HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:35.8 nTPM
HPA:35.8 nTPM
GTEx:32.0 nTPM
FANTOM5:59.5 Scaled Tags Per Million
Pig:14.5 nTPM
Mouse:391.6 nTPM
Allen mouse:6.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041173
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 35.8
Sample id Sample description nTPM
Hippocampus
nTPM: 35.8
1898 Male, age 80, left hemisphere 38.2
2529 Female, age 94, left hemisphere 36.9
1855 Male, age 76, left hemisphere 35.4
2148 Female, age 91, left hemisphere 34.8
2621 Female, age 67, right hemisphere 34.8
1911 Female, age 85, right hemisphere 34.4
Dentate gyrus
nTPM: 34.6
2010 Male, age 76, both hemispheres 36.3
1927 Female, age 91, both hemispheres 34.9
2528 Male, age 74, both hemispheres 34.7
2530 Female, age 94, left hemisphere 34.2
2531 Female, age 67, both hemispheres 34.0
2246 Female, age 85, both hemispheres 33.9
Entorhinal gyrus
nTPM: 34.3
1938 Female, age 85, left hemisphere 34.8
2686 Male, age 75, right hemisphere 34.8
1787 Male, age 76, left hemisphere 34.3
2117 Female, age 91, right hemisphere 34.3
2764 Male, age 80, right hemisphere 34.1
2613 Female, age 94, left hemisphere 33.3
Hippocampus, CA1
nTPM: 35.5
2749 Male, age 80, left hemisphere 38.0
1873 Female, age 85, both hemispheres 35.2
2045 Male, age 76, both hemispheres 35.2
2527 Male, age 74, both hemispheres 35.1
2082 Female, age 91, right hemisphere 33.8
Hippocampus, CA2
nTPM: 35.2
1963 Male, age 80, left hemisphere 37.7
1892 Male, age 76, both hemispheres 35.8
2249 Male, age 74, both hemispheres 34.7
1940 Female, age 85, left hemisphere 34.4
2113 Female, age 91, right hemisphere 34.3
2437 Female, age 94, left hemisphere 34.3
Hippocampus, CA3
nTPM: 34.9
1867 Male, age 76, both hemispheres 36.5
2137 Male, age 80, left hemisphere 35.8
2436 Male, age 74, both hemispheres 34.9
1891 Female, age 85, both hemispheres 34.3
2620 Female, age 94, left hemisphere 34.1
2861 Female, age 67, both hemispheres 33.8
Parahippocampal cortex
nTPM: 34.2
2018 Male, age 76, both hemispheres 35.6
1933 Female, age 85, both hemispheres 35.1
1850 Male, age 80, both hemispheres 34.6
2250 Female, age 67, right hemisphere 34.5
2532 Female, age 72, left hemisphere 34.4
2245 Female, age 91, both hemispheres 34.1
2693 Female, age 94, both hemispheres 34.0
2692 Male, age 74, both hemispheres 33.8
2622 Female, age 67, right hemisphere 33.3
1990 Female, age 91, right hemisphere 33.0
Perirhinal gyrus
nTPM: 34.6
1794 Male, age 80, right hemisphere 35.5
1841 Female, age 85, right hemisphere 35.1
1847 Female, age 91, left hemisphere 34.9
2521 Female, age 94, right hemisphere 34.2
2848 Male, age 76, right hemisphere 33.3
Subiculum
nTPM: 34.1
1901 Male, age 80, both hemispheres 35.4
1977 Female, age 85, both hemispheres 35.2
2042 Male, age 76, both hemispheres 34.3
2619 Male, age 74, both hemispheres 33.8
2729 Female, age 91, right hemisphere 33.6
2438 Female, age 94, left hemisphere 32.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 32.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 32.0
Samples: 197

Max nTPM: 77.7
Min nTPM: 11.4
Std nTPM: 9.3
Median nTPM: 30.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 77.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 65.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 60.4
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 56.1
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 55.8
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 54.9
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 54.3
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 53.7
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 53.5
GTEX-131YS-0011-R1a-SM-5DUXC 60-69 years, female 49.3
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 49.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 59.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 59.5
FF:10169-103B7 60 years, female 68.0
FF:10153-102I9 76 years, female 51.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 14.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 14.5
Samples: 4

Max nTPM: 17.1
Min nTPM: 11.6
Sample A Female 17.1
Sample B Female 13.5
Sample C Male 15.7
Sample D Male 11.6
Entorhinal cortex
nTPM: 14.0
Samples: 4

Max nTPM: 17.0
Min nTPM: 11.2
Sample A Female 13.8
Sample B Female 17.0
Sample C Male 13.9
Sample D Male 11.2
Subiculum
nTPM: 12.7
Samples: 4

Max nTPM: 17.2
Min nTPM: 10.9
Sample A Female 17.2
Sample B Female 11.4
Sample C Male 11.3
Sample D Male 10.9
Ventral hippocampus
nTPM: 12.9
Samples: 4

Max nTPM: 14.1
Min nTPM: 11.1
Sample A Female 12.5
Sample B Female 11.1
Sample C Male 13.7
Sample D Male 14.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 391.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 373.2
Samples: 4

Max nTPM: 396.1
Min nTPM: 348.6
Sample A Male 358.1
Sample B Male 389.8
Sample C Female 396.1
Sample D Female 348.6
Hippocampal formation
nTPM: 391.6
Samples: 4

Max nTPM: 456.7
Min nTPM: 350.8
Sample A Male 456.7
Sample B Male 350.8
Sample C Female 394.2
Sample D Female 364.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.5
100144401 Antisense, RP_110407_01_H01, Mouse strain C57BL/6J (56 days, male) 6.5

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