HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:24.2 nTPM
HPA:24.2 nTPM
GTEx:47.2 nTPM
FANTOM5:59.4 Scaled Tags Per Million
Pig:35.0 nTPM
Mouse:149.7 nTPM
Allen mouse:10.8 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 24.2
Sample id Sample description nTPM
Hippocampus
nTPM: 24.2
1898 Male, age 80, left hemisphere 32.7
1855 Male, age 76, left hemisphere 28.0
2529 Female, age 94, left hemisphere 25.6
1911 Female, age 85, right hemisphere 20.3
2621 Female, age 67, right hemisphere 20.1
2148 Female, age 91, left hemisphere 18.8
Dentate gyrus
nTPM: 20.2
2010 Male, age 76, both hemispheres 22.3
2246 Female, age 85, both hemispheres 22.0
2530 Female, age 94, left hemisphere 20.1
2528 Male, age 74, both hemispheres 19.8
2531 Female, age 67, both hemispheres 19.1
1927 Female, age 91, both hemispheres 18.1
Entorhinal gyrus
nTPM: 19.1
2117 Female, age 91, right hemisphere 20.6
1938 Female, age 85, left hemisphere 19.5
2764 Male, age 80, right hemisphere 19.5
1787 Male, age 76, left hemisphere 19.4
2613 Female, age 94, left hemisphere 18.0
2686 Male, age 75, right hemisphere 17.8
Hippocampus, CA1
nTPM: 22.4
2749 Male, age 80, left hemisphere 25.3
2527 Male, age 74, both hemispheres 24.1
2082 Female, age 91, right hemisphere 23.0
2045 Male, age 76, both hemispheres 19.8
1873 Female, age 85, both hemispheres 19.6
Hippocampus, CA2
nTPM: 22.0
1892 Male, age 76, both hemispheres 24.7
2113 Female, age 91, right hemisphere 23.7
2437 Female, age 94, left hemisphere 22.7
2249 Male, age 74, both hemispheres 21.5
1963 Male, age 80, left hemisphere 20.2
1940 Female, age 85, left hemisphere 19.0
Hippocampus, CA3
nTPM: 21.8
1867 Male, age 76, both hemispheres 25.3
2137 Male, age 80, left hemisphere 24.4
2436 Male, age 74, both hemispheres 22.8
2861 Female, age 67, both hemispheres 21.2
1891 Female, age 85, both hemispheres 20.9
2620 Female, age 94, left hemisphere 16.3
Parahippocampal cortex
nTPM: 20.4
2018 Male, age 76, both hemispheres 26.0
2250 Female, age 67, right hemisphere 22.3
2245 Female, age 91, both hemispheres 20.8
1933 Female, age 85, both hemispheres 20.2
1990 Female, age 91, right hemisphere 19.7
2692 Male, age 74, both hemispheres 19.7
2622 Female, age 67, right hemisphere 19.5
2532 Female, age 72, left hemisphere 19.1
2693 Female, age 94, both hemispheres 18.2
1850 Male, age 80, both hemispheres 18.1
Perirhinal gyrus
nTPM: 19.2
1847 Female, age 91, left hemisphere 22.9
2521 Female, age 94, right hemisphere 19.2
1794 Male, age 80, right hemisphere 18.4
2848 Male, age 76, right hemisphere 18.0
1841 Female, age 85, right hemisphere 17.4
Subiculum
nTPM: 22.5
2438 Female, age 94, left hemisphere 25.6
1901 Male, age 80, both hemispheres 25.0
2042 Male, age 76, both hemispheres 22.2
1977 Female, age 85, both hemispheres 22.1
2729 Female, age 91, right hemisphere 20.7
2619 Male, age 74, both hemispheres 19.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 47.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 47.2
Samples: 197

Max nTPM: 158.6
Min nTPM: 8.9
Std nTPM: 27.7
Median nTPM: 39.9
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 158.6
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 146.6
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 142.6
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 138.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 137.7
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 133.0
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 119.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 116.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 115.3
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 110.9
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 102.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 59.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 59.4
FF:10169-103B7 60 years, female 79.5
FF:10153-102I9 76 years, female 39.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 35.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 13.8
Samples: 4

Max nTPM: 26.5
Min nTPM: 6.2
Sample A Female 15.7
Sample B Female 6.8
Sample C Male 26.5
Sample D Male 6.2
Entorhinal cortex
nTPM: 10.2
Samples: 4

Max nTPM: 11.0
Min nTPM: 9.3
Sample A Female 9.3
Sample B Female 10.5
Sample C Male 11.0
Sample D Male 9.9
Subiculum
nTPM: 35.1
Samples: 4

Max nTPM: 59.3
Min nTPM: 20.3
Sample A Female 59.3
Sample B Female 31.5
Sample C Male 29.1
Sample D Male 20.3
Ventral hippocampus
nTPM: 14.0
Samples: 4

Max nTPM: 19.2
Min nTPM: 8.5
Sample A Female 8.5
Sample B Female 12.6
Sample C Male 19.2
Sample D Male 15.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 149.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 149.7
Samples: 4

Max nTPM: 186.4
Min nTPM: 122.8
Sample A Male 122.8
Sample B Male 123.5
Sample C Female 166.2
Sample D Female 186.4
Hippocampal formation
nTPM: 113.1
Samples: 4

Max nTPM: 136.0
Min nTPM: 94.0
Sample A Male 136.0
Sample B Male 94.0
Sample C Female 105.2
Sample D Female 117.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 10.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.8
70430708 Antisense, RP_050614_01_H06, Mouse strain C57BL/6J (56 days, male) 10.8
72008305 Antisense, RP_050614_01_H06, Mouse strain C57BL/6J (56 days, male) 5.4

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The Human Protein Atlas

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