HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:147.4 nTPM
HPA:147.4 nTPM
GTEx:195.4 nTPM
FANTOM5:401.0 Scaled Tags Per Million
Pig:29.4 nTPM
Mouse:22.0 nTPM
Allen mouse:0.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA011352Antibody CAB012273
Glial cells MediumMedium
Neuronal cells HighHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 147.4
Sample id Sample description nTPM
Hippocampus
nTPM: 140.9
1898 Male, age 80, left hemisphere 159.4
1855 Male, age 76, left hemisphere 152.9
1911 Female, age 85, right hemisphere 138.5
2529 Female, age 94, left hemisphere 136.2
2621 Female, age 67, right hemisphere 134.9
2148 Female, age 91, left hemisphere 123.5
Dentate gyrus
nTPM: 142.6
2010 Male, age 76, both hemispheres 165.7
2530 Female, age 94, left hemisphere 161.2
1927 Female, age 91, both hemispheres 149.5
2246 Female, age 85, both hemispheres 133.2
2531 Female, age 67, both hemispheres 123.4
2528 Male, age 74, both hemispheres 122.3
Entorhinal gyrus
nTPM: 132.5
1938 Female, age 85, left hemisphere 139.4
2764 Male, age 80, right hemisphere 136.6
1787 Male, age 76, left hemisphere 136.5
2686 Male, age 75, right hemisphere 133.9
2117 Female, age 91, right hemisphere 128.2
2613 Female, age 94, left hemisphere 120.7
Hippocampus, CA1
nTPM: 147.4
2749 Male, age 80, left hemisphere 176.3
1873 Female, age 85, both hemispheres 157.4
2045 Male, age 76, both hemispheres 143.6
2082 Female, age 91, right hemisphere 131.3
2527 Male, age 74, both hemispheres 128.5
Hippocampus, CA2
nTPM: 143.6
1892 Male, age 76, both hemispheres 177.2
1963 Male, age 80, left hemisphere 155.1
2437 Female, age 94, left hemisphere 137.3
2249 Male, age 74, both hemispheres 133.2
1940 Female, age 85, left hemisphere 129.8
2113 Female, age 91, right hemisphere 129.1
Hippocampus, CA3
nTPM: 137.1
1867 Male, age 76, both hemispheres 165.8
2137 Male, age 80, left hemisphere 159.4
1891 Female, age 85, both hemispheres 136.2
2436 Male, age 74, both hemispheres 129.1
2861 Female, age 67, both hemispheres 119.0
2620 Female, age 94, left hemisphere 113.2
Parahippocampal cortex
nTPM: 133.5
2018 Male, age 76, both hemispheres 148.5
1850 Male, age 80, both hemispheres 144.9
2245 Female, age 91, both hemispheres 140.2
1933 Female, age 85, both hemispheres 138.2
1990 Female, age 91, right hemisphere 133.6
2532 Female, age 72, left hemisphere 131.4
2692 Male, age 74, both hemispheres 129.4
2250 Female, age 67, right hemisphere 128.1
2622 Female, age 67, right hemisphere 123.9
2693 Female, age 94, both hemispheres 116.3
Perirhinal gyrus
nTPM: 141.5
1847 Female, age 91, left hemisphere 159.0
1841 Female, age 85, right hemisphere 150.7
1794 Male, age 80, right hemisphere 144.2
2848 Male, age 76, right hemisphere 132.6
2521 Female, age 94, right hemisphere 121.0
Subiculum
nTPM: 139.8
2042 Male, age 76, both hemispheres 159.1
2438 Female, age 94, left hemisphere 147.6
1901 Male, age 80, both hemispheres 143.8
1977 Female, age 85, both hemispheres 139.2
2729 Female, age 91, right hemisphere 126.8
2619 Male, age 74, both hemispheres 122.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 195.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 195.4
Samples: 197

Max nTPM: 363.4
Min nTPM: 104.8
Std nTPM: 51.1
Median nTPM: 189.9
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 363.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 339.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 327.4
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 314.8
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 304.8
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 297.7
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 296.4
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 295.5
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 291.8
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 283.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 279.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 401.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 401.0
FF:10169-103B7 60 years, female 537.8
FF:10153-102I9 76 years, female 264.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 29.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 29.4
Samples: 4

Max nTPM: 39.8
Min nTPM: 21.8
Sample A Female 39.8
Sample B Female 28.3
Sample C Male 27.6
Sample D Male 21.8
Entorhinal cortex
nTPM: 20.7
Samples: 4

Max nTPM: 22.9
Min nTPM: 18.2
Sample A Female 21.5
Sample B Female 22.9
Sample C Male 20.0
Sample D Male 18.2
Subiculum
nTPM: 22.7
Samples: 4

Max nTPM: 27.5
Min nTPM: 20.3
Sample A Female 27.5
Sample B Female 22.1
Sample C Male 20.8
Sample D Male 20.3
Ventral hippocampus
nTPM: 27.7
Samples: 4

Max nTPM: 32.2
Min nTPM: 19.8
Sample A Female 31.7
Sample B Female 19.8
Sample C Male 32.2
Sample D Male 27.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 22.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 17.6
Samples: 4

Max nTPM: 19.8
Min nTPM: 15.5
Sample A Male 19.8
Sample B Male 16.4
Sample C Female 15.5
Sample D Female 18.7
Hippocampal formation
nTPM: 22.0
Samples: 4

Max nTPM: 24.7
Min nTPM: 20.3
Sample A Male 21.6
Sample B Male 21.2
Sample C Female 24.7
Sample D Female 20.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.4
75990507 Antisense, RP_060608_01_C09, Mouse strain C57BL/6J (56 days, male) 0.4

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