COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Low
Glandular cells: Medium
Peripheral nerve/ganglion: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:80.6 nTPM
HPA:80.6 nTPM
GTEx:72.9 nTPM
FANTOM5:140.9 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA031063
Endothelial cells Low
Glandular cells Medium
Peripheral nerve/ganglion Medium



COLON - HPA RNA-seqi
Average nTPM 80.6
overview
Male, age 54 		Colon sample 67
nTPM: 53
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 51.2
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 62.8
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 59
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 59.8
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 101.7
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 110.4
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 104.4
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 92.8
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 119.8
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 80.1
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 74.8
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 78.2
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 72.9
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 72.9
Samples: 373

Max nTPM: 188.8
Min nTPM: 44.1
Std nTPM: 16.6
Median nTPM: 69.2
GTEX-15RJ7-1726-SM-6PAL3 40-49 years, male 188.8
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 148.0
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 146.7
GTEX-1N2EF-1726-SM-EXUSI 60-69 years, male 143.4
GTEX-1A3MX-2326-SM-718B4 60-69 years, male 117.9
GTEX-1K9T9-2926-SM-E9TKD 50-59 years, female 115.0
GTEX-ZPCL-1626-SM-57WGC 60-69 years, female 111.5
GTEX-1RLM8-1726-SM-E9TKF 50-59 years, male 110.7
GTEX-WY7C-1926-SM-4ONCI 50-59 years, male 109.3
GTEX-15RJE-2226-SM-6M46A 40-49 years, male 108.7
GTEX-1J1OQ-2826-SM-D3L88 40-49 years, female 107.6
Show allShow less
Colon - Transverse
Average nTPM: 66.8
Samples: 406

Max nTPM: 132.7
Min nTPM: 37.8
Std nTPM: 13.5
Median nTPM: 65.5
GTEX-1N2EF-1926-SM-DTX8M 60-69 years, male 132.7
GTEX-ZXES-1626-SM-5NQ7L 30-39 years, female 109.1
GTEX-ZYVF-2826-SM-5GIDK 50-59 years, female 106.0
GTEX-144GM-1226-SM-5LU52 20-29 years, male 102.9
GTEX-1IKOE-2026-SM-AHZ31 30-39 years, female 102.5
GTEX-14PK6-1726-SM-6871J 70-79 years, female 102.3
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 100.6
GTEX-1OKEX-1226-SM-DTXEC 60-69 years, male 100.4
GTEX-WHSB-0926-SM-4M1XJ 50-59 years, male 99.7
GTEX-1NV5F-2226-SM-DTX8O 60-69 years, female 99.6
GTEX-12BJ1-2126-SM-5BC5O 60-69 years, male 99.0
Show allShow less

COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 140.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 140.9
FF:10014-101C5 62,83,84 years, mixed 140.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.