COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Not detected
Glandular cells: Low
Peripheral nerve/ganglion: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:31.1 nTPM
HPA:31.1 nTPM
GTEx:22.1 nTPM
FANTOM5:27.8 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA060740
Endothelial cells Not detected
Glandular cells Low
Peripheral nerve/ganglion Low

COLON - HPA RNA-seqi
Average nTPM 31.1
overview
Male, age 54 		Colon sample 67
nTPM: 32.7
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 46.3
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 29.6
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 36.6
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 22.1
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 18.4
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 38.6
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 40.2
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 15.5
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 40.2
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 42.6
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 21.8
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 20.5
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 22.1
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 9.3
Samples: 373

Max nTPM: 53.5
Min nTPM: 0.8
Std nTPM: 9.5
Median nTPM: 5.9
GTEX-1H3VE-2326-SM-9KNVU 40-49 years, male 53.5
GTEX-14C39-1626-SM-5S2P4 40-49 years, male 52.2
GTEX-1R9PO-2026-SM-E9J4N 60-69 years, female 48.7
GTEX-Y5V6-1626-SM-4VDT2 60-69 years, male 47.6
GTEX-15RJE-2226-SM-6M46A 40-49 years, male 42.7
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 42.1
GTEX-13FHO-2726-SM-5K7VG 60-69 years, male 42.0
GTEX-ZQUD-1026-SM-4YCEZ 30-39 years, male 41.2
GTEX-W5WG-2026-SM-4LMIB 50-59 years, female 40.9
GTEX-WHSE-2726-SM-EZ6ML 20-29 years, male 40.7
GTEX-15F5U-1426-SM-7KUN2 40-49 years, male 40.3
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Colon - Transverse
Average nTPM: 22.1
Samples: 406

Max nTPM: 94.8
Min nTPM: 0.9
Std nTPM: 13.1
Median nTPM: 22.1
GTEX-13OVJ-1726-SM-5IJDZ 50-59 years, female 94.8
GTEX-13O3P-2326-SM-5KM55 50-59 years, male 67.7
GTEX-1J1OQ-2726-SM-AHZ3R 40-49 years, female 59.5
GTEX-14E6E-1526-SM-5RQIG 30-39 years, male 59.1
GTEX-144GM-1226-SM-5LU52 20-29 years, male 56.8
GTEX-1JMPY-0426-SM-C1YQ3 30-39 years, male 56.1
GTEX-1PWST-2426-SM-EWRMP 70-79 years, male 55.3
GTEX-16XZZ-2626-SM-6M47S 60-69 years, male 49.5
GTEX-1C475-1626-SM-731FP 40-49 years, female 49.5
GTEX-O5YT-1426-SM-3MJHC 20-29 years, male 48.6
GTEX-14PK6-1726-SM-6871J 70-79 years, female 48.4
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 27.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 27.8
FF:10014-101C5 62,83,84 years, mixed 27.8

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.