HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:31.7 nTPM
HPA:31.7 nTPM
GTEx:34.8 nTPM
FANTOM5:12.2 Scaled Tags Per Million
Pig:4.9 nTPM
Mouse:4.5 nTPM
Allen mouse:5.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA038705Antibody HPA038706
Glial cells Not detectedNot detected
Neuronal cells LowLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 31.7
Sample id Sample description nTPM
Hippocampus
nTPM: 31.2
1898 Male, age 80, left hemisphere 33.5
2148 Female, age 91, left hemisphere 31.0
2529 Female, age 94, left hemisphere 31.0
1911 Female, age 85, right hemisphere 30.8
2621 Female, age 67, right hemisphere 30.6
1855 Male, age 76, left hemisphere 30.5
Dentate gyrus
nTPM: 31.3
2010 Male, age 76, both hemispheres 32.6
2530 Female, age 94, left hemisphere 32.6
2528 Male, age 74, both hemispheres 31.8
2531 Female, age 67, both hemispheres 30.4
1927 Female, age 91, both hemispheres 30.2
2246 Female, age 85, both hemispheres 30.1
Entorhinal gyrus
nTPM: 30.8
2686 Male, age 75, right hemisphere 31.6
2117 Female, age 91, right hemisphere 31.5
2764 Male, age 80, right hemisphere 31.0
1787 Male, age 76, left hemisphere 30.7
1938 Female, age 85, left hemisphere 30.3
2613 Female, age 94, left hemisphere 29.5
Hippocampus, CA1
nTPM: 30.6
2749 Male, age 80, left hemisphere 31.8
2527 Male, age 74, both hemispheres 31.2
1873 Female, age 85, both hemispheres 30.1
2082 Female, age 91, right hemisphere 30.1
2045 Male, age 76, both hemispheres 29.7
Hippocampus, CA2
nTPM: 31.7
1963 Male, age 80, left hemisphere 32.8
1892 Male, age 76, both hemispheres 32.7
2249 Male, age 74, both hemispheres 32.6
2437 Female, age 94, left hemisphere 32.0
2113 Female, age 91, right hemisphere 30.4
1940 Female, age 85, left hemisphere 29.7
Hippocampus, CA3
nTPM: 30.8
2436 Male, age 74, both hemispheres 31.9
1867 Male, age 76, both hemispheres 31.3
1891 Female, age 85, both hemispheres 31.1
2137 Male, age 80, left hemisphere 30.2
2861 Female, age 67, both hemispheres 30.2
2620 Female, age 94, left hemisphere 30.1
Parahippocampal cortex
nTPM: 29.9
2250 Female, age 67, right hemisphere 30.8
2018 Male, age 76, both hemispheres 30.6
1990 Female, age 91, right hemisphere 30.3
2622 Female, age 67, right hemisphere 30.2
1850 Male, age 80, both hemispheres 30.1
2245 Female, age 91, both hemispheres 29.7
2692 Male, age 74, both hemispheres 29.6
1933 Female, age 85, both hemispheres 29.4
2693 Female, age 94, both hemispheres 29.2
2532 Female, age 72, left hemisphere 29.0
Perirhinal gyrus
nTPM: 28.9
1847 Female, age 91, left hemisphere 29.8
1794 Male, age 80, right hemisphere 29.3
1841 Female, age 85, right hemisphere 29.2
2521 Female, age 94, right hemisphere 28.1
2848 Male, age 76, right hemisphere 28.1
Subiculum
nTPM: 30.8
1901 Male, age 80, both hemispheres 33.0
1977 Female, age 85, both hemispheres 31.4
2619 Male, age 74, both hemispheres 31.4
2042 Male, age 76, both hemispheres 31.2
2729 Female, age 91, right hemisphere 30.5
2438 Female, age 94, left hemisphere 27.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 34.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 34.8
Samples: 197

Max nTPM: 61.5
Min nTPM: 15.4
Std nTPM: 8.5
Median nTPM: 34.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 61.5
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 56.3
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 56.0
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 54.7
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 53.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 53.5
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 52.9
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 52.7
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 50.6
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 50.3
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 50.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 12.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 12.2
FF:10153-102I9 76 years, female 16.0
FF:10169-103B7 60 years, female 8.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 4.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 4.2
Samples: 4

Max nTPM: 5.9
Min nTPM: 3.2
Sample A Female 5.9
Sample B Female 3.2
Sample C Male 4.3
Sample D Male 3.5
Entorhinal cortex
nTPM: 4.9
Samples: 4

Max nTPM: 6.0
Min nTPM: 4.4
Sample A Female 6.0
Sample B Female 4.4
Sample C Male 4.7
Sample D Male 4.4
Subiculum
nTPM: 4.4
Samples: 4

Max nTPM: 6.8
Min nTPM: 3.4
Sample A Female 6.8
Sample B Female 3.4
Sample C Male 3.6
Sample D Male 3.6
Ventral hippocampus
nTPM: 4.2
Samples: 4

Max nTPM: 5.5
Min nTPM: 3.2
Sample A Female 5.5
Sample B Female 3.2
Sample C Male 4.5
Sample D Male 3.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 4.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 3.7
Samples: 4

Max nTPM: 4.5
Min nTPM: 3.2
Sample A Male 4.5
Sample B Male 3.3
Sample C Female 3.9
Sample D Female 3.2
Hippocampal formation
nTPM: 4.5
Samples: 4

Max nTPM: 5.7
Min nTPM: 3.6
Sample A Male 5.0
Sample B Male 3.6
Sample C Female 3.7
Sample D Female 5.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.3
68744725 Antisense, RP_050208_01_E04, Mouse strain C57BL/6J (56 days, male) 5.3

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