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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.
, antibody HPA036819
Pigment epithelial cells
Not detected
Photoreceptor cells
High
Limiting membrane
Not detected
Outer plexiform layer
Not detected
Inner nuclear layer
Not detected
Inner plexiform layer
Not detected
Ganglion cells
Not detected
Nerve fiber layer
Not detected
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM: 546.7
Min nTPM: 103.8
Std nTPM: 88.9
Median nTPM:
352_1
62 years, male
546.7
172_1
72 years, female
518.5
163_1
78 years, male
481.6
237_1
82 years, male
475.6
335_1
73 years, female
445.9
251_1
78 years, male
444.9
319_1
81 years, male
439.2
177_1
74 years, male
437.9
425_1
59 years, female
425.7
350_1
84 years, female
425.1
229_1
69 years, female
423.6
406_1
79 years, male
422.7
503_1
68 years, male
421.7
246_1
77 years, male
409.5
293_1
68 years, female
409.4
286_1
68 years, female
408.1
394_1
75 years, female
407.6
189_1
76 years, male
402.3
376_1
75 years, female
401.1
526_1
61 years, male
401.1
386_1
76 years, male
400.6
292_1
71 years, male
397.1
468_1
89 years, male
394.7
375_1
74 years, female
393.3
480_1
63 years, male
391.1
355_1
70 years, female
383.9
349_1
83 years, male
383.8
377_1
82 years, female
383.8
316_1
62 years, male
376.4
243_1
75 years, male
373.3
318_1
68 years, male
372.9
347_1
72 years, male
371.1
517_1
88 years, male
362.5
354_1
81 years, female
357.4
499_1
55 years, female
354.7
405_1
91 years, male
352.7
321_1
62 years, female
352.6
6_1
73 years, female
351.2
389_1
86 years, female
343.0
266_1
85 years, male
342.8
322_1
76 years, male
341.7
218_1
71 years, female
339.4
115_1
83 years, male
337.5
353_1
82 years, female
336.2
356_1
87 years, female
333.6
264_1
73 years, female
326.6
320_1
89 years, female
325.2
447_1
81 years, male
325.1
99_1
64 years, male
321.3
404_1
82 years, female
319.8
313_1
79 years, female
318.3
117_1
61 years, male
318.0
254_1
77 years, female
313.2
2_1
77 years, female
313.1
9_1
66 years, female
313.1
379_1
60 years, male
312.7
153_1
70 years, female
312.3
351_1
91 years, male
311.4
217_1
76 years, male
310.1
324_1
76 years, male
302.7
137_1
83 years, male
302.5
291_1
76 years, male
301.8
311_1
78 years, male
297.9
126_1
63 years, male
297.5
348_1
84 years, male
296.4
518_1
75 years, female
294.6
265_1
87 years, male
283.6
415_1
77 years, female
283.3
35_1
74 years, female
271.8
142_1
61 years, female
264.2
317_1
60 years, male
262.6
396_1
62 years, male
258.0
506_1
65 years, male
254.6
414_1
84 years, female
254.2
173_1
67 years, male
254.0
307_1
66 years, female
253.1
295_1
61 years, female
248.7
466_1
57 years, female
246.5
495_1
57 years, female
242.3
384_1
83 years, male
238.1
145_1
84 years, male
234.6
18_1
88 years, male
231.1
43_1
64 years, female
229.2
81_1
67 years, male
227.4
490_1
67 years, female
225.7
42_1
85 years, male
224.5
120_1
70 years, female
222.9
315_1
62 years, female
215.9
452_1
88 years, female
215.6
162_1
79 years, female
215.1
32_1
67 years, male
214.4
288_1
66 years, female
214.0
139_1
64 years, female
210.7
109_1
81 years, female
207.4
413_1
59 years, female
203.6
119_1
70 years, female
198.0
4_1
88 years, female
194.3
17_1
71 years, male
187.4
314_1
67 years, male
185.3
149_1
88 years, male
166.8
41_1
94 years, female
166.2
501_1
88 years, male
160.0
89_1
63 years, male
157.1
308_1
70 years, female
115.6
491_1
89 years, female
103.8
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.