HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:60.3 nTPM
HPA:60.3 nTPM
GTEx:42.2 nTPM
FANTOM5:40.8 Scaled Tags Per Million
Pig:29.8 nTPM
Mouse:33.0 nTPM
Allen mouse:0.7 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 60.3
Sample id Sample description nTPM
Hippocampus
nTPM: 34.8
1898 Male, age 80, left hemisphere 38.9
1855 Male, age 76, left hemisphere 37.0
2621 Female, age 67, right hemisphere 36.3
2148 Female, age 91, left hemisphere 36.0
1911 Female, age 85, right hemisphere 30.2
2529 Female, age 94, left hemisphere 30.2
Dentate gyrus
nTPM: 39.1
2246 Female, age 85, both hemispheres 42.8
1927 Female, age 91, both hemispheres 41.5
2530 Female, age 94, left hemisphere 41.5
2531 Female, age 67, both hemispheres 38.9
2010 Male, age 76, both hemispheres 37.3
2528 Male, age 74, both hemispheres 32.8
Entorhinal gyrus
nTPM: 46.4
2613 Female, age 94, left hemisphere 57.6
2764 Male, age 80, right hemisphere 57.2
1787 Male, age 76, left hemisphere 50.8
1938 Female, age 85, left hemisphere 49.3
2686 Male, age 75, right hemisphere 36.4
2117 Female, age 91, right hemisphere 27.2
Hippocampus, CA1
nTPM: 41.0
2749 Male, age 80, left hemisphere 50.4
2082 Female, age 91, right hemisphere 49.3
1873 Female, age 85, both hemispheres 41.0
2045 Male, age 76, both hemispheres 36.7
2527 Male, age 74, both hemispheres 27.8
Hippocampus, CA2
nTPM: 42.2
1940 Female, age 85, left hemisphere 56.1
1892 Male, age 76, both hemispheres 42.6
2113 Female, age 91, right hemisphere 40.7
1963 Male, age 80, left hemisphere 39.7
2249 Male, age 74, both hemispheres 38.6
2437 Female, age 94, left hemisphere 35.2
Hippocampus, CA3
nTPM: 38.9
2620 Female, age 94, left hemisphere 50.7
2137 Male, age 80, left hemisphere 43.4
1867 Male, age 76, both hemispheres 38.4
2861 Female, age 67, both hemispheres 37.9
2436 Male, age 74, both hemispheres 31.7
1891 Female, age 85, both hemispheres 31.1
Parahippocampal cortex
nTPM: 48.2
1850 Male, age 80, both hemispheres 59.9
2532 Female, age 72, left hemisphere 58.4
2622 Female, age 67, right hemisphere 56.6
1933 Female, age 85, both hemispheres 51.2
2250 Female, age 67, right hemisphere 46.3
2693 Female, age 94, both hemispheres 45.5
1990 Female, age 91, right hemisphere 44.5
2018 Male, age 76, both hemispheres 43.1
2245 Female, age 91, both hemispheres 42.7
2692 Male, age 74, both hemispheres 33.8
Perirhinal gyrus
nTPM: 60.3
1794 Male, age 80, right hemisphere 69.8
1847 Female, age 91, left hemisphere 64.3
2521 Female, age 94, right hemisphere 60.4
1841 Female, age 85, right hemisphere 59.1
2848 Male, age 76, right hemisphere 47.7
Subiculum
nTPM: 33.5
1977 Female, age 85, both hemispheres 40.5
1901 Male, age 80, both hemispheres 35.0
2042 Male, age 76, both hemispheres 32.6
2619 Male, age 74, both hemispheres 32.6
2438 Female, age 94, left hemisphere 32.0
2729 Female, age 91, right hemisphere 28.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 42.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 42.2
Samples: 197

Max nTPM: 144.4
Min nTPM: 0.4
Std nTPM: 24.5
Median nTPM: 37.4
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 144.4
GTEX-1I1HK-0011-R1b-SM-CM2T7 60-69 years, male 134.7
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 113.9
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 109.2
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 103.4
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 100.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 98.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 95.4
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 92.2
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 85.4
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 80.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 40.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 40.8
FF:10169-103B7 60 years, female 51.2
FF:10153-102I9 76 years, female 30.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 29.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 18.2
Samples: 4

Max nTPM: 22.2
Min nTPM: 13.6
Sample A Female 21.3
Sample B Female 22.2
Sample C Male 13.6
Sample D Male 15.8
Entorhinal cortex
nTPM: 29.8
Samples: 4

Max nTPM: 36.2
Min nTPM: 25.3
Sample A Female 36.2
Sample B Female 29.0
Sample C Male 28.7
Sample D Male 25.3
Subiculum
nTPM: 19.0
Samples: 4

Max nTPM: 22.4
Min nTPM: 15.8
Sample A Female 22.4
Sample B Female 15.8
Sample C Male 19.6
Sample D Male 18.2
Ventral hippocampus
nTPM: 16.9
Samples: 4

Max nTPM: 22.6
Min nTPM: 13.9
Sample A Female 13.9
Sample B Female 15.6
Sample C Male 22.6
Sample D Male 15.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 33.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 33.0
Samples: 4

Max nTPM: 40.8
Min nTPM: 25.9
Sample A Male 33.6
Sample B Male 40.8
Sample C Female 25.9
Sample D Female 31.7
Hippocampal formation
nTPM: 11.1
Samples: 4

Max nTPM: 15.2
Min nTPM: 5.9
Sample A Male 15.2
Sample B Male 11.4
Sample C Female 5.9
Sample D Female 11.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.7
76135829 Antisense, RP_060518_01_A10, Mouse strain C57BL/6J (56 days, male) 1.0
68861994 Antisense, RP_050301_01_C08, Mouse strain C57BL/6J (56 days, male) 0.4

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