HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:20.9 nTPM
HPA:20.9 nTPM
GTEx:16.0 nTPM
FANTOM5:204.5 Scaled Tags Per Million
Pig:84.3 nTPM
Mouse:98.5 nTPM
Allen mouse:12.6 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 20.9
Sample id Sample description nTPM
Hippocampus
nTPM: 13.9
2148 Female, age 91, left hemisphere 23.6
1898 Male, age 80, left hemisphere 18.9
2621 Female, age 67, right hemisphere 17.7
1855 Male, age 76, left hemisphere 8.5
1911 Female, age 85, right hemisphere 8.4
2529 Female, age 94, left hemisphere 6.5
Dentate gyrus
nTPM: 17.6
1927 Female, age 91, both hemispheres 27.6
2531 Female, age 67, both hemispheres 24.7
2530 Female, age 94, left hemisphere 15.8
2528 Male, age 74, both hemispheres 13.9
2246 Female, age 85, both hemispheres 13.5
2010 Male, age 76, both hemispheres 10.1
Entorhinal gyrus
nTPM: 16.7
2613 Female, age 94, left hemisphere 29.2
2764 Male, age 80, right hemisphere 20.3
1938 Female, age 85, left hemisphere 17.5
2686 Male, age 75, right hemisphere 14.1
1787 Male, age 76, left hemisphere 14.0
2117 Female, age 91, right hemisphere 5.0
Hippocampus, CA1
nTPM: 14.4
2749 Male, age 80, left hemisphere 24.1
1873 Female, age 85, both hemispheres 17.5
2045 Male, age 76, both hemispheres 15.2
2527 Male, age 74, both hemispheres 9.6
2082 Female, age 91, right hemisphere 5.8
Hippocampus, CA2
nTPM: 12.9
1892 Male, age 76, both hemispheres 27.7
2437 Female, age 94, left hemisphere 17.7
1963 Male, age 80, left hemisphere 13.8
1940 Female, age 85, left hemisphere 7.3
2113 Female, age 91, right hemisphere 6.2
2249 Male, age 74, both hemispheres 4.6
Hippocampus, CA3
nTPM: 20.9
2620 Female, age 94, left hemisphere 36.0
2861 Female, age 67, both hemispheres 28.9
2137 Male, age 80, left hemisphere 20.9
1867 Male, age 76, both hemispheres 19.8
1891 Female, age 85, both hemispheres 15.3
2436 Male, age 74, both hemispheres 4.6
Parahippocampal cortex
nTPM: 15.4
1990 Female, age 91, right hemisphere 20.9
2622 Female, age 67, right hemisphere 20.9
1850 Male, age 80, both hemispheres 20.3
2693 Female, age 94, both hemispheres 18.0
2245 Female, age 91, both hemispheres 16.0
2692 Male, age 74, both hemispheres 14.1
2250 Female, age 67, right hemisphere 13.7
1933 Female, age 85, both hemispheres 13.5
2532 Female, age 72, left hemisphere 12.7
2018 Male, age 76, both hemispheres 4.3
Perirhinal gyrus
nTPM: 19.3
1847 Female, age 91, left hemisphere 28.2
1794 Male, age 80, right hemisphere 20.5
1841 Female, age 85, right hemisphere 17.5
2521 Female, age 94, right hemisphere 15.3
2848 Male, age 76, right hemisphere 14.9
Subiculum
nTPM: 12.2
1977 Female, age 85, both hemispheres 18.1
2438 Female, age 94, left hemisphere 16.9
1901 Male, age 80, both hemispheres 14.8
2619 Male, age 74, both hemispheres 12.5
2729 Female, age 91, right hemisphere 9.1
2042 Male, age 76, both hemispheres 1.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 16.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 16.0
Samples: 197

Max nTPM: 46.2
Min nTPM: 1.5
Std nTPM: 10.3
Median nTPM: 14.1
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 46.2
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 45.8
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 43.9
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 40.1
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 40.0
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 40.0
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 39.7
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 38.8
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 36.8
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 36.4
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 36.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 204.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 204.5
FF:10169-103B7 60 years, female 292.9
FF:10153-102I9 76 years, female 116.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 84.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 79.9
Samples: 4

Max nTPM: 96.7
Min nTPM: 62.0
Sample A Female 93.4
Sample B Female 96.7
Sample C Male 67.3
Sample D Male 62.0
Entorhinal cortex
nTPM: 84.3
Samples: 4

Max nTPM: 97.5
Min nTPM: 76.8
Sample A Female 97.5
Sample B Female 84.6
Sample C Male 76.8
Sample D Male 78.3
Subiculum
nTPM: 61.7
Samples: 4

Max nTPM: 91.9
Min nTPM: 46.5
Sample A Female 91.9
Sample B Female 49.6
Sample C Male 58.9
Sample D Male 46.5
Ventral hippocampus
nTPM: 79.4
Samples: 4

Max nTPM: 108.4
Min nTPM: 50.9
Sample A Female 74.9
Sample B Female 50.9
Sample C Male 108.4
Sample D Male 83.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 98.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 98.5
Samples: 4

Max nTPM: 119.4
Min nTPM: 88.9
Sample A Male 88.9
Sample B Male 91.4
Sample C Female 94.1
Sample D Female 119.4
Hippocampal formation
nTPM: 97.9
Samples: 4

Max nTPM: 118.5
Min nTPM: 84.7
Sample A Male 84.7
Sample B Male 102.4
Sample C Female 118.5
Sample D Female 85.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 12.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.6
73573157 Antisense, RP_051121_03_D06, Mouse strain C57BL/6J (56 days, male) 14.3
74988751 Antisense, RP_060315_05_G06, Mouse strain C57BL/6J (56 days, male) 12.1
70565945 Antisense, RP_050628_01_G07, Mouse strain C57BL/6J (56 days, male) 11.5

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The Human Protein Atlas

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