HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:26.9 nTPM
HPA:26.9 nTPM
GTEx:27.9 nTPM
FANTOM5:37.0 Scaled Tags Per Million
Mouse:14.3 nTPM
Allen mouse:1.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA067063
Glial cells High
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 26.9
Sample id Sample description nTPM
Hippocampus
nTPM: 25.6
1911 Female, age 85, right hemisphere 26.9
2621 Female, age 67, right hemisphere 26.8
2529 Female, age 94, left hemisphere 25.9
2148 Female, age 91, left hemisphere 25.8
1855 Male, age 76, left hemisphere 24.2
1898 Male, age 80, left hemisphere 24.0
Dentate gyrus
nTPM: 25.2
2246 Female, age 85, both hemispheres 26.9
2531 Female, age 67, both hemispheres 26.1
2530 Female, age 94, left hemisphere 25.6
1927 Female, age 91, both hemispheres 24.5
2010 Male, age 76, both hemispheres 24.2
2528 Male, age 74, both hemispheres 24.0
Entorhinal gyrus
nTPM: 26.8
2613 Female, age 94, left hemisphere 27.9
2764 Male, age 80, right hemisphere 27.7
2686 Male, age 75, right hemisphere 27.1
1787 Male, age 76, left hemisphere 26.5
1938 Female, age 85, left hemisphere 26.1
2117 Female, age 91, right hemisphere 25.6
Hippocampus, CA1
nTPM: 24.2
2082 Female, age 91, right hemisphere 24.9
1873 Female, age 85, both hemispheres 24.8
2527 Male, age 74, both hemispheres 24.4
2045 Male, age 76, both hemispheres 24.0
2749 Male, age 80, left hemisphere 23.1
Hippocampus, CA2
nTPM: 25.2
1940 Female, age 85, left hemisphere 27.4
2437 Female, age 94, left hemisphere 27.2
2249 Male, age 74, both hemispheres 24.8
1892 Male, age 76, both hemispheres 24.3
1963 Male, age 80, left hemisphere 23.9
2113 Female, age 91, right hemisphere 23.7
Hippocampus, CA3
nTPM: 26.0
2620 Female, age 94, left hemisphere 30.2
1891 Female, age 85, both hemispheres 28.7
2861 Female, age 67, both hemispheres 25.4
1867 Male, age 76, both hemispheres 24.7
2436 Male, age 74, both hemispheres 23.7
2137 Male, age 80, left hemisphere 23.6
Parahippocampal cortex
nTPM: 25.6
2692 Male, age 74, both hemispheres 28.1
2622 Female, age 67, right hemisphere 25.9
2693 Female, age 94, both hemispheres 25.9
2532 Female, age 72, left hemisphere 25.8
1990 Female, age 91, right hemisphere 25.4
1850 Male, age 80, both hemispheres 25.3
2018 Male, age 76, both hemispheres 25.3
1933 Female, age 85, both hemispheres 25.2
2245 Female, age 91, both hemispheres 25.1
2250 Female, age 67, right hemisphere 23.9
Perirhinal gyrus
nTPM: 24.6
2521 Female, age 94, right hemisphere 24.8
2848 Male, age 76, right hemisphere 24.8
1841 Female, age 85, right hemisphere 24.6
1847 Female, age 91, left hemisphere 24.5
1794 Male, age 80, right hemisphere 24.1
Subiculum
nTPM: 26.9
2042 Male, age 76, both hemispheres 28.7
2438 Female, age 94, left hemisphere 28.4
1901 Male, age 80, both hemispheres 27.6
2619 Male, age 74, both hemispheres 26.2
1977 Female, age 85, both hemispheres 25.2
2729 Female, age 91, right hemisphere 25.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 27.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 27.9
Samples: 197

Max nTPM: 54.2
Min nTPM: 17.3
Std nTPM: 6.0
Median nTPM: 27.2
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 54.2
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 50.7
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 47.3
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 44.8
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 43.2
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 42.4
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 42.2
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 41.1
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 41.0
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 40.2
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 40.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 37.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 37.0
FF:10153-102I9 76 years, female 41.7
FF:10169-103B7 60 years, female 32.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 14.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 12.9
Samples: 4

Max nTPM: 13.8
Min nTPM: 12.3
Sample A Male 12.3
Sample B Male 12.7
Sample C Female 13.8
Sample D Female 12.6
Hippocampal formation
nTPM: 14.3
Samples: 4

Max nTPM: 15.2
Min nTPM: 13.5
Sample A Male 15.2
Sample B Male 14.2
Sample C Female 14.4
Sample D Female 13.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.9
67767471 Antisense, RP_040916_02_B11, Mouse strain C57BL/6J (56 days, male) 1.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.