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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:746.8 nTPM
FANTOM5:1059.8 Scaled Tags Per Million
Pig:144.1 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA004177Antibody CAB006252
Glial cells Not detectedLow
Neuronal cells -High




CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 746.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 746.8
Samples: 246

Max nTPM: 1321.4
Min nTPM: 339.1
Std nTPM: 197.8
Median nTPM: 727.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 1321.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 1311.0
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 1278.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 1240.0
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 1236.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 1229.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 1158.6
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 1155.7
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 1148.9
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 1135.3
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 1122.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 1090.1
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 1086.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 1085.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 1065.2
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 1061.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 1060.5
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 1049.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 1046.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 1042.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 1039.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 1039.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 1038.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 1025.7
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 1023.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 1018.7
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 1016.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 1014.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 1008.0
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 997.2
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 995.6
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 981.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 978.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 976.8
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 972.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 967.3
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 966.7
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 956.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 949.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 949.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 940.6
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 939.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 937.7
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 934.5
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 932.3
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 927.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 925.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 914.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 906.1
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 904.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 901.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 901.2
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 893.0
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 892.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 892.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 889.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 887.7
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 885.8
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 879.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 874.7
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 874.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 874.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 871.8
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 871.7
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 868.8
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 861.1
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 859.6
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 859.0
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 857.5
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 857.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 843.7
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 838.7
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 837.9
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 835.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 833.8
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 833.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 830.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 829.8
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 827.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 825.6
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 825.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 823.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 820.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 818.0
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 818.0
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 815.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 812.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 812.6
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 811.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 806.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 806.1
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 804.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 799.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 796.4
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 795.3
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 793.1
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 792.3
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 791.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 789.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 779.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 778.2
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 774.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 773.2
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 767.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 765.7
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 764.3
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 763.7
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 761.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 759.1
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 757.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 757.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 754.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 753.0
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 743.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 737.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 735.0
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 733.8
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 733.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 733.1
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 731.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 729.3
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 729.3
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 728.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 726.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 725.9
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 725.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 723.1
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 722.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 722.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 722.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 721.9
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 720.9
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 718.5
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 717.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 715.5
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 710.0
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 708.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 707.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 704.9
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 695.4
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 690.8
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 690.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 690.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 685.6
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 684.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 684.5
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 682.4
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 681.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 680.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 676.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 675.2
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 671.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 670.2
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 668.0
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 667.9
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 665.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 661.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 660.5
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 660.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 652.7
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 649.3
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 648.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 645.6
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 640.2
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 639.7
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 636.6
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 635.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 635.6
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 634.7
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 633.9
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 625.0
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 625.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 621.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 620.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 620.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 620.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 620.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 616.2
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 614.2
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 613.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 613.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 605.9
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 600.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 596.6
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 596.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 590.8
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 590.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 585.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 583.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 583.5
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 580.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 573.3
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 570.6
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 570.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 568.1
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 565.5
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 564.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 562.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 559.3
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 558.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 556.3
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 556.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 556.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 550.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 550.2
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 549.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 547.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 536.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 536.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 534.7
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 533.1
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 531.6
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 531.0
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 528.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 528.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 528.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 524.2
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 523.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 522.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 522.1
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 521.7
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 516.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 515.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 507.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 502.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 499.7
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 494.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 493.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 484.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 478.3
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 472.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 467.7
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 467.4
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 464.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 457.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 438.4
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 412.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 411.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 409.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 407.8
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 404.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 401.9
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 391.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 388.9
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 348.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 339.1
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 1059.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 1059.8
FF:10164-103B2 76 years, female 1059.8

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 144.1
Pig sample Sample description nTPM
Caudate
nTPM: 144.2
Samples: 4

Max nTPM: 179.3
Min nTPM: 112.9
Sample A Female 112.9
Sample B Female 150.0
Sample C Male 179.3
Sample D Male 134.4

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