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RPL7A
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BRAIN AMYGDALA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
Brain proteome
Amygdala
AMYGDALA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:555.5 nTPM
HPA:555.5 nTPM
GTEx:948.9 nTPM
FANTOM5:36.4 Scaled Tags Per Million
Pig:321.3 nTPM
Mouse:538.8 nTPM
Allen mouse:18.3 Expression energy

AMYGDALA - Annotated protein expression
Pending normal tissue analysis

AMYGDALA - HPA Brain RNA-seq
Max nTPM 555.5
Sample id Sample description nTPM
Amygdala
nTPM: 555.5
2695 Female, age 67, right hemisphere 575.0
2514 Male, age 75, right hemisphere 568.1
2517 Female, age 94, left hemisphere 554.7
1987 Female, age 91, left hemisphere 545.9
2814 Male, age 76, right hemisphere 534.0
Basal amygdala
nTPM: 545.8
2827 Female, age 67, right hemisphere 571.9
2609 Male, age 75, right hemisphere 559.9
2110 Male, age 80, left hemisphere 545.5
2685 Female, age 94, left hemisphere 538.1
2243 Female, age 91, right hemisphere 537.0
1955 Male, age 76, both hemispheres 522.6
Central amygdala
nTPM: 548.9
2826 Female, age 94, left hemisphere 597.2
2515 Male, age 75, right hemisphere 563.5
2239 Male, age 80, left hemisphere 535.1
2701 Female, age 91, right hemisphere 526.3
1905 Male, age 76, both hemispheres 522.5
Corticomedial amygdala
nTPM: 543.2
2428 Male, age 75, right hemisphere 564.1
2535 Female, age 67, right hemisphere 555.3
2829 Male, age 80, left hemisphere 546.7
2242 Female, age 91, right hemisphere 546.1
2429 Female, age 94, left hemisphere 527.4
2240 Male, age 76, both hemispheres 519.9
Lateral amygdala
nTPM: 554.0
2830 Female, age 67, right hemisphere 582.5
2534 Female, age 94, left hemisphere 567.6
2516 Male, age 75, right hemisphere 565.4
2256 Male, age 80, left hemisphere 544.4
2255 Female, age 91, right hemisphere 532.9
1883 Male, age 76, both hemispheres 531.6
Stria terminalis, bed nucleus
nTPM: 524.4
1974 Female, age 91, both hemispheres 538.3
2201 Male, age 74, unknown 518.6
2486 Female, age 94, both hemispheres 516.2

AMYGDALA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 948.9
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 948.9
Samples: 152

Max nTPM: 2741.2
Min nTPM: 537.8
Std nTPM: 297.5
Median nTPM: 883.5
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 2741.2
GTEX-14JFF-0011-R4a-SM-5ZZV5 60-69 years, male 2051.5
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 1959.2
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 1831.2
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 1807.0
GTEX-147GR-0011-R4a-SM-5S2V2 60-69 years, male 1741.3
GTEX-11ZU8-0011-R4a-SM-5BC6Y 60-69 years, male 1630.0
GTEX-12WSH-0011-R4a-SM-5GU6K 50-59 years, male 1554.2
GTEX-139T8-0011-R4a-SM-5HL54 60-69 years, male 1517.6
GTEX-1LVAO-0011-R4a-SM-EXURO 60-69 years, male 1394.8
GTEX-14E7W-0011-R4b-SM-62LEA 70-79 years, male 1382.3
GTEX-1H2FU-0011-R4a-SM-CL551 60-69 years, female 1361.0
GTEX-OHPN-0011-R4A-SM-2I5FD 60-69 years, female 1308.6
GTEX-145MI-0011-R4b-SM-5PNZH 60-69 years, female 1297.5
GTEX-183WM-0011-R4a-SM-7LG6S 70-79 years, female 1278.1
GTEX-1H1CY-0011-R4b-SM-CJI3G 60-69 years, female 1229.4
GTEX-1GF9W-0011-R4a-SM-CE6RH 60-69 years, male 1207.4
GTEX-QVUS-0011-R4A-SM-3GAE7 60-69 years, female 1194.0
GTEX-15DDE-0011-R4b-SM-7KULI 50-59 years, female 1177.8
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 1168.7
GTEX-12ZZW-0011-R4a-SM-5DUX9 50-59 years, male 1152.6
GTEX-1JJEA-0011-R4a-SM-EXUTC 60-69 years, male 1150.2
GTEX-1CB4G-0011-R4b-SM-CJI28 60-69 years, male 1121.9
GTEX-1C6WA-0011-R4a-SM-9QEH2 60-69 years, male 1113.6
GTEX-13OVH-0011-R4a-SM-5KM3W 70-79 years, male 1109.2
GTEX-1GZ4I-0011-R4a-SM-9QEI9 50-59 years, male 1106.5
GTEX-1C6VR-0011-R4b-SM-9QEGZ 60-69 years, male 1105.5
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 1091.6
GTEX-13OW6-0011-R4a-SM-5O9DX 50-59 years, male 1059.1
GTEX-17EVP-0011-R4a-SM-79OML 40-49 years, male 1056.3
GTEX-1B8L1-0011-R4a-SM-7EWFJ 60-69 years, male 1051.7
GTEX-15ER7-0011-R4a-SM-6M46S 20-29 years, female 1051.1
GTEX-13NYB-0011-R4b-SM-9QEGJ 40-49 years, male 1049.6
GTEX-1F7RK-0011-R4b-SM-9QEI7 20-29 years, female 1038.8
GTEX-17EVQ-0011-R4b-SM-7LT94 70-79 years, male 1038.5
GTEX-13NYS-0011-R4b-SM-5MR3O 60-69 years, male 1034.4
GTEX-13CZV-0011-R4b-SM-5J2NY 60-69 years, male 1029.6
GTEX-ZE9C-0011-R4a-SM-4WKH6 60-69 years, male 1028.6
GTEX-13O3Q-0011-R4a-SM-5P9H2 50-59 years, male 1025.7
GTEX-1GTWX-0011-R4a-SM-C1YQI 60-69 years, male 1021.4
GTEX-1J1OQ-0011-R4a-SM-D4P2A 40-49 years, female 1019.9
GTEX-ZAB4-0011-R4a-SM-4SOKB 40-49 years, male 1012.7
GTEX-1GMR8-0011-R4a-SM-9OSX1 50-59 years, female 1011.0
GTEX-1J8Q2-0011-R4a-SM-ADEHA 60-69 years, male 1005.7
GTEX-1ICLZ-0011-R4a-SM-CMKHL 60-69 years, male 1005.6
GTEX-NPJ7-0011-R4a-SM-2I3GJ 60-69 years, female 993.3
GTEX-15SHU-0011-R4b-SM-7IGLC 40-49 years, female 983.5
GTEX-1JN6P-0011-R4a-SM-EZ6MS 60-69 years, male 982.0
GTEX-17F97-0011-R4b-SM-7KFS2 50-59 years, male 978.2
GTEX-1E1VI-0011-R4b-SM-9QEHV 50-59 years, male 977.2
GTEX-Y8DK-0011-R4A-SM-EXUR1 60-69 years, male 973.1
GTEX-14PQA-0011-R4b-SM-6AJBU 50-59 years, female 968.6
GTEX-1H1ZS-0011-R4b-SM-CKZO7 70-79 years, male 968.1
GTEX-1IY9M-0011-R4a-SM-C1YQ2 60-69 years, male 964.0
GTEX-18464-0011-R4a-SM-7LG6T 50-59 years, male 959.7
GTEX-13SLX-0011-R4a-SM-5O9BJ 50-59 years, female 950.9
GTEX-NL3H-0011-R4a-SM-2I3GK 60-69 years, male 943.2
GTEX-NPJ8-0011-R4a-SM-2HML3 40-49 years, male 937.8
GTEX-13X6K-0011-R4b-SM-5P9HO 60-69 years, female 934.5
GTEX-1LSVX-0011-R4b-SM-EXURP 60-69 years, male 933.4
GTEX-1N2DW-0011-R4b-SM-EZ6MD 50-59 years, male 931.2
GTEX-13O3O-0011-R4b-SM-5KM3F 60-69 years, female 928.1
GTEX-1F6IF-0011-R4b-SM-CKZNJ 60-69 years, male 926.5
GTEX-13QIC-0011-R4a-SM-5PNX8 60-69 years, female 923.8
GTEX-11TTK-0011-R4a-SM-DNZZU 60-69 years, female 921.3
GTEX-1HBPH-0011-R4a-SM-A96RX 40-49 years, female 918.6
GTEX-1I1GR-0011-R4a-SM-CMKHC 60-69 years, male 917.7
GTEX-12ZZZ-0011-R4b-SM-5DUV7 60-69 years, male 917.1
GTEX-NL4W-0011-R4a-SM-2I5GZ 50-59 years, male 912.8
GTEX-11PRG-0011-R4a-SM-DNZZR 50-59 years, male 911.3
GTEX-13X6J-0011-R4b-SM-5P9K4 50-59 years, male 908.7
GTEX-1F48J-0011-R4b-SM-9OSVX 50-59 years, female 902.3
GTEX-13OVL-0011-R4b-SM-5L3HV 50-59 years, male 897.3
GTEX-1N2EE-0011-R4a-SM-EXOII 60-69 years, male 888.7
GTEX-14DAQ-0011-R4a-SM-5YYAI 60-69 years, female 886.3
GTEX-14PJM-0011-R4a-SM-5YYAS 50-59 years, female 885.0
GTEX-RNOR-0011-R4A-SM-3GAD3 50-59 years, female 882.1
GTEX-12WSA-0011-R4a-SM-57WB7 60-69 years, male 874.8
GTEX-13FLV-0011-R4a-SM-5LZYU 50-59 years, male 873.0
GTEX-1399T-0011-R4b-SM-5DUVX 60-69 years, male 872.6
GTEX-15EO6-0011-R4a-SM-7KUKZ 50-59 years, male 870.8
GTEX-13JVG-0011-R4a-SM-5MR4C 60-69 years, male 870.6
GTEX-1H1DG-0011-R4a-SM-CE6RQ 70-79 years, male 864.2
GTEX-1EMGI-0011-R4b-SM-CJI2D 60-69 years, male 855.1
GTEX-QVJO-0011-R4A-SM-2S1QL 60-69 years, female 854.5
GTEX-N7MS-0011-R4a-SM-2HMKW 60-69 years, male 853.0
GTEX-1313W-0011-R4b-SM-5KLZV 50-59 years, female 850.2
GTEX-13112-0011-R4b-SM-5DUXL 50-59 years, male 849.4
GTEX-ZVZQ-0011-R4b-SM-57WCZ 60-69 years, female 844.6
GTEX-12WSF-0011-R4b-SM-5HL88 70-79 years, male 843.1
GTEX-1GN73-0011-R4b-SM-9QEIK 60-69 years, male 841.0
GTEX-1EX96-0011-R4a-SM-ARU82 50-59 years, male 840.5
GTEX-1HBPI-0011-R4a-SM-CJI3K 50-59 years, male 833.5
GTEX-WVLH-0011-R4A-SM-3MJFS 50-59 years, male 832.4
GTEX-1CB4J-0011-R4b-SM-9WG5P 60-69 years, male 830.2
GTEX-13X6I-0011-R4b-SM-5PNU9 60-69 years, male 827.0
GTEX-145LS-0011-R4b-SM-5S2UT 60-69 years, female 826.5
GTEX-N7MT-0011-R4a-SM-2I3G9 60-69 years, female 820.7
GTEX-T5JC-0011-R4A-SM-32PLT 20-29 years, male 820.1
GTEX-1H23P-0011-R4b-SM-CL54R 60-69 years, male 819.5
GTEX-1H3NZ-0011-R4a-SM-CL54T 60-69 years, male 808.8
GTEX-11ONC-0011-R4b-SM-DO93H 60-69 years, male 804.9
GTEX-12WSD-0011-R4b-SM-5LZUA 60-69 years, female 801.8
GTEX-13OW7-0011-R4b-SM-5O9CX 50-59 years, male 791.7
GTEX-WHSE-0011-R4A-SM-3P5ZN 20-29 years, male 789.2
GTEX-X585-0011-R4B-SM-46MVH 50-59 years, male 787.6
GTEX-14BIM-0011-R4b-SM-5S2RK 60-69 years, female 787.5
GTEX-1A3MX-0011-R4b-SM-7EWFK 60-69 years, male 786.3
GTEX-13N1W-0011-R4a-SM-5MR52 70-79 years, male 782.2
GTEX-P44H-0011-R4A-SM-2XCEW 40-49 years, male 770.8
GTEX-ZAK1-0011-R4a-SM-6AJBK 50-59 years, female 768.3
GTEX-144GL-0011-R4a-SM-5PNUI 50-59 years, male 766.0
GTEX-13SLW-0011-R4b-SM-5S2W2 70-79 years, male 758.2
GTEX-1445S-0011-R4a-SM-5PNWN 60-69 years, male 757.7
GTEX-13OW8-0011-R4a-SM-9WG6V 60-69 years, male 755.4
GTEX-14PN4-0011-R4a-SM-686ZT 50-59 years, male 754.6
GTEX-1HFI6-0011-R4b-SM-A96RT 40-49 years, male 750.9
GTEX-Q2AG-0011-R4A-SM-2HMKA 40-49 years, female 746.0
GTEX-TSE9-0011-R4A-SM-3DB7H 60-69 years, female 745.9
GTEX-1J8EW-0011-R4b-SM-ARU89 60-69 years, female 745.6
GTEX-13VXU-0011-R4b-SM-5O9CI 50-59 years, male 741.9
GTEX-15DYW-0011-R4a-SM-6M46V 60-69 years, female 741.9
GTEX-15CHQ-0011-R4a-SM-686ZX 60-69 years, male 738.4
GTEX-13RTJ-0011-R4b-SM-5PNX1 60-69 years, male 738.1
GTEX-1HB9E-0011-R4b-SM-ARZLS 50-59 years, male 736.2
GTEX-11NUK-0011-R4a-SM-DO12B 50-59 years, male 733.5
GTEX-131XH-0011-R4b-SM-5DUWB 50-59 years, male 733.1
GTEX-UTHO-0011-R4A-SM-3GIJP 60-69 years, male 731.8
GTEX-1AX9I-0011-R4b-SM-7EPIB 60-69 years, male 731.7
GTEX-YFC4-0011-R4a-SM-4RGLQ 40-49 years, female 729.9
GTEX-14ASI-0011-R4a-SM-69LQ4 60-69 years, male 729.0
GTEX-11ZVC-0011-R4a-SM-5BC6Z 50-59 years, female 726.8
GTEX-P44G-0011-R4A-SM-2I3FB 30-39 years, male 726.3
GTEX-R55E-0011-R4A-SM-2TC5H 20-29 years, male 705.3
GTEX-13N2G-0011-R4b-SM-5MR54 60-69 years, male 697.8
GTEX-13OW5-0011-R4b-SM-5L3HS 60-69 years, male 695.0
GTEX-QMR6-0011-R4A-SM-32PKU 50-59 years, male 692.4
GTEX-131YS-0011-R4a-SM-5DUVL 60-69 years, female 691.7
GTEX-QDT8-0011-R4A-SM-32PKM 30-39 years, female 682.7
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 677.2
GTEX-1H3O1-0011-R4b-SM-A9SKE 60-69 years, male 676.2
GTEX-15DCD-0011-R4a-SM-69LPB 70-79 years, female 676.1
GTEX-13PVQ-0011-R4a-SM-5O9CT 50-59 years, male 672.1
GTEX-S7SE-0011-R4A-SM-2XCDB 50-59 years, male 665.3
GTEX-X4EP-0011-R4B-SM-3P627 60-69 years, female 664.0
GTEX-1B996-0011-R4b-SM-9OSVO 60-69 years, male 663.3
GTEX-XLM4-0011-R4B-SM-4AT5C 60-69 years, male 657.3
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 631.5
GTEX-14ABY-0011-R4b-SM-5S2VN 50-59 years, male 621.9
GTEX-13OVJ-0011-R4b-SM-5P9H5 50-59 years, female 615.5
GTEX-X4XX-0011-R4B-SM-46MWL 60-69 years, male 608.4
GTEX-T6MN-0011-R4A-SM-32QPG 50-59 years, male 537.8
Show allShow less

AMYGDALA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 36.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 36.4
FF:10151-102I7 76 years, female 36.4

AMYGDALA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 321.3
Pig sample Sample description nTPM
Amygdala
nTPM: 321.3
Samples: 4

Max nTPM: 507.9
Min nTPM: 201.8
Sample A Female 507.9
Sample B Female 261.0
Sample C Male 314.6
Sample D Male 201.8

AMYGDALA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 538.8
Mouse sample Sample description nTPM
Amygdala
nTPM: 538.8
Samples: 4

Max nTPM: 549.8
Min nTPM: 525.9
Sample A Male 525.9
Sample B Male 549.8
Sample C Female 533.5
Sample D Female 546.0

AMYGDALA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Read more
Max Expression energy 18.3
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 18.3
81600152 Antisense, RP_080320_03_A06, Mouse strain C57BL/6J (56 days, male) 18.6
69818332 Antisense, RP_050510_04_H05, Mouse strain C57BL/6J (56 days, male) 18.0

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