HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:46.1 nTPM
HPA:46.1 nTPM
GTEx:32.8 nTPM
FANTOM5:22.8 Scaled Tags Per Million
Pig:18.0 nTPM
Mouse:19.7 nTPM
Allen mouse:0.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA029198Antibody CAB004441
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 46.1
Sample id Sample description nTPM
Hippocampus
nTPM: 45.2
2529 Female, age 94, left hemisphere 48.6
1855 Male, age 76, left hemisphere 46.8
1898 Male, age 80, left hemisphere 44.9
2621 Female, age 67, right hemisphere 44.4
1911 Female, age 85, right hemisphere 43.6
2148 Female, age 91, left hemisphere 42.7
Dentate gyrus
nTPM: 45.2
2010 Male, age 76, both hemispheres 50.9
2530 Female, age 94, left hemisphere 47.0
2528 Male, age 74, both hemispheres 44.2
2531 Female, age 67, both hemispheres 44.2
2246 Female, age 85, both hemispheres 44.0
1927 Female, age 91, both hemispheres 40.9
Entorhinal gyrus
nTPM: 42.8
1787 Male, age 76, left hemisphere 46.9
2117 Female, age 91, right hemisphere 45.0
2686 Male, age 75, right hemisphere 42.4
2764 Male, age 80, right hemisphere 41.3
1938 Female, age 85, left hemisphere 41.1
2613 Female, age 94, left hemisphere 40.1
Hippocampus, CA1
nTPM: 45.4
2045 Male, age 76, both hemispheres 56.2
2527 Male, age 74, both hemispheres 43.7
2082 Female, age 91, right hemisphere 43.6
1873 Female, age 85, both hemispheres 42.5
2749 Male, age 80, left hemisphere 41.1
Hippocampus, CA2
nTPM: 46.1
1892 Male, age 76, both hemispheres 51.4
2249 Male, age 74, both hemispheres 47.7
2437 Female, age 94, left hemisphere 45.0
2113 Female, age 91, right hemisphere 44.9
1963 Male, age 80, left hemisphere 44.1
1940 Female, age 85, left hemisphere 43.4
Hippocampus, CA3
nTPM: 45.9
1867 Male, age 76, both hemispheres 51.5
2436 Male, age 74, both hemispheres 48.0
2861 Female, age 67, both hemispheres 46.7
2620 Female, age 94, left hemisphere 44.3
2137 Male, age 80, left hemisphere 42.5
1891 Female, age 85, both hemispheres 42.4
Parahippocampal cortex
nTPM: 43.9
2018 Male, age 76, both hemispheres 52.1
2250 Female, age 67, right hemisphere 49.7
2532 Female, age 72, left hemisphere 44.5
1990 Female, age 91, right hemisphere 43.3
2692 Male, age 74, both hemispheres 42.8
2245 Female, age 91, both hemispheres 42.6
2622 Female, age 67, right hemisphere 42.3
1933 Female, age 85, both hemispheres 41.6
1850 Male, age 80, both hemispheres 40.4
2693 Female, age 94, both hemispheres 39.7
Perirhinal gyrus
nTPM: 42.0
2848 Male, age 76, right hemisphere 46.5
2521 Female, age 94, right hemisphere 41.4
1841 Female, age 85, right hemisphere 41.3
1847 Female, age 91, left hemisphere 40.6
1794 Male, age 80, right hemisphere 39.9
Subiculum
nTPM: 44.6
2042 Male, age 76, both hemispheres 52.1
2619 Male, age 74, both hemispheres 45.1
2438 Female, age 94, left hemisphere 43.7
1901 Male, age 80, both hemispheres 43.0
2729 Female, age 91, right hemisphere 42.9
1977 Female, age 85, both hemispheres 41.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 32.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 32.8
Samples: 197

Max nTPM: 590.6
Min nTPM: 4.3
Std nTPM: 59.2
Median nTPM: 15.0
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 590.6
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 342.1
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 221.7
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 207.6
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 206.9
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 204.5
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 171.5
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 157.0
GTEX-11ONC-0011-R1a-SM-57WD4 60-69 years, male 137.1
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 123.3
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 110.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 22.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 22.8
FF:10153-102I9 76 years, female 41.5
FF:10169-103B7 60 years, female 4.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 18.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 15.1
Samples: 4

Max nTPM: 17.7
Min nTPM: 12.2
Sample A Female 17.7
Sample B Female 12.2
Sample C Male 15.4
Sample D Male 15.0
Entorhinal cortex
nTPM: 17.6
Samples: 4

Max nTPM: 24.9
Min nTPM: 13.6
Sample A Female 24.9
Sample B Female 13.9
Sample C Male 17.8
Sample D Male 13.6
Subiculum
nTPM: 17.5
Samples: 4

Max nTPM: 23.0
Min nTPM: 10.0
Sample A Female 20.6
Sample B Female 10.0
Sample C Male 16.4
Sample D Male 23.0
Ventral hippocampus
nTPM: 17.9
Samples: 4

Max nTPM: 25.9
Min nTPM: 11.0
Sample A Female 16.6
Sample B Female 11.0
Sample C Male 25.9
Sample D Male 18.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 19.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 19.7
Samples: 4

Max nTPM: 22.7
Min nTPM: 17.6
Sample A Male 17.6
Sample B Male 17.6
Sample C Female 21.0
Sample D Female 22.7
Hippocampal formation
nTPM: 19.8
Samples: 4

Max nTPM: 27.0
Min nTPM: 14.2
Sample A Male 14.2
Sample B Male 18.1
Sample C Female 19.7
Sample D Female 27.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.4
69873588 Antisense, RP_050512_01_E11, Mouse strain C57BL/6J (56 days, male) 0.4

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