HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:62.2 nTPM
HPA:62.2 nTPM
GTEx:43.9 nTPM
FANTOM5:23.1 Scaled Tags Per Million
Mouse:26.5 nTPM

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 62.2
Sample id Sample description nTPM
Hippocampus
nTPM: 58.8
1898 Male, age 80, left hemisphere 62.3
2621 Female, age 67, right hemisphere 58.7
2529 Female, age 94, left hemisphere 58.6
1855 Male, age 76, left hemisphere 58.2
2148 Female, age 91, left hemisphere 57.9
1911 Female, age 85, right hemisphere 57.1
Dentate gyrus
nTPM: 58.5
1927 Female, age 91, both hemispheres 60.3
2530 Female, age 94, left hemisphere 59.0
2010 Male, age 76, both hemispheres 58.8
2531 Female, age 67, both hemispheres 58.3
2246 Female, age 85, both hemispheres 57.6
2528 Male, age 74, both hemispheres 57.1
Entorhinal gyrus
nTPM: 59.9
2764 Male, age 80, right hemisphere 62.3
1787 Male, age 76, left hemisphere 60.4
2613 Female, age 94, left hemisphere 60.4
1938 Female, age 85, left hemisphere 60.2
2686 Male, age 75, right hemisphere 58.2
2117 Female, age 91, right hemisphere 58.1
Hippocampus, CA1
nTPM: 59.3
2749 Male, age 80, left hemisphere 62.4
1873 Female, age 85, both hemispheres 59.5
2045 Male, age 76, both hemispheres 59.2
2082 Female, age 91, right hemisphere 57.7
2527 Male, age 74, both hemispheres 57.5
Hippocampus, CA2
nTPM: 58.8
1963 Male, age 80, left hemisphere 60.7
1892 Male, age 76, both hemispheres 60.5
2437 Female, age 94, left hemisphere 58.9
1940 Female, age 85, left hemisphere 58.8
2249 Male, age 74, both hemispheres 57.7
2113 Female, age 91, right hemisphere 56.4
Hippocampus, CA3
nTPM: 58.8
2861 Female, age 67, both hemispheres 61.1
2137 Male, age 80, left hemisphere 59.5
1867 Male, age 76, both hemispheres 59.2
2436 Male, age 74, both hemispheres 57.8
2620 Female, age 94, left hemisphere 57.7
1891 Female, age 85, both hemispheres 57.6
Parahippocampal cortex
nTPM: 59.7
1850 Male, age 80, both hemispheres 64.2
2532 Female, age 72, left hemisphere 60.8
1933 Female, age 85, both hemispheres 60.6
1990 Female, age 91, right hemisphere 60.1
2692 Male, age 74, both hemispheres 59.9
2250 Female, age 67, right hemisphere 59.4
2693 Female, age 94, both hemispheres 59.3
2622 Female, age 67, right hemisphere 58.6
2245 Female, age 91, both hemispheres 57.5
2018 Male, age 76, both hemispheres 57.1
Perirhinal gyrus
nTPM: 62.2
1794 Male, age 80, right hemisphere 64.5
1847 Female, age 91, left hemisphere 63.5
1841 Female, age 85, right hemisphere 63.1
2848 Male, age 76, right hemisphere 61.0
2521 Female, age 94, right hemisphere 59.3
Subiculum
nTPM: 58.1
2438 Female, age 94, left hemisphere 60.4
1977 Female, age 85, both hemispheres 59.2
2619 Male, age 74, both hemispheres 59.0
1901 Male, age 80, both hemispheres 57.2
2729 Female, age 91, right hemisphere 56.9
2042 Male, age 76, both hemispheres 56.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 43.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 43.9
Samples: 197

Max nTPM: 89.1
Min nTPM: 23.8
Std nTPM: 10.5
Median nTPM: 42.2
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 89.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 87.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 75.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 72.9
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 70.3
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 68.4
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 68.2
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 66.2
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 64.2
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 62.7
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 61.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 23.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 23.1
FF:10153-102I9 76 years, female 26.5
FF:10169-103B7 60 years, female 19.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 26.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 25.7
Samples: 4

Max nTPM: 27.9
Min nTPM: 23.3
Sample A Male 23.3
Sample B Male 25.4
Sample C Female 26.0
Sample D Female 27.9
Hippocampal formation
nTPM: 26.5
Samples: 4

Max nTPM: 30.2
Min nTPM: 22.6
Sample A Male 30.2
Sample B Male 22.6
Sample C Female 25.4
Sample D Female 27.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.