A Male 23.7
Sample B Male 24.4
Sample C Female 23.7
Sample D Female 20.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
71764583 Antisense, RP_050926_01_D10, Mouse strain C57BL/6J (56 days, male) 0.5

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