HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:17.3 nTPM
HPA:17.3 nTPM
GTEx:20.0 nTPM
FANTOM5:15.0 Scaled Tags Per Million
Pig:10.0 nTPM
Mouse:14.5 nTPM
Allen mouse:0.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039561Antibody HPA048126
Glial cells LowNot detected
Neuronal cells MediumLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 17.3
Sample id Sample description nTPM
Hippocampus
nTPM: 15.2
2148 Female, age 91, left hemisphere 17.5
1911 Female, age 85, right hemisphere 16.2
1855 Male, age 76, left hemisphere 15.4
2621 Female, age 67, right hemisphere 15.1
2529 Female, age 94, left hemisphere 14.1
1898 Male, age 80, left hemisphere 13.1
Dentate gyrus
nTPM: 16.0
2531 Female, age 67, both hemispheres 18.7
2246 Female, age 85, both hemispheres 17.0
1927 Female, age 91, both hemispheres 16.8
2528 Male, age 74, both hemispheres 15.1
2010 Male, age 76, both hemispheres 14.5
2530 Female, age 94, left hemisphere 14.0
Entorhinal gyrus
nTPM: 16.6
2613 Female, age 94, left hemisphere 18.7
2686 Male, age 75, right hemisphere 18.4
1787 Male, age 76, left hemisphere 16.2
1938 Female, age 85, left hemisphere 15.7
2764 Male, age 80, right hemisphere 15.7
2117 Female, age 91, right hemisphere 15.2
Hippocampus, CA1
nTPM: 16.2
2082 Female, age 91, right hemisphere 18.2
2045 Male, age 76, both hemispheres 17.3
1873 Female, age 85, both hemispheres 16.0
2527 Male, age 74, both hemispheres 14.9
2749 Male, age 80, left hemisphere 14.7
Hippocampus, CA2
nTPM: 14.5
1940 Female, age 85, left hemisphere 16.1
1963 Male, age 80, left hemisphere 16.0
2113 Female, age 91, right hemisphere 15.6
2249 Male, age 74, both hemispheres 14.6
1892 Male, age 76, both hemispheres 13.7
2437 Female, age 94, left hemisphere 11.1
Hippocampus, CA3
nTPM: 16.4
2436 Male, age 74, both hemispheres 17.9
2861 Female, age 67, both hemispheres 17.0
2137 Male, age 80, left hemisphere 16.8
2620 Female, age 94, left hemisphere 16.6
1891 Female, age 85, both hemispheres 15.4
1867 Male, age 76, both hemispheres 14.7
Parahippocampal cortex
nTPM: 17.3
2693 Female, age 94, both hemispheres 21.7
2622 Female, age 67, right hemisphere 19.3
2532 Female, age 72, left hemisphere 18.1
2692 Male, age 74, both hemispheres 17.5
2245 Female, age 91, both hemispheres 17.1
1850 Male, age 80, both hemispheres 16.9
1933 Female, age 85, both hemispheres 16.0
1990 Female, age 91, right hemisphere 15.7
2018 Male, age 76, both hemispheres 15.7
2250 Female, age 67, right hemisphere 14.9
Perirhinal gyrus
nTPM: 16.7
2521 Female, age 94, right hemisphere 20.9
2848 Male, age 76, right hemisphere 16.9
1794 Male, age 80, right hemisphere 15.7
1841 Female, age 85, right hemisphere 15.3
1847 Female, age 91, left hemisphere 14.9
Subiculum
nTPM: 15.0
2729 Female, age 91, right hemisphere 16.9
1901 Male, age 80, both hemispheres 15.7
1977 Female, age 85, both hemispheres 15.4
2042 Male, age 76, both hemispheres 15.4
2619 Male, age 74, both hemispheres 15.1
2438 Female, age 94, left hemisphere 11.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 20.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 20.0
Samples: 197

Max nTPM: 43.0
Min nTPM: 10.2
Std nTPM: 5.9
Median nTPM: 18.7
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 43.0
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 38.9
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 38.8
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 38.3
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 37.7
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 37.0
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 33.8
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 33.7
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 32.6
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 32.0
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 31.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 15.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 15.0
FF:10153-102I9 76 years, female 21.7
FF:10169-103B7 60 years, female 8.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 10.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 9.1
Samples: 4

Max nTPM: 11.2
Min nTPM: 6.7
Sample A Female 11.2
Sample B Female 9.6
Sample C Male 8.9
Sample D Male 6.7
Entorhinal cortex
nTPM: 8.9
Samples: 4

Max nTPM: 9.9
Min nTPM: 7.9
Sample A Female 8.7
Sample B Female 9.0
Sample C Male 9.9
Sample D Male 7.9
Subiculum
nTPM: 9.7
Samples: 4

Max nTPM: 12.0
Min nTPM: 8.0
Sample A Female 12.0
Sample B Female 9.0
Sample C Male 9.6
Sample D Male 8.0
Ventral hippocampus
nTPM: 10.0
Samples: 4

Max nTPM: 12.9
Min nTPM: 8.3
Sample A Female 10.1
Sample B Female 8.3
Sample C Male 12.9
Sample D Male 8.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 14.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 14.5
Samples: 4

Max nTPM: 15.3
Min nTPM: 13.8
Sample A Male 13.9
Sample B Male 14.9
Sample C Female 13.8
Sample D Female 15.3
Hippocampal formation
nTPM: 14.6
Samples: 4

Max nTPM: 15.2
Min nTPM: 13.3
Sample A Male 14.6
Sample B Male 13.3
Sample C Female 15.2
Sample D Female 15.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.6
71608433 Antisense, RP_050927_01_G02, Mouse strain C57BL/6J (56 days, male) 0.6

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