HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:64.0 nTPM
HPA:64.0 nTPM
GTEx:57.9 nTPM
FANTOM5:34.5 Scaled Tags Per Million
Pig:51.5 nTPM
Mouse:127.0 nTPM
Allen mouse:0.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA051328
Glial cells Not detected
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 64.0
Sample id Sample description nTPM
Hippocampus
nTPM: 62.1
1898 Male, age 80, left hemisphere 67.0
2621 Female, age 67, right hemisphere 65.4
2148 Female, age 91, left hemisphere 61.8
1911 Female, age 85, right hemisphere 59.7
2529 Female, age 94, left hemisphere 59.5
1855 Male, age 76, left hemisphere 58.9
Dentate gyrus
nTPM: 62.2
2530 Female, age 94, left hemisphere 68.9
1927 Female, age 91, both hemispheres 63.9
2528 Male, age 74, both hemispheres 63.0
2010 Male, age 76, both hemispheres 61.2
2246 Female, age 85, both hemispheres 58.3
2531 Female, age 67, both hemispheres 57.9
Entorhinal gyrus
nTPM: 64.0
2613 Female, age 94, left hemisphere 68.4
2764 Male, age 80, right hemisphere 65.0
1938 Female, age 85, left hemisphere 64.8
1787 Male, age 76, left hemisphere 63.6
2117 Female, age 91, right hemisphere 63.2
2686 Male, age 75, right hemisphere 59.0
Hippocampus, CA1
nTPM: 62.8
2749 Male, age 80, left hemisphere 72.5
1873 Female, age 85, both hemispheres 63.7
2527 Male, age 74, both hemispheres 62.4
2082 Female, age 91, right hemisphere 58.2
2045 Male, age 76, both hemispheres 57.4
Hippocampus, CA2
nTPM: 62.3
1963 Male, age 80, left hemisphere 68.4
1892 Male, age 76, both hemispheres 66.7
2437 Female, age 94, left hemisphere 64.7
2249 Male, age 74, both hemispheres 60.4
1940 Female, age 85, left hemisphere 56.8
2113 Female, age 91, right hemisphere 56.8
Hippocampus, CA3
nTPM: 63.2
2620 Female, age 94, left hemisphere 65.0
2137 Male, age 80, left hemisphere 64.9
2436 Male, age 74, both hemispheres 63.7
1867 Male, age 76, both hemispheres 62.7
2861 Female, age 67, both hemispheres 61.6
1891 Female, age 85, both hemispheres 61.4
Parahippocampal cortex
nTPM: 59.9
2692 Male, age 74, both hemispheres 63.3
1990 Female, age 91, right hemisphere 62.4
1933 Female, age 85, both hemispheres 61.9
1850 Male, age 80, both hemispheres 61.3
2245 Female, age 91, both hemispheres 60.9
2250 Female, age 67, right hemisphere 59.2
2532 Female, age 72, left hemisphere 58.6
2018 Male, age 76, both hemispheres 57.4
2622 Female, age 67, right hemisphere 57.4
2693 Female, age 94, both hemispheres 56.3
Perirhinal gyrus
nTPM: 61.0
1847 Female, age 91, left hemisphere 66.1
1794 Male, age 80, right hemisphere 63.1
1841 Female, age 85, right hemisphere 59.0
2521 Female, age 94, right hemisphere 58.8
2848 Male, age 76, right hemisphere 58.1
Subiculum
nTPM: 61.7
1901 Male, age 80, both hemispheres 64.1
1977 Female, age 85, both hemispheres 63.7
2619 Male, age 74, both hemispheres 62.9
2042 Male, age 76, both hemispheres 61.2
2729 Female, age 91, right hemisphere 59.3
2438 Female, age 94, left hemisphere 58.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 57.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 57.9
Samples: 197

Max nTPM: 114.8
Min nTPM: 25.5
Std nTPM: 15.4
Median nTPM: 55.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 114.8
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 113.4
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 101.7
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 93.4
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 93.1
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 90.0
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 88.4
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 88.3
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 87.5
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 86.4
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 85.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 34.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 34.5
FF:10169-103B7 60 years, female 35.5
FF:10153-102I9 76 years, female 33.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 51.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 51.6
Samples: 4

Max nTPM: 65.8
Min nTPM: 40.4
Sample A Female 65.8
Sample B Female 51.3
Sample C Male 48.7
Sample D Male 40.4
Entorhinal cortex
nTPM: 43.7
Samples: 4

Max nTPM: 47.8
Min nTPM: 36.3
Sample A Female 45.0
Sample B Female 45.5
Sample C Male 47.8
Sample D Male 36.3
Subiculum
nTPM: 38.6
Samples: 4

Max nTPM: 49.4
Min nTPM: 34.1
Sample A Female 49.4
Sample B Female 34.1
Sample C Male 35.1
Sample D Male 35.8
Ventral hippocampus
nTPM: 45.1
Samples: 4

Max nTPM: 54.0
Min nTPM: 30.0
Sample A Female 47.4
Sample B Female 30.0
Sample C Male 54.0
Sample D Male 48.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 127.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 120.6
Samples: 4

Max nTPM: 127.0
Min nTPM: 112.1
Sample A Male 126.8
Sample B Male 127.0
Sample C Female 116.5
Sample D Female 112.1
Hippocampal formation
nTPM: 127.0
Samples: 4

Max nTPM: 131.2
Min nTPM: 122.4
Sample A Male 126.7
Sample B Male 122.4
Sample C Female 131.2
Sample D Female 127.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.7
71283674 Antisense, RP_050825_01_C10, Mouse strain C57BL/6J (56 days, male) 0.7

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