HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:539.3 nTPM
HPA:539.3 nTPM
GTEx:809.2 nTPM
FANTOM5:39.8 Scaled Tags Per Million
Pig:396.6 nTPM
Mouse:564.8 nTPM
Allen mouse:17.5 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 539.3
Sample id Sample description nTPM
Hippocampus
nTPM: 539.3
1898 Male, age 80, left hemisphere 549.2
2529 Female, age 94, left hemisphere 548.3
2621 Female, age 67, right hemisphere 543.2
2148 Female, age 91, left hemisphere 537.4
1855 Male, age 76, left hemisphere 530.7
1911 Female, age 85, right hemisphere 526.8
Dentate gyrus
nTPM: 538.0
2530 Female, age 94, left hemisphere 562.9
2531 Female, age 67, both hemispheres 542.5
2010 Male, age 76, both hemispheres 533.6
1927 Female, age 91, both hemispheres 531.9
2246 Female, age 85, both hemispheres 530.2
2528 Male, age 74, both hemispheres 527.2
Entorhinal gyrus
nTPM: 535.6
2686 Male, age 75, right hemisphere 546.3
2764 Male, age 80, right hemisphere 537.2
1787 Male, age 76, left hemisphere 537.1
2117 Female, age 91, right hemisphere 534.9
1938 Female, age 85, left hemisphere 530.0
2613 Female, age 94, left hemisphere 527.8
Hippocampus, CA1
nTPM: 533.9
2749 Male, age 80, left hemisphere 539.1
2082 Female, age 91, right hemisphere 538.9
1873 Female, age 85, both hemispheres 535.1
2045 Male, age 76, both hemispheres 528.3
2527 Male, age 74, both hemispheres 527.9
Hippocampus, CA2
nTPM: 534.6
1963 Male, age 80, left hemisphere 549.4
1892 Male, age 76, both hemispheres 542.4
2437 Female, age 94, left hemisphere 537.4
2113 Female, age 91, right hemisphere 531.1
1940 Female, age 85, left hemisphere 525.4
2249 Male, age 74, both hemispheres 521.7
Hippocampus, CA3
nTPM: 533.3
2861 Female, age 67, both hemispheres 551.8
1867 Male, age 76, both hemispheres 542.4
2137 Male, age 80, left hemisphere 530.8
2620 Female, age 94, left hemisphere 528.4
1891 Female, age 85, both hemispheres 527.0
2436 Male, age 74, both hemispheres 519.6
Parahippocampal cortex
nTPM: 528.9
2018 Male, age 76, both hemispheres 538.4
1850 Male, age 80, both hemispheres 536.4
1933 Female, age 85, both hemispheres 532.9
2245 Female, age 91, both hemispheres 531.1
1990 Female, age 91, right hemisphere 529.7
2250 Female, age 67, right hemisphere 529.3
2622 Female, age 67, right hemisphere 526.5
2532 Female, age 72, left hemisphere 526.4
2692 Male, age 74, both hemispheres 524.3
2693 Female, age 94, both hemispheres 514.3
Perirhinal gyrus
nTPM: 534.6
1847 Female, age 91, left hemisphere 543.4
1794 Male, age 80, right hemisphere 538.1
1841 Female, age 85, right hemisphere 536.1
2521 Female, age 94, right hemisphere 528.6
2848 Male, age 76, right hemisphere 526.6
Subiculum
nTPM: 530.4
1977 Female, age 85, both hemispheres 538.0
2729 Female, age 91, right hemisphere 531.7
2042 Male, age 76, both hemispheres 529.8
1901 Male, age 80, both hemispheres 528.1
2619 Male, age 74, both hemispheres 528.1
2438 Female, age 94, left hemisphere 526.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 809.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 809.2
Samples: 197

Max nTPM: 2117.9
Min nTPM: 521.8
Std nTPM: 207.8
Median nTPM: 760.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 2117.9
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 1531.0
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 1393.6
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 1365.0
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 1358.9
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 1306.7
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 1269.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 1246.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 1206.3
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 1202.6
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 1188.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 39.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 39.8
FF:10169-103B7 60 years, female 49.1
FF:10153-102I9 76 years, female 30.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 396.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 396.6
Samples: 4

Max nTPM: 638.6
Min nTPM: 256.3
Sample A Female 638.6
Sample B Female 279.7
Sample C Male 411.9
Sample D Male 256.3
Entorhinal cortex
nTPM: 358.8
Samples: 4

Max nTPM: 412.0
Min nTPM: 266.9
Sample A Female 412.0
Sample B Female 353.6
Sample C Male 402.8
Sample D Male 266.9
Subiculum
nTPM: 342.2
Samples: 4

Max nTPM: 591.2
Min nTPM: 233.2
Sample A Female 591.2
Sample B Female 233.2
Sample C Male 267.6
Sample D Male 276.9
Ventral hippocampus
nTPM: 352.8
Samples: 4

Max nTPM: 432.5
Min nTPM: 232.1
Sample A Female 432.5
Sample B Female 232.1
Sample C Male 416.3
Sample D Male 330.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 564.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 503.9
Samples: 4

Max nTPM: 569.2
Min nTPM: 462.4
Sample A Male 488.1
Sample B Male 462.4
Sample C Female 569.2
Sample D Female 495.8
Hippocampal formation
nTPM: 564.8
Samples: 4

Max nTPM: 637.4
Min nTPM: 508.8
Sample A Male 637.4
Sample B Male 508.8
Sample C Female 557.0
Sample D Female 556.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 17.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 17.5
69818332 Antisense, RP_050510_04_H05, Mouse strain C57BL/6J (56 days, male) 18.2
81600152 Antisense, RP_080320_03_A06, Mouse strain C57BL/6J (56 days, male) 16.9

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