HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:91.3 nTPM
HPA:91.3 nTPM
GTEx:45.5 nTPM
FANTOM5:152.2 Scaled Tags Per Million
Pig:77.9 nTPM
Mouse:150.3 nTPM
Allen mouse:16.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA051783Antibody HPA051785Antibody HPA053973
Glial cells Not detectedNot detectedNot detected
Neuronal cells HighMediumHigh







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 91.3
Sample id Sample description nTPM
Hippocampus
nTPM: 68.0
2148 Female, age 91, left hemisphere 80.3
2529 Female, age 94, left hemisphere 79.4
1898 Male, age 80, left hemisphere 74.9
2621 Female, age 67, right hemisphere 61.1
1911 Female, age 85, right hemisphere 60.0
1855 Male, age 76, left hemisphere 52.1
Dentate gyrus
nTPM: 66.5
2528 Male, age 74, both hemispheres 95.3
1927 Female, age 91, both hemispheres 70.6
2531 Female, age 67, both hemispheres 64.6
2246 Female, age 85, both hemispheres 63.7
2530 Female, age 94, left hemisphere 58.9
2010 Male, age 76, both hemispheres 45.8
Entorhinal gyrus
nTPM: 89.1
2764 Male, age 80, right hemisphere 101.4
1938 Female, age 85, left hemisphere 94.3
2613 Female, age 94, left hemisphere 91.2
1787 Male, age 76, left hemisphere 86.4
2117 Female, age 91, right hemisphere 84.0
2686 Male, age 75, right hemisphere 77.2
Hippocampus, CA1
nTPM: 63.8
2527 Male, age 74, both hemispheres 82.6
2082 Female, age 91, right hemisphere 65.3
1873 Female, age 85, both hemispheres 63.0
2045 Male, age 76, both hemispheres 55.0
2749 Male, age 80, left hemisphere 52.9
Hippocampus, CA2
nTPM: 69.1
2437 Female, age 94, left hemisphere 83.7
1892 Male, age 76, both hemispheres 72.9
2249 Male, age 74, both hemispheres 69.5
2113 Female, age 91, right hemisphere 67.8
1940 Female, age 85, left hemisphere 65.8
1963 Male, age 80, left hemisphere 55.1
Hippocampus, CA3
nTPM: 70.6
2620 Female, age 94, left hemisphere 86.4
2861 Female, age 67, both hemispheres 76.3
1891 Female, age 85, both hemispheres 69.4
1867 Male, age 76, both hemispheres 68.7
2436 Male, age 74, both hemispheres 67.8
2137 Male, age 80, left hemisphere 55.1
Parahippocampal cortex
nTPM: 83.1
1850 Male, age 80, both hemispheres 109.3
1990 Female, age 91, right hemisphere 95.3
2692 Male, age 74, both hemispheres 91.9
2622 Female, age 67, right hemisphere 85.8
1933 Female, age 85, both hemispheres 82.0
2532 Female, age 72, left hemisphere 79.9
2693 Female, age 94, both hemispheres 79.6
2245 Female, age 91, both hemispheres 74.1
2250 Female, age 67, right hemisphere 68.1
2018 Male, age 76, both hemispheres 64.8
Perirhinal gyrus
nTPM: 91.3
1794 Male, age 80, right hemisphere 106.9
1847 Female, age 91, left hemisphere 102.8
1841 Female, age 85, right hemisphere 85.9
2848 Male, age 76, right hemisphere 85.4
2521 Female, age 94, right hemisphere 75.8
Subiculum
nTPM: 77.8
2619 Male, age 74, both hemispheres 93.7
2438 Female, age 94, left hemisphere 92.8
2729 Female, age 91, right hemisphere 81.9
1977 Female, age 85, both hemispheres 76.1
1901 Male, age 80, both hemispheres 71.3
2042 Male, age 76, both hemispheres 51.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 45.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 45.5
Samples: 197

Max nTPM: 115.1
Min nTPM: 10.7
Std nTPM: 20.3
Median nTPM: 40.7
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 115.1
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 106.4
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 101.2
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 100.7
GTEX-ZDXO-0011-R1a-SM-4WKF4 60-69 years, male 92.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 92.8
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 91.4
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 90.8
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 90.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 90.3
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 88.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 152.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 152.2
FF:10153-102I9 76 years, female 178.8
FF:10169-103B7 60 years, female 125.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 77.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 63.5
Samples: 4

Max nTPM: 73.1
Min nTPM: 49.7
Sample A Female 60.4
Sample B Female 73.1
Sample C Male 49.7
Sample D Male 70.6
Entorhinal cortex
nTPM: 77.9
Samples: 4

Max nTPM: 96.8
Min nTPM: 64.4
Sample A Female 96.8
Sample B Female 83.0
Sample C Male 67.4
Sample D Male 64.4
Subiculum
nTPM: 47.0
Samples: 4

Max nTPM: 63.8
Min nTPM: 37.2
Sample A Female 63.8
Sample B Female 43.2
Sample C Male 43.9
Sample D Male 37.2
Ventral hippocampus
nTPM: 51.0
Samples: 4

Max nTPM: 59.6
Min nTPM: 44.3
Sample A Female 44.3
Sample B Female 48.3
Sample C Male 59.6
Sample D Male 51.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 150.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 150.3
Samples: 4

Max nTPM: 178.1
Min nTPM: 124.4
Sample A Male 170.3
Sample B Male 178.1
Sample C Female 128.4
Sample D Female 124.4
Hippocampal formation
nTPM: 103.2
Samples: 4

Max nTPM: 111.9
Min nTPM: 86.5
Sample A Male 111.9
Sample B Male 106.8
Sample C Female 86.5
Sample D Female 107.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 16.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 16.6
190 Antisense, RP_Baylor_253885, Mouse strain C57BL/6J (56 days, male) 16.6
189 Antisense, RP_Baylor_253885, Mouse strain C57BL/6J (56 days, male) 13.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
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