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RPS3
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TISSUE PRIMARY DATA SMALL INTESTINE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Small intestine
Tissue proteome
Intestine
SMALL INTESTINE - Expression summary
Protein expression
Small intestinei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glandular cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:1128.2 nTPM
HPA:942.0 nTPM
GTEx:1128.2 nTPM
FANTOM5:557.8 Scaled Tags Per Million

SMALL INTESTINE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA063339
Glandular cells High



SMALL INTESTINE - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Read more
Average nTPM 942.0
overview
Male, age 65
Small intestine sample 232
nTPM: 1245.3
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40

overview
Male, age 39
Small intestine sample 233
nTPM: 825.4
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55

overview
Male, age 68
Small intestine sample 234
nTPM: 805
Cell types%
Glandular cells:
30

Smooth muscle cells:
15

Other cell types:
55

N/A
Male, age 85
Small intestine sample 235
nTPM: 892.5

SMALL INTESTINE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 1128.2
GTEx sample id Sample description nTPM
Small Intestine - Terminal Ileum
Average nTPM: 1128.2
Samples: 187

Max nTPM: 2277.4
Min nTPM: 620.6
Std nTPM: 310.6
Median nTPM: 1067.3
GTEX-1NSGN-2126-SM-DPRYN 50-59 years, male 2277.4
GTEX-1MGNQ-2326-SM-EV7BG 40-49 years, male 2084.5
GTEX-WRHK-1026-SM-4MVOD 20-29 years, female 2000.1
GTEX-1PIEJ-1526-SM-E6CP8 20-29 years, female 1968.6
GTEX-14PK6-1626-SM-6871I 70-79 years, female 1917.0
GTEX-WH7G-1626-SM-4LVMY 40-49 years, male 1823.9
GTEX-1GL5R-2026-SM-7MKHP 50-59 years, male 1756.2
GTEX-11VI4-1626-SM-5EQKO 40-49 years, female 1743.8
GTEX-16NGA-1126-SM-7KFSY 40-49 years, female 1716.0
GTEX-1RAZQ-2226-SM-DPRZR 30-39 years, male 1702.2
GTEX-16A39-1426-SM-6LLI6 30-39 years, female 1691.2
GTEX-1399U-2126-SM-5IFEZ 50-59 years, female 1669.9
GTEX-1GMR3-2726-SM-7MKFB 40-49 years, male 1662.9
GTEX-183FY-1626-SM-793D8 20-29 years, male 1629.5
GTEX-14XAO-1926-SM-6ETZO 60-69 years, female 1601.2
GTEX-WFJO-0926-SM-4LVM2 30-39 years, male 1592.0
GTEX-11P82-0826-SM-5P9GU 20-29 years, male 1588.4
GTEX-X15G-1426-SM-4PQZK 50-59 years, female 1554.1
GTEX-1RAZA-1826-SM-DTXA2 20-29 years, male 1548.6
GTEX-1IKOE-1926-SM-ARU7V 30-39 years, female 1542.9
GTEX-13O61-1326-SM-5KM31 60-69 years, male 1538.5
GTEX-1QPFJ-2626-SM-DPRZU 30-39 years, female 1528.4
GTEX-1R9K4-2326-SM-E6CRB 60-69 years, male 1522.5
GTEX-1JJE9-2226-SM-CXZJM 70-79 years, male 1519.7
GTEX-11TUW-1926-SM-5BC58 60-69 years, male 1504.7
GTEX-VUSG-1726-SM-4KKZL 50-59 years, male 1499.3
GTEX-1QP28-1726-SM-E6CRK 50-59 years, female 1494.0
GTEX-Y5LM-1626-SM-4VDTB 40-49 years, female 1488.1
GTEX-13FH7-1226-SM-5IJFK 50-59 years, female 1451.0
GTEX-1EMGI-2826-SM-7IGMR 60-69 years, male 1444.7
GTEX-1PDJ9-1826-SM-E9U66 20-29 years, male 1440.4
GTEX-148VJ-2226-SM-5NQ9M 70-79 years, male 1434.8
GTEX-1LGOU-1426-SM-D3L8N 20-29 years, female 1415.8
GTEX-1H11D-2526-SM-9JGGU 40-49 years, male 1407.5
GTEX-1GMR2-1026-SM-7MKHJ 50-59 years, male 1403.4
GTEX-1L5NE-1826-SM-EV79T 50-59 years, male 1402.9
GTEX-1OJC3-1626-SM-E9U65 20-29 years, male 1401.7
GTEX-139T6-1026-SM-5IJGC 50-59 years, male 1397.7
GTEX-ZA64-1226-SM-5HL7B 20-29 years, male 1369.0
GTEX-15DZA-0826-SM-6AJBF 30-39 years, female 1361.0
GTEX-11XUK-1426-SM-5EQMG 40-49 years, female 1347.5
GTEX-14E6E-1626-SM-5RQI7 30-39 years, male 1331.3
GTEX-139YR-2226-SM-5IFFW 50-59 years, male 1329.4
GTEX-VJYA-0926-SM-4KL1N 60-69 years, male 1319.8
GTEX-ZLFU-1526-SM-4WWBT 40-49 years, male 1313.9
GTEX-1F75I-2526-SM-9WPOZ 40-49 years, male 1313.1
GTEX-14BMU-1426-SM-5TDE5 20-29 years, female 1310.0
GTEX-ZVP2-1726-SM-5GU5P 50-59 years, male 1300.1
GTEX-ZF29-1626-SM-4WKFJ 60-69 years, female 1300.0
GTEX-11NSD-1726-SM-5N9C3 20-29 years, male 1294.6
GTEX-Z9EW-0926-SM-5CVMM 40-49 years, male 1291.0
GTEX-17MFQ-1026-SM-7KFSZ 20-29 years, male 1284.8
GTEX-13X6H-1826-SM-7EWCZ 50-59 years, female 1284.4
GTEX-1CB4F-1826-SM-7MGXI 60-69 years, male 1281.4
GTEX-1KXAM-2026-SM-DHXKI 60-69 years, male 1275.5
GTEX-18QFQ-1626-SM-72D7H 30-39 years, male 1275.3
GTEX-ZEX8-1826-SM-57WBH 50-59 years, male 1271.2
GTEX-ZTPG-2626-SM-57WFX 20-29 years, female 1263.0
GTEX-145ME-0926-SM-5O9AR 40-49 years, female 1258.1
GTEX-1H1DE-1426-SM-9JGHV 20-29 years, male 1255.1
GTEX-14PKU-1626-SM-6871C 40-49 years, female 1253.1
GTEX-13CF3-1226-SM-5LZXN 60-69 years, female 1205.0
GTEX-14PKV-2026-SM-6AJ9A 20-29 years, female 1204.3
GTEX-1J8QM-1026-SM-C1YQA 60-69 years, female 1204.3
GTEX-1AX8Z-2526-SM-731E3 60-69 years, male 1200.2
GTEX-13RTK-0826-SM-5Q5C6 20-29 years, male 1197.3
GTEX-1K9T9-2726-SM-D4P3E 50-59 years, female 1190.9
GTEX-ZG7Y-1926-SM-DNZZ5 50-59 years, male 1182.5
GTEX-1RAZR-1826-SM-E6CRE 40-49 years, male 1175.4
GTEX-1JMQK-2426-SM-CXZJU 60-69 years, male 1174.9
GTEX-ZP4G-1626-SM-57WGD 20-29 years, female 1174.4
GTEX-1S5ZA-1326-SM-EV7BB 20-29 years, male 1171.8
GTEX-ZXES-1526-SM-5NQ95 30-39 years, female 1159.2
GTEX-1HSMQ-2226-SM-C1YRD 50-59 years, male 1156.3
GTEX-11DXZ-1326-SM-5H11X 50-59 years, male 1150.6
GTEX-ZYFG-2026-SM-5E43Y 60-69 years, female 1144.3
GTEX-Y5V5-1826-SM-4VDS5 60-69 years, female 1141.5
GTEX-1C475-1426-SM-793CH 40-49 years, female 1137.8
GTEX-11DXX-1626-SM-5H11H 60-69 years, female 1135.1
GTEX-1399R-2026-SM-5K7WN 30-39 years, male 1131.7
GTEX-11I78-1126-SM-5A5K5 50-59 years, female 1129.9
GTEX-UPK5-2026-SM-4JBIM 40-49 years, male 1127.7
GTEX-13QBU-1926-SM-5IJEW 40-49 years, female 1127.5
GTEX-ZLWG-1626-SM-DNZZ1 50-59 years, female 1123.6
GTEX-XGQ4-1326-SM-4GIDU 50-59 years, male 1118.3
GTEX-1B8KZ-1126-SM-7IGLX 50-59 years, male 1116.8
GTEX-ZC5H-2326-SM-4WAYT 40-49 years, female 1111.5
GTEX-1CAMR-0826-SM-7MKFK 20-29 years, male 1107.3
GTEX-13113-1226-SM-5EGHT 60-69 years, female 1106.3
GTEX-1QP2A-2426-SM-EXOJA 50-59 years, male 1104.3
GTEX-WFG8-1626-SM-4LVMB 20-29 years, male 1096.1
GTEX-1JN76-1126-SM-C1YRL 20-29 years, female 1077.7
GTEX-1LBAC-1526-SM-CXZKU 20-29 years, male 1073.1
GTEX-1CAMS-2426-SM-7DHMV 40-49 years, female 1067.3
GTEX-15G1A-1726-SM-6LPI4 30-39 years, male 1057.9
GTEX-Y3IK-1726-SM-4YCCR 50-59 years, female 1055.5
GTEX-1B8KE-1726-SM-7IGMN 50-59 years, male 1055.4
GTEX-12BJ1-1926-SM-5HL9Z 60-69 years, male 1050.6
GTEX-1R9JW-1926-SM-EVR4J 30-39 years, female 1036.4
GTEX-WEY5-1526-SM-4LMJF 40-49 years, female 1028.0
GTEX-ZPIC-2326-SM-57WDW 40-49 years, female 1017.0
GTEX-131XF-1326-SM-5GCMQ 60-69 years, male 1015.5
GTEX-145LT-1026-SM-5LU9O 40-49 years, male 1014.7
GTEX-16AAH-1426-SM-7KFTR 50-59 years, male 1011.3
GTEX-1192X-2526-SM-59868 50-59 years, male 1010.4
GTEX-1R7EV-1226-SM-DTX82 40-49 years, male 1004.5
GTEX-12WSK-1526-SM-5CVNO 40-49 years, female 1000.2
GTEX-14DAR-1426-SM-5RQIR 50-59 years, male 997.6
GTEX-ZTX8-0526-SM-59HLD 20-29 years, male 996.8
GTEX-WHSB-1026-SM-4M1XN 50-59 years, male 995.0
GTEX-1497J-1926-SM-5TDCC 60-69 years, male 994.0
GTEX-11EQ9-1326-SM-5985X 30-39 years, male 993.8
GTEX-WFG7-1726-SM-4LVME 20-29 years, male 989.0
GTEX-X5EB-1626-SM-4E3IV 40-49 years, male 986.8
GTEX-1QW4Y-1226-SM-EWRMY 30-39 years, male 976.4
GTEX-1LH75-1926-SM-DIPGD 50-59 years, female 975.8
GTEX-Y3I4-1326-SM-4TT8Z 50-59 years, male 970.6
GTEX-131XG-1726-SM-5LZUR 50-59 years, female 967.6
GTEX-117YX-0326-SM-5GICL 50-59 years, male 958.8
GTEX-13W3W-2026-SM-5K7UL 60-69 years, female 955.6
GTEX-ZAB5-1526-SM-5HL9P 50-59 years, male 954.2
GTEX-1399S-2026-SM-5KM4B 30-39 years, female 949.0
GTEX-WY7C-1826-SM-4ONCE 50-59 years, male 949.0
GTEX-1OKEX-1126-SM-DTXEB 60-69 years, male 947.4
GTEX-ZZ64-0526-SM-5GZXM 20-29 years, male 944.3
GTEX-1JK1U-1226-SM-CNNPN 60-69 years, male 934.4
GTEX-ZQG8-2526-SM-57WEQ 60-69 years, female 934.2
GTEX-16MTA-1526-SM-6LPJB 50-59 years, male 924.8
GTEX-15EU6-1826-SM-7PC1W 50-59 years, male 924.0
GTEX-XUZC-1426-SM-4BRV3 30-39 years, female 923.0
GTEX-1MUQO-2426-SM-EAZ5A 60-69 years, male 917.4
GTEX-13NYB-1826-SM-5J1N3 40-49 years, male 916.9
GTEX-1R7EU-1326-SM-E6CQ6 60-69 years, male 915.8
GTEX-14PJ3-1326-SM-664O7 50-59 years, male 912.8
GTEX-1BAJH-2526-SM-7IGOT 70-79 years, male 908.9
GTEX-YB5E-1526-SM-5IFIE 40-49 years, male 908.7
GTEX-XBED-1426-SM-4AT4G 60-69 years, male 908.0
GTEX-ZVT2-2126-SM-5NQ93 50-59 years, female 900.7
GTEX-YEC4-1726-SM-4W21E 40-49 years, male 899.4
GTEX-133LE-1426-SM-5IFH1 20-29 years, female 897.2
GTEX-13D11-0726-SM-5LZZB 50-59 years, female 889.4
GTEX-14C39-1826-SM-5ZZW4 40-49 years, male 887.1
GTEX-13111-1426-SM-5DUW3 50-59 years, male 887.0
GTEX-1I1GT-1826-SM-ARZLW 60-69 years, female 882.0
GTEX-1S82Z-1826-SM-E9TIK 30-39 years, female 880.1
GTEX-ZQUD-0926-SM-57WE3 30-39 years, male 876.4
GTEX-XMK1-1826-SM-4B66F 40-49 years, male 875.1
GTEX-14PN3-2026-SM-68729 60-69 years, female 872.8
GTEX-13PL7-2626-SM-5IFH4 60-69 years, female 872.7
GTEX-ZF2S-1726-SM-57WFT 50-59 years, female 869.1
GTEX-17KNJ-1626-SM-718AL 50-59 years, male 861.8
GTEX-11P7K-1626-SM-5GU63 30-39 years, male 861.1
GTEX-1122O-1326-SM-5H11F 60-69 years, female 860.1
GTEX-17HHE-1726-SM-79OKT 50-59 years, male 850.6
GTEX-13FTW-2026-SM-5IJE2 40-49 years, male 840.8
GTEX-XPVG-1726-SM-4B65W 50-59 years, male 840.4
GTEX-14PJ6-1726-SM-6AJBN 60-69 years, female 839.0
GTEX-ZDTT-1726-SM-5HL69 60-69 years, male 836.2
GTEX-ZLV1-1126-SM-4WWBW 60-69 years, female 834.8
GTEX-1R9PM-1626-SM-DPRY9 20-29 years, male 822.5
GTEX-18A66-2526-SM-7KFTZ 60-69 years, male 819.9
GTEX-Y114-1426-SM-4TT6W 50-59 years, female 818.1
GTEX-ZPCL-1726-SM-57WEO 60-69 years, female 810.4
GTEX-WQUQ-2426-SM-4MVNW 60-69 years, male 801.9
GTEX-14PJN-0826-SM-686ZL 30-39 years, male 801.4
GTEX-111CU-1326-SM-5NQ8L 50-59 years, male 796.0
GTEX-131XE-0926-SM-5HL7J 50-59 years, male 790.1
GTEX-Y111-2226-SM-4SOJB 50-59 years, male 782.2
GTEX-XXEK-1026-SM-4BRUW 50-59 years, male 772.7
GTEX-1C64O-2526-SM-79ONO 60-69 years, male 766.6
GTEX-1AMFI-1926-SM-731F2 50-59 years, female 765.1
GTEX-YF7O-1826-SM-5IFIU 50-59 years, male 761.3
GTEX-Y9LG-1626-SM-5IFHM 30-39 years, male 757.2
GTEX-XAJ8-0526-SM-47JYK 40-49 years, male 751.9
GTEX-13O21-1026-SM-5IJDU 50-59 years, male 749.1
GTEX-144GM-1026-SM-79OKU 20-29 years, male 746.5
GTEX-YFCO-1326-SM-664NV 40-49 years, male 740.5
GTEX-ZVZP-1826-SM-5GZXB 50-59 years, male 740.3
GTEX-111YS-1426-SM-5GID8 60-69 years, male 724.3
GTEX-11LCK-1926-SM-5A5KE 30-39 years, male 721.4
GTEX-1R9K5-2026-SM-E6CPS 50-59 years, male 721.3
GTEX-WYJK-1526-SM-4ONCW 50-59 years, male 714.1
GTEX-WFON-1526-SM-4LVMP 40-49 years, male 689.4
GTEX-1QCLZ-2126-SM-EWRNC 60-69 years, female 687.9
GTEX-1J8Q3-2526-SM-CNNQ4 60-69 years, male 664.9
GTEX-13OVI-1926-SM-5IJCG 60-69 years, female 659.4
GTEX-ZTSS-0926-SM-59865 40-49 years, male 620.6
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SMALL INTESTINE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 557.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Small intestine
Scaled Tags Per Million: 557.8
FF:10024-101D6 15,40,85 years, mixed 557.8

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