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A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.
Protein expressioni
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis
HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM
17.0
Sample id
Sample description
nTPM
Hippocampus nTPM: 15.2
2148
Female, age 91, left hemisphere
23.8
2621
Female, age 67, right hemisphere
21.9
1898
Male, age 80, left hemisphere
14.2
2529
Female, age 94, left hemisphere
10.7
1855
Male, age 76, left hemisphere
10.2
1911
Female, age 85, right hemisphere
10.2
Dentate gyrus nTPM: 16.1
2531
Female, age 67, both hemispheres
23.2
1927
Female, age 91, both hemispheres
21.5
2530
Female, age 94, left hemisphere
18.5
2528
Male, age 74, both hemispheres
16.7
2246
Female, age 85, both hemispheres
10.4
2010
Male, age 76, both hemispheres
6.6
Entorhinal gyrus nTPM: 12.5
2613
Female, age 94, left hemisphere
22.5
2686
Male, age 75, right hemisphere
15.9
2764
Male, age 80, right hemisphere
12.7
1787
Male, age 76, left hemisphere
10.0
1938
Female, age 85, left hemisphere
9.3
2117
Female, age 91, right hemisphere
4.6
Hippocampus, CA1 nTPM: 12.6
2749
Male, age 80, left hemisphere
21.0
2527
Male, age 74, both hemispheres
14.8
1873
Female, age 85, both hemispheres
12.7
2045
Male, age 76, both hemispheres
8.3
2082
Female, age 91, right hemisphere
6.2
Hippocampus, CA2 nTPM: 11.9
2437
Female, age 94, left hemisphere
18.2
1963
Male, age 80, left hemisphere
16.9
1892
Male, age 76, both hemispheres
13.0
2249
Male, age 74, both hemispheres
9.6
2113
Female, age 91, right hemisphere
7.5
1940
Female, age 85, left hemisphere
5.9
Hippocampus, CA3 nTPM: 17.0
2861
Female, age 67, both hemispheres
30.4
2620
Female, age 94, left hemisphere
30.3
2137
Male, age 80, left hemisphere
18.7
1867
Male, age 76, both hemispheres
8.0
1891
Female, age 85, both hemispheres
7.7
2436
Male, age 74, both hemispheres
7.1
Parahippocampal cortex nTPM: 12.6
2622
Female, age 67, right hemisphere
20.2
2245
Female, age 91, both hemispheres
19.5
2250
Female, age 67, right hemisphere
17.8
2693
Female, age 94, both hemispheres
15.2
2692
Male, age 74, both hemispheres
12.0
1990
Female, age 91, right hemisphere
11.3
1933
Female, age 85, both hemispheres
9.4
2532
Female, age 72, left hemisphere
8.9
1850
Male, age 80, both hemispheres
8.2
2018
Male, age 76, both hemispheres
3.5
Perirhinal gyrus nTPM: 11.3
2521
Female, age 94, right hemisphere
19.4
1847
Female, age 91, left hemisphere
13.6
1794
Male, age 80, right hemisphere
10.7
1841
Female, age 85, right hemisphere
7.3
2848
Male, age 76, right hemisphere
5.7
Subiculum nTPM: 9.1
2619
Male, age 74, both hemispheres
16.2
2438
Female, age 94, left hemisphere
10.7
2729
Female, age 91, right hemisphere
9.4
1901
Male, age 80, both hemispheres
8.7
1977
Female, age 85, both hemispheres
7.3
2042
Male, age 76, both hemispheres
2.5
HIPPOCAMPAL FORMATION - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM: 97.1
Min nTPM: 1.6
Std nTPM: 16.7
Median nTPM: 32.0
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
97.1
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
90.7
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
76.8
GTEX-1HT8W-0011-R1b-SM-CJI3V
30-39 years, male
72.8
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
72.1
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
66.8
GTEX-1GMR8-0011-R1b-SM-CJI2O
50-59 years, female
62.8
GTEX-1EWIQ-0011-R1a-SM-9OSX7
70-79 years, female
57.8
GTEX-1HSMO-0011-R1a-SM-CM2SV
60-69 years, male
57.2
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
56.9
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
56.3
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
55.4
GTEX-1EX96-0011-R1a-SM-CE6R5
50-59 years, male
55.3
GTEX-1LG7Y-0011-R1a-SM-EYYWV
50-59 years, male
54.9
GTEX-14BIM-0011-R1a-SM-69LQI
60-69 years, female
54.5
GTEX-1F6I4-0011-R1a-SM-9OSWU
60-69 years, male
54.1
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
53.1
GTEX-1A8G6-0011-R1a-SM-7P8PC
60-69 years, male
52.1
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
51.7
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
51.5
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
51.2
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
50.9
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
50.7
GTEX-1GTWX-0011-R1a-SM-CE6RL
60-69 years, male
50.7
GTEX-1GF9W-0011-R1a-SM-9QEIQ
60-69 years, male
50.5
GTEX-1IKK5-0011-R1b-SM-CE6SQ
60-69 years, male
50.4
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
48.4
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
47.4
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
46.8
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
46.8
GTEX-11GS4-0011-R1a-SM-DO129
60-69 years, male
45.9
GTEX-1CB4G-0011-R1b-SM-9QEHT
60-69 years, male
45.8
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
45.6
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
45.3
GTEX-1C6VR-0011-R1a-SM-7MXUE
60-69 years, male
45.2
GTEX-14PN4-0011-R1b-SM-69LP8
50-59 years, male
44.9
GTEX-1GN1U-0011-R1a-SM-CJI25
50-59 years, female
44.8
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
44.6
GTEX-17F97-0011-R1b-SM-7IGM9
50-59 years, male
44.6
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
44.3
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
43.4
GTEX-1H3VE-0011-R1a-SM-A9G1K
40-49 years, male
42.8
GTEX-RNOR-0011-R1A-SM-CNNP5
50-59 years, female
42.8
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
42.4
GTEX-1J8Q2-0011-R1a-SM-D4P2D
60-69 years, male
42.4
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
42.3
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
42.2
GTEX-P44G-0011-R1A-SM-2I3FE
30-39 years, male
42.2
GTEX-1J1OQ-0011-R1a-SM-A9G1Z
40-49 years, female
42.1
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
41.4
GTEX-11EI6-0011-R1a-SM-DO93L
60-69 years, male
41.2
GTEX-1B8SF-0011-R1b-SM-7P8Q8
60-69 years, male
41.2
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
41.0
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
41.0
GTEX-11GSP-0011-R1a-SM-9QEJ3
60-69 years, female
40.9
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
40.7
GTEX-14JIY-0011-R1a-SM-68713
60-69 years, male
40.3
GTEX-17HG3-0011-R1a-SM-7LG6H
30-39 years, female
40.2
GTEX-1E1VI-0011-R1a-SM-ARZMM
50-59 years, male
40.1
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
39.6
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
38.7
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
38.6
GTEX-1IOXB-0011-R1a-SM-D4P27
50-59 years, male
38.5
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
38.4
GTEX-14E6D-0011-R1b-SM-5YYAW
50-59 years, male
38.4
GTEX-11DXW-0011-R1a-SM-DNZZD
40-49 years, male
38.4
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
38.2
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
38.2
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
37.9
GTEX-16Z82-0011-R1b-SM-7EPHZ
60-69 years, male
37.7
GTEX-1F75A-0011-R1b-SM-CE6RA
50-59 years, male
37.5
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
37.4
GTEX-1GN73-0011-R1a-SM-CKZNT
60-69 years, male
37.4
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
37.3
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
37.3
GTEX-1C64N-0011-R1b-SM-7P8Q7
50-59 years, male
37.1
GTEX-1EH9U-0011-R1b-SM-CJI2B
60-69 years, male
36.9
GTEX-1EMGI-0011-R1b-SM-9OSWZ
60-69 years, male
36.9
GTEX-1GN2E-0011-R1b-SM-CE6RJ
60-69 years, male
36.8
GTEX-ZDXO-0011-R1a-SM-4WKF4
60-69 years, male
36.7
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
36.5
GTEX-16YQH-0011-R1a-SM-7LT8R
30-39 years, male
36.3
GTEX-1I1HK-0011-R1b-SM-CM2T7
60-69 years, male
36.3
GTEX-1I1GS-0011-R1a-SM-CJI43
60-69 years, male
35.6
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
35.4
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
35.1
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
34.9
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
34.5
GTEX-1A3MX-0011-R1b-SM-7P8PH
60-69 years, male
34.5
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
34.1
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
33.7
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
33.5
GTEX-11WQC-0011-R1b-SM-DO932
60-69 years, male
33.5
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
32.8
GTEX-15ER7-0011-R1b-SM-7KUE1
20-29 years, female
32.7
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
32.6
GTEX-15DCD-0011-R1b-SM-6LPIJ
70-79 years, female
32.5
GTEX-17HHY-0011-R1a-SM-7189V
50-59 years, male
32.5
GTEX-1IY9M-0011-R1a-SM-EXURZ
60-69 years, male
32.0
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y
40-49 years, male
31.9
GTEX-14ABY-0011-R1a-SM-6EU2W
50-59 years, male
31.7
GTEX-1GZHY-0011-R1a-SM-CE6RR
50-59 years, female
31.7
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
31.4
GTEX-1H1ZS-0011-R1b-SM-A9G1E
70-79 years, male
31.4
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
30.9
GTEX-1F48J-0011-R1a-SM-9QEIC
50-59 years, female
30.9
GTEX-13NZ8-0011-R1b-SM-5KM3V
60-69 years, female
30.5
GTEX-1H3NZ-0011-R1a-SM-CKZP5
60-69 years, male
30.3
GTEX-14PJM-0011-R1a-SM-CNPO3
50-59 years, female
29.7
GTEX-1ICLZ-0011-R1b-SM-A9SM3
60-69 years, male
29.5
GTEX-1HR98-0011-R1a-SM-ARZLQ
60-69 years, male
29.3
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
29.2
GTEX-1B933-0011-R1b-SM-9QEGW
50-59 years, female
29.1
GTEX-1GF9V-0011-R1a-SM-CKZNQ
60-69 years, male
29.1
GTEX-1B8L1-0011-R1a-SM-7P8SS
60-69 years, male
28.9
GTEX-1AX9I-0011-R1b-SM-7RHG2
60-69 years, male
28.2
GTEX-14LLW-0011-R1a-SM-5ZZVD
70-79 years, female
27.5
GTEX-16NPV-0011-R1b-SM-7MGVZ
50-59 years, female
27.5
GTEX-1EKGG-0011-R1b-SM-9QEI1
60-69 years, male
27.4
GTEX-1IDJH-0011-R1b-SM-ARU6U
70-79 years, male
27.2
GTEX-N7MT-0011-R1a-SM-CNPO1
60-69 years, female
27.2
GTEX-1CAV2-0011-R1a-SM-ARZML
40-49 years, female
26.6
GTEX-1HGF4-0011-R1a-SM-CJI3S
60-69 years, male
26.5
GTEX-OHPN-0011-R1A-SM-2I5GB
60-69 years, female
26.4
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
26.2
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
26.0
GTEX-14C5O-0011-R1b-SM-6AJBW
60-69 years, male
25.9
GTEX-1B996-0011-R1b-SM-7P8PO
60-69 years, male
24.6
GTEX-17JCI-0011-R1b-SM-718A3
60-69 years, female
24.5
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
23.6
GTEX-14LZ3-0011-R1a-SM-69LP5
60-69 years, female
23.5
GTEX-16XZZ-0011-R1a-SM-7LTAH
60-69 years, male
22.9
GTEX-1H3O1-0011-R1b-SM-CL554
60-69 years, male
22.9
GTEX-1HSKV-0011-R1b-SM-CMKH7
60-69 years, male
22.2
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
22.0
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
22.0
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
21.4
GTEX-17HII-0011-R1b-SM-7MGVW
50-59 years, male
21.4
GTEX-1HBPI-0011-R1b-SM-A9SKF
50-59 years, male
21.4
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
21.2
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
20.7
GTEX-17MF6-0011-R1a-SM-72D6O
40-49 years, male
20.5
GTEX-14PJO-0011-R1b-SM-6AJAK
60-69 years, male
20.4
GTEX-15CHQ-0011-R1a-SM-COH27
60-69 years, male
20.1
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
19.0
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
18.8
GTEX-1H1CY-0011-R1a-SM-CKZOZ
60-69 years, female
18.8
GTEX-1F75W-0011-R1a-SM-ARU81
60-69 years, male
18.7
GTEX-1I1GQ-0011-R1a-SM-CY8GG
50-59 years, male
18.5
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
17.9
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
17.5
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
17.2
GTEX-14PQA-0011-R1b-SM-6EU1G
50-59 years, female
17.2
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
17.2
GTEX-17EVP-0011-R1a-SM-7DHLA
40-49 years, male
17.1
GTEX-1LB8K-0011-R1b-SM-EZ6MV
50-59 years, male
17.1
GTEX-15UF6-0011-R1a-SM-9QEGH
70-79 years, female
17.0
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
16.6
GTEX-1H1DG-0011-R1b-SM-CKZP1
70-79 years, male
15.6
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
15.3
GTEX-183WM-0011-R1a-SM-718A8
70-79 years, female
14.2
GTEX-1H4P4-0011-R1b-SM-CL54V
50-59 years, male
13.7
GTEX-1A32A-0011-R1a-SM-7P8SQ
50-59 years, female
12.9
GTEX-1F6IF-0011-R1b-SM-9WG78
60-69 years, male
12.8
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
12.7
GTEX-1E2YA-0011-R1b-SM-CJI29
50-59 years, male
12.6
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
12.5
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
12.3
GTEX-1C6VQ-0011-R1a-SM-7P8Q2
50-59 years, male
12.1
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
11.9
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
11.5
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
11.2
GTEX-16GPK-0011-R1b-SM-7EWDH
60-69 years, male
10.8
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
10.5
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
10.1
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
9.3
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
9.1
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
8.8
GTEX-1BAJH-0011-R1a-SM-7P8SV
70-79 years, male
8.7
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
8.4
GTEX-14E7W-0011-R1b-SM-5YYAT
70-79 years, male
7.8
GTEX-17EVQ-0011-R1a-SM-7189S
70-79 years, male
7.8
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
7.6
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
7.0
GTEX-11TUW-0011-R1a-SM-DO92S
60-69 years, male
6.6
GTEX-1I1GV-0011-R1a-SM-CL559
60-69 years, male
6.4
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
5.9
GTEX-1H23P-0011-R1a-SM-ACKVC
60-69 years, male
5.9
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
5.8
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
5.7
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
5.7
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
5.6
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
4.8
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
4.6
GTEX-X4EP-0011-R1A-SM-3P624
60-69 years, female
3.7
GTEX-18A6Q-0011-R1b-SM-731DI
60-69 years, male
3.2
GTEX-1CB4J-0011-R1a-SM-9WG64
60-69 years, male
1.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.